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7VDP
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BU of 7vdp by Molmil
The structure of cyclin-dependent kinase 5 (CDK5) in complex with p25 and Compound 1
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Cyclin-dependent kinase 5 activator 1, ...
著者Malojcic, G, Clugston, S.L, Daniels, M, Harmange, J.C, Ledeborer, M.
登録日2021-09-07
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Discovery and Optimization of Highly Selective Inhibitors of CDK5.
J.Med.Chem., 65, 2022
5IYY
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BU of 5iyy by Molmil
X-ray structure of neuropilin-1 b1 domain complexed with Arg-4 ligand.
分子名称: Neuropilin-1, N~2~-[(benzyloxy)carbonyl]-L-arginine
著者Fotinou, C, Rana, R, Djordjevic, S, Yelland, T.
登録日2016-03-24
公開日2017-04-05
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Architecture and hydration of the arginine-binding site of neuropilin-1.
FEBS J., 285, 2018
3LAS
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BU of 3las by Molmil
Crystal structure of carbonic anhydrase from streptococcus mutans to 1.4 angstrom resolution
分子名称: GLYCEROL, GUANIDINE, MAGNESIUM ION, ...
著者Ma, L.-L, Wang, K.-T, Liu, X, Su, X.-D.
登録日2010-01-07
公開日2011-01-12
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of carbonic anhydrase from streptococcus mutans to 1.4 angstrom resolution
To be published
8B0W
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BU of 8b0w by Molmil
Galectin-1 in Complex with Ligand MG49
分子名称: BETA-MERCAPTOETHANOL, Galectin-1, SULFATE ION, ...
著者Grimm, C, Mut, J, Seibel, J.
登録日2022-09-08
公開日2023-09-20
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Galectin-1 in Complex with Ligand MG49
To Be Published
8IY5
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BU of 8iy5 by Molmil
ETB-Gi complex bound to endothelin-1
分子名称: Endothelin type B receptor, Endothelin-1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Sano, F.K, Akasaka, H, Shihoya, W, Nureki, O.
登録日2023-04-04
公開日2023-08-16
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Cryo-EM structure of the endothelin-1-ET B -G i complex.
Elife, 12, 2023
8B0Z
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BU of 8b0z by Molmil
Galectin-1 in Complex with Ligand JM171
分子名称: BETA-MERCAPTOETHANOL, Galectin-1, SULFATE ION, ...
著者Grimm, C, Mut, J, Seibel, J.
登録日2022-09-08
公開日2023-09-20
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Galectin-1 in Complex with Ligand JM171
To Be Published
8OXC
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BU of 8oxc by Molmil
Cryo-EM structure of ATP8B1-CDC50A in E2-Pi conformation with occluded PI
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOINOSITOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Cell cycle control protein 50A, ...
著者Dieudonne, T, Kummerer, F, Juknaviciute Laursen, M, Stock, C, Kock Flygaard, R, Khalid, S, Lenoir, G, Lyons, J.A, Lindorff-Larsen, K, Nissen, P.
登録日2023-05-01
公開日2023-11-29
最終更新日2024-11-20
実験手法ELECTRON MICROSCOPY (2.58 Å)
主引用文献Activation and substrate specificity of the human P4-ATPase ATP8B1.
Nat Commun, 14, 2023
9CPH
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BU of 9cph by Molmil
Structural basis of BAK sequestration by MCL-1 and consequences for apoptosis initiation
分子名称: Bcl-2 homologous antagonist/killer, Induced myeloid leukemia cell differentiation protein Mcl-1, Synthetic antibody, ...
著者Uchikawa, E, Myasnikov, A, Dey, R, Moldoveanu, T.
登録日2024-07-18
公開日2025-06-04
実験手法ELECTRON MICROSCOPY (3.34 Å)
主引用文献Structural basis of BAK sequestration by MCL-1 in apoptosis.
Mol.Cell, 85, 2025
8FK5
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BU of 8fk5 by Molmil
Cryo-EM Structure of PG9RSH DU011 Fab in complex with BG505 DS-SOSIP.664
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ...
著者Gorman, J, Kwong, P.D.
登録日2022-12-20
公開日2023-05-31
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Improved HIV-1 neutralization breadth and potency of V2-apex antibodies by in silico design.
Cell Rep, 42, 2023
8FL1
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BU of 8fl1 by Molmil
Cryo-EM Structure of PG9RSH DU025 Fab in complex with BG505 DS-SOSIP.664
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ...
著者Gorman, J, Kwong, P.D.
登録日2022-12-21
公開日2023-05-31
最終更新日2024-11-20
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Improved HIV-1 neutralization breadth and potency of V2-apex antibodies by in silico design.
