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5K57
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BU of 5k57 by Molmil
HDD domain from human Ddi2
分子名称: Protein DDI1 homolog 2
著者Veverka, V.
登録日2016-05-23
公開日2016-08-10
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Human DNA-Damage-Inducible 2 Protein Is Structurally and Functionally Distinct from Its Yeast Ortholog.
Sci Rep, 6, 2016
3TC3
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BU of 3tc3 by Molmil
Crystal Structure of SacUVDE
分子名称: MANGANESE (II) ION, UV damage endonuclease
著者Meulenbroek, E.M, Jala, I, Moolenaar, G.F, Goosen, N, Pannu, N.S.
登録日2011-08-08
公開日2012-11-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献UV damage endonuclease employs a novel dual-dinucleotide flipping mechanism to recognize different DNA lesions.
Nucleic Acids Res., 41, 2013
3IHU
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BU of 3ihu by Molmil
Crystal structure of DNA binding protein (YP_298823.1) from Ralstonia eutropha JMP134 at 1.92 A resolution
分子名称: CHLORIDE ION, GLYCEROL, Transcriptional regulator, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2009-07-30
公開日2009-08-11
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Crystal structure of DNA binding protein (YP_298823.1) from Ralstonia eutropha JMP134 at 1.92 A resolution
To be published
8OJ2
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BU of 8oj2 by Molmil
Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with protomor-like sequence IR7
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Auxin response factor, CHLORIDE ION, ...
著者Crespo, I, Weijers, D, Boer, D.R.
登録日2023-03-23
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with protomor-like sequence IR7
To Be Published
7UIM
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BU of 7uim by Molmil
CryoEM Structure of an Group II Intron Retroelement (apo-complex)
分子名称: AMMONIUM ION, E.r IIC Intron, Group II intron reverse transcriptase/maturase, ...
著者Chung, K, Xu, L.
登録日2022-03-29
公開日2022-11-23
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structures of a mobile intron retroelement poised to attack its structured DNA target
Science, 378, 2022
2GAI
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BU of 2gai by Molmil
Structure of Full Length Topoisomerase I from Thermotoga maritima in triclinic crystal form
分子名称: DNA topoisomerase I
著者Hansen, G.
登録日2006-03-08
公開日2006-04-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of Full Length Topoisomerase I from Thermotoga maritima
J.Mol.Biol., 358, 2006
4KFS
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BU of 4kfs by Molmil
Structure of the genome packaging NTPase B204 from Sulfolobus turreted icosahedral virus 2 in complex with AMP
分子名称: ADENOSINE MONOPHOSPHATE, CITRATE ANION, Genome packaging NTPase B204, ...
著者Happonen, L.J, Oksanen, E, Kajander, T, Goldman, A, Butcher, S.
登録日2013-04-27
公開日2013-05-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.946 Å)
主引用文献The Structure of the NTPase That Powers DNA Packaging into Sulfolobus Turreted Icosahedral Virus 2.
J.Virol., 87, 2013
1CUK
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BU of 1cuk by Molmil
ESCHERICHIA COLI RUVA PROTEIN AT PH 4.9 AND ROOM TEMPERATURE
分子名称: RUVA PROTEIN
著者Rafferty, J.B, Rice, D.W.
登録日1996-08-28
公開日1997-10-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of DNA recombination protein RuvA and a model for its binding to the Holliday junction.
Science, 274, 1996
6RZX
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BU of 6rzx by Molmil
Carbonic Anhydrase CAIX mimic in complex with inhibitor FBSA
分子名称: 1,1,2,2,3,3,4,4,4-nonakis(fluoranyl)butane-1-sulfonamide, Carbonic anhydrase 2, ZINC ION
著者Kugler, M, Brynda, J, Rezacova, P.
登録日2019-06-13
公開日2020-06-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Identification of Novel Carbonic Anhydrase IX Inhibitors Using High-Throughput Screening of Pooled Compound Libraries by DNA-Linked Inhibitor Antibody Assay (DIANA).
SLAS Discov, 25, 2020
4KFU
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BU of 4kfu by Molmil
Structure of the genome packaging NTPase B204 from Sulfolobus turreted icosahedral virus 2 in complex with AMPPCP
分子名称: CITRATE ANION, Genome packaging NTPase B204, MAGNESIUM ION, ...