Cell Rep, 42, 2023
9G5I
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BU of 9g5i by Molmil
Cryo-EM structure of a 2:1 ALK:ALKAL2 complex obtained after re-processing of EMPIAR-10930 data
分子名称: ALK and LTK ligand 2, ALK tyrosine kinase receptor
著者Felix, J, De Munck, S, Bazan, J.F, Savvides, S.N.
登録日2024-07-17
公開日2025-03-12
最終更新日2025-04-23
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Reanalysis of cryo-EM data reveals ALK-cytokine assemblies with both 2:1 and 2:2 stoichiometries.
Plos Biol., 23, 2025
5J0D
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BU of 5j0d by Molmil
Crystal structure of the bromodomain of human CREBBP in complex with a benzoxazepine compound
分子名称: 1,2-ETHANEDIOL, 7-(3,5-dimethoxyphenyl)-N-[(3S)-1-methylpiperidin-3-yl]-4-propanoyl-2,3,4,5-tetrahydro-1,4-benzoxazepine-9-carboxamide, CREB-binding protein
著者Tallant, C, Popp, T.A, Fedorov, O, Siejka, P, Picaud, S, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bracher, F, Knapp, S, Structural Genomics Consortium (SGC)
登録日2016-03-28
公開日2016-10-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Development of Selective CBP/P300 Benzoxazepine Bromodomain Inhibitors.
J.Med.Chem., 59, 2016
8RB6
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BU of 8rb6 by Molmil
Structure of Aldo-Keto Reductase 1C3 (AKR1C3) in complex with an inhibitor M689, with the 3-hydroxy-benzoisoxazole moiety. Resolution 2.0A
分子名称: 1,2-ETHANEDIOL, 4-[[4-(3-hydroxyphenyl)phenyl]amino]-1,2-benzoxazol-3-ol, Aldo-keto reductase family 1 member C3, ...
著者Frydenvang, K, Mirza, O.A.
登録日2023-12-03
公開日2024-03-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-guided optimization of 3-hydroxybenzoisoxazole derivatives as inhibitors of Aldo-keto reductase 1C3 (AKR1C3) to target prostate cancer.
Eur.J.Med.Chem., 268, 2024
8UCC
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BU of 8ucc by Molmil
IRAK4 in complex with compound 20
分子名称: (4S)-2-[(1R,4s)-1-methyl-2-oxabicyclo[2.1.1]hexan-4-yl]-N-[(8S)-6-methylpyrazolo[1,5-a]pyrimidin-3-yl]-7-[(propan-2-yl)oxy]imidazo[1,2-a]pyrimidine-6-carboxamide, Interleukin-1 receptor-associated kinase 4
著者Metrick, C.M, Chodaparambil, J.V.
登録日2023-09-26
公開日2024-06-26
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Discovery of 7-Isopropoxy-2-(1-methyl-2-oxabicyclo[2.1.1]hexan-4-yl)- N -(6-methylpyrazolo[1,5- a ]pyrimidin-3-yl)imidazo[1,2- a ]pyrimidine-6-carboxamide (BIO-7488), a Potent, Selective, and CNS-Penetrant IRAK4 Inhibitor for the Treatment of Ischemic Stroke.
J.Med.Chem., 67, 2024
5B89
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BU of 5b89 by Molmil
Crystal structure of a Cysteine Desulfurase from Thermococcus onnurineus NA1 in complex with alanine at 1.5 Angstrom resolution
分子名称: 1,2-ETHANEDIOL, ALANINE, Cysteine desulfurase, ...
著者Ho, T.-H, Kang, L.-W.
登録日2016-06-13
公開日2017-06-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Catalytic Intermediate Crystal Structures of Cysteine Desulfurase from the ArchaeonThermococcus onnurineus NA1.
Archaea, 2017, 2017
5B06
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BU of 5b06 by Molmil
Lysozyme (denatured by NaOD and refolded)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
著者Kita, A, Morimoto, Y.
登録日2015-10-28
公開日2016-01-13
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献An Effective Deuterium Exchange Method for Neutron Crystal Structure Analysis with Unfolding-Refolding Processes
Mol Biotechnol., 58, 2016
7VB9
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BU of 7vb9 by Molmil
Rba sphaeroides PufY-KO RC-LH1 dimer type-2
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, ...
著者Bracun, L, Yamagata, A, Liu, L.N, Shirouzu, M.
登録日2021-08-30
公開日2022-05-04
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Structural basis for the assembly and quinone transport mechanisms of the dimeric photosynthetic RC-LH1 supercomplex.