著者Happonen, L.J, Oksanen, E, Kajander, T, Goldman, A, Butcher, S.
登録日2013-04-27
公開日2013-05-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.892 Å)
主引用文献The Structure of the NTPase That Powers DNA Packaging into Sulfolobus Turreted Icosahedral Virus 2.
J.Virol., 87, 2013
8SJ2
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BU of 8sj2 by Molmil
Structure of ternary complex of cGAS with dsDNA and bound ATP and 2'-dGTP
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cyclic GMP-AMP synthase, ...
著者Wu, S, Sohn, J.
登録日2023-04-17
公開日2024-04-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献The structural basis for 2'-5'/3'-5'-cGAMP synthesis by cGAS.
Nat Commun, 15, 2024
8SJ0
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BU of 8sj0 by Molmil
Structure of ternary complex of cGAS with dsDNA and bound 2'-dATP
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, Cyclic GMP-AMP synthase, MAGNESIUM ION, ...
著者Wu, S, Sohn, J.
登録日2023-04-17
公開日2024-04-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献The structural basis for 2'-5'/3'-5'-cGAMP synthesis by cGAS.
Nat Commun, 15, 2024
8SJ1
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BU of 8sj1 by Molmil
Structure of ternary complex of cGAS with dsDNA and bound 3'-dATP
分子名称: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, Cyclic GMP-AMP synthase, MAGNESIUM ION, ...
著者Wu, S, Sohn, J.
登録日2023-04-17
公開日2024-04-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献The structural basis for 2'-5'/3'-5'-cGAMP synthesis by cGAS.
Nat Commun, 15, 2024
8DK1
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BU of 8dk1 by Molmil
CryoEM structure of JetABC (head construct) from Pseudomonas aeruginosa PA14
分子名称: JetA, JetB, JetC
著者Deep, A, Gu, Y, Gao, Y, Ego, K, Herzik, M, Zhou, H, Corbett, K.
登録日2022-07-01
公開日2022-10-05
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献The SMC-family Wadjet complex protects bacteria from plasmid transformation by recognition and cleavage of closed-circular DNA.
Mol.Cell, 82, 2022
3NWT
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BU of 3nwt by Molmil
Crystal structure of the N-terminal domain of the yeast telomere-binding and telomerase regulatory protein Cdc13
分子名称: Cell division control protein 13
著者Mitchell, M.T, Smith, J.S, Mason, M, Harper, S, Speicher, D.W, Johnson, F.B, Skordalakes, E.
登録日2010-07-10
公開日2010-09-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Cdc13 N-terminal dimerization, DNA binding, and telomere length regulation.
Mol.Cell.Biol., 30, 2010
1B62
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BU of 1b62 by Molmil
MUTL COMPLEXED WITH ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PROTEIN (MUTL)
著者Wei, Y.
登録日1999-01-11
公開日1999-04-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Transformation of MutL by ATP binding and hydrolysis: a switch in DNA mismatch repair.
Cell(Cambridge,Mass.), 97, 1999
5HS4
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BU of 5hs4 by Molmil
Plasmdoium Vivax Lactate dehydrogenase
分子名称: L-lactate dehydrogenase
著者Choi, S.J, Ban, C.
登録日2016-01-25
公開日2016-10-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.339 Å)
主引用文献Crystal structure of a DNA aptamer bound to PvLDH elucidates novel single-stranded DNA structural elements for folding and recognition
Sci Rep, 6, 2016
3NWS
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BU of 3nws by Molmil
Crystal structure of the N-terminal domain of the yeast telomere-binding and telomerase regulatory protein Cdc13
分子名称: Cell division control protein 13
著者Mitchell, M.T, Smith, J.S, Mason, M, Harper, S, Speicher, D.W, Johnson, F.B, Skordalakes, E.
登録日2010-07-10
公開日2010-09-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Cdc13 N-terminal dimerization, DNA binding, and telomere length regulation.
Mol.Cell.Biol., 30, 2010
2B3E
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BU of 2b3e by Molmil
Crystal structure of DB819-D(CGCGAATTCGCG)2 complex.