Nat Commun, 13, 2022
8AAU
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BU of 8aau by Molmil
LIM Domain Kinase 1 (LIMK1) bound to LIMKi3
分子名称: 1,2-ETHANEDIOL, LIM domain kinase 1, MAGNESIUM ION, ...
著者Mathea, S, Salah, E, Hanke, T, Knapp, S.
登録日2022-07-03
公開日2022-08-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Development and Characterization of Type I, Type II, and Type III LIM-Kinase Chemical Probes.
J.Med.Chem., 65, 2022
3LP6
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BU of 3lp6 by Molmil
Crystal Structure of Rv3275c-E60A from Mycobacterium tuberculosis at 1.7A resolution
分子名称: FORMIC ACID, GLYCEROL, Phosphoribosylaminoimidazole carboxylase catalytic subunit
著者Kim, H, Yu, M, Hung, L.-W, Terwilliger, T.C, Kim, C.-Y, Integrated Center for Structure and Function Innovation (ISFI), TB Structural Genomics Consortium (TBSGC)
登録日2010-02-04
公開日2010-06-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.702 Å)
主引用文献Crystal Structure of Rv3275c-E60A from Mycobacterium tuberculosis at 1.7A Resolution
To be Published
8TX0
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BU of 8tx0 by Molmil
IRAK4 in complex with compound
分子名称: 1,2-ETHANEDIOL, Interleukin-1 receptor-associated kinase 4, SODIUM ION, ...
著者Metrick, C.M, Chodaparambil, J.V.
登録日2023-08-21
公開日2024-06-26
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of BIO-8169─A Highly Potent, Selective, and Brain-Penetrant IRAK4 Inhibitor for the Treatment of Neuroinflammation.
J.Med.Chem., 67, 2024
5J7A
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BU of 5j7a by Molmil
Bacteriorhodopsin ground state structure obtained with Serial Femtosecond Crystallography
分子名称: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, RETINAL
著者Nogly, P, Panneels, V, Nelson, G, Gati, C, Kimura, T, Milne, C, Milathianaki, D, Kubo, M, Wu, W, Conrad, C, Coe, J, Bean, R, Zhao, Y, Bath, P, Dods, R, Harimoorthy, R, Beyerlein, K.R, Rheinberger, J, James, D, DePonte, D, Li, C, Sala, L, Williams, G, Hunter, M, Koglin, J.E, Berntsen, P, Nango, E, Iwata, S, Chapman, H.N, Fromme, P, Frank, M, Abela, R, Boutet, S, Barty, A, White, T.A, Weierstall, U, Spence, J, Neutze, R, Schertler, G, Standfuss, J.
登録日2016-04-06
公開日2016-08-31
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Lipidic cubic phase injector is a viable crystal delivery system for time-resolved serial crystallography.
Nat Commun, 7, 2016
7NPZ
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BU of 7npz by Molmil
C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH (R)-N5-cyclopropyl-N3-methyl-2-oxo-1-(1-phenylethyl)-1,2-dihydropyridine-3,5-dicarboxamide
分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 2, ~{N}5-cyclopropyl-~{N}3-methyl-2-oxidanylidene-1-[(1~{R})-1-phenylethyl]pyridine-3,5-dicarboxamide
著者Chung, C.
登録日2021-02-28
公開日2021-07-21
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Identification of a Series of N -Methylpyridine-2-carboxamides as Potent and Selective Inhibitors of the Second Bromodomain (BD2) of the Bromo and Extra Terminal Domain (BET) Proteins.
J.Med.Chem., 64, 2021
5N7F
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BU of 5n7f by Molmil
MAGI-1 complexed with a pRSK1 peptide
分子名称: CALCIUM ION, GLYCEROL, Membrane-associated guanylate kinase, ...
著者Gogl, G, Nyitray, L.
登録日2017-02-20
公開日2017-11-08
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Dynamic control of RSK complexes by phosphoswitch-based regulation.
FEBS J., 285, 2018
6TZH
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BU of 6tzh by Molmil
ADC-7 in complex with boronic acid transition state inhibitor S06015
分子名称: Beta-lactamase, GLYCINE, PHOSPHATE ION, ...
著者Fish, E.R, Powers, R.A, Wallar, B.J.
登録日2019-08-12
公開日2020-06-24
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献1,2,3-Triazolylmethaneboronate: A Structure Activity Relationship Study of a Class of beta-Lactamase Inhibitors againstAcinetobacter baumanniiCephalosporinase.
Acs Infect Dis., 6, 2020
6DOP
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BU of 6dop by Molmil
Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 120 s at 21 C (dataset 1)
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*GP*AP*TP*GP*T)-3'), GLYCEROL, ...
著者Samara, N.L, Yang, W.
登録日2018-06-09
公開日2018-08-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol., 25, 2018

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