分子名称: 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', 6-(4,5-DIHYDRO-1H-IMIDAZOL-2-YL)-2-{5-[4-(4,5-DIHYDRO-1H-IMIDAZOL-2-YL)PHENYL]THIEN-2-YL}-1H-BENZIMIDAZOLE, MAGNESIUM ION
著者Campbell, N.H, Evans, D.A, Lee, M.P, Parkinson, G.N, Neidle, S.
登録日2005-09-20
公開日2005-11-22
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Targeting the DNA minor groove with fused ring dicationic compounds: Comparison of in silico screening and a high-resolution crystal structure.
Bioorg.Med.Chem.Lett., 16, 2006
5V0A
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BU of 5v0a by Molmil
Crystal structure of human exonuclease 1 Exo1 (D225A) in complex with 5' recessed-end DNA (rVIII)
分子名称: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, DNA (5'-D(*CP*GP*CP*TP*AP*GP*TP*CP*GP*TP*CP*AP*T)-3'), DNA (5'-D(P*CP*GP*AP*CP*TP*AP*GP*CP*G)-3'), ...
著者Shi, Y, Beese, L.S.
登録日2017-02-28
公開日2017-05-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Interplay of catalysis, fidelity, threading, and processivity in the exo- and endonucleolytic reactions of human exonuclease I.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4PU5
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BU of 4pu5 by Molmil
Shewanella oneidensis Toxin Antitoxin System Toxin Protein HipA Bound with AMPPNP and Mg
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SODIUM ION, ...
著者Wen, Y, Behiels, E, Felix, J, Elegheert, J, Vergauwen, B, Devreese, B, Savvides, S.
登録日2014-03-12
公開日2014-08-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.834 Å)
主引用文献The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence.
Nucleic Acids Res., 42, 2014
4KFT
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BU of 4kft by Molmil
Structure of the genome packaging NTPase B204 from Sulfolobus turreted icosahedral virus 2 in complex with ATP-gammaS
分子名称: CHLORIDE ION, CITRATE ANION, Genome packaging NTPase B204, ...
著者Happonen, L.J, Oksanen, E, Kajander, T, Goldman, A, Butcher, S.
登録日2013-04-27
公開日2013-05-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.241 Å)
主引用文献The Structure of the NTPase That Powers DNA Packaging into Sulfolobus Turreted Icosahedral Virus 2.
J.Virol., 87, 2013
4Q10
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BU of 4q10 by Molmil
The catalytic core of Rad2 in complex with DNA substrate (complex IV)
分子名称: CALCIUM ION, DNA (5'-D(*TP*TP*TP*TP*CP*TP*GP*AP*GP*AP*CP*AP*AP*GP*GP*GP*AP*GP*CP*TP*TP*TP*T)-3'), DNA (5'-D(*TP*TP*TP*TP*GP*CP*TP*CP*CP*CP*TP*TP*GP*TP*CP*TP*CP*AP*GP*TP*TP*TP*T)-3'), ...
著者Mietus, M, Nowak, E, Jaciuk, M, Kustosz, P, Nowotny, M.
登録日2014-04-02
公開日2014-08-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of the catalytic core of Rad2: insights into the mechanism of substrate binding.
Nucleic Acids Res., 42, 2014
2YGK
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BU of 2ygk by Molmil
Crystal structure of the NurA nuclease from Sulfolobus solfataricus
分子名称: MANGANESE (II) ION, NURA
著者Rzechorzek, N.J, Blackwood, J.K, Abrams, A.S, Maman, J.D, Robinson, N.P, Pellegrini, L.
登録日2011-04-18
公開日2011-12-14
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and Functional Insights Into DNA-End Processing by the Archaeal Hera Helicase-Nura Nuclease Complex.
Nucleic Acids Res., 40, 2012
2KVH
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BU of 2kvh by Molmil
Structure of the three-Cys2His2 domain of mouse testis zinc finger protein
分子名称: ZINC ION, Zinc finger and BTB domain-containing protein 32
著者Chou, C.-C, Lou, Y.-C, Chen, C.
登録日2010-03-15
公開日2010-04-14
最終更新日2019-12-25
実験手法SOLUTION NMR
主引用文献Structure and DNA binding characteristics of the three-Cys(2)His(2) domain of mouse testis zinc finger protein.
Proteins, 78, 2010

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