PDB: 41522 件ウェブページステータス検索Chemie searchBIRD

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2ZXP	Crystal structure of RecJ in complex with Mn2+ from Thermus thermophilus HB8 分子名称: MANGANESE (II) ION, Single-stranded DNA specific exonuclease RecJ 著者 Wakamatsu, T, Kitamura, Y, Nakagawa, N, Masui, R, Kuramitsu, S. 登録日 2009-01-05 公開日 2010-01-05 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of RecJ exonuclease defines its specificity for single-stranded DNA J.Biol.Chem., 285, 2010
5C12	Nuclease domain of the large terminase subunit gp2 of bacterial virus Sf6 分子名称: Gene 2 protein, MAGNESIUM ION 著者 Zhao, H, Tang, L. 登録日 2015-06-12 公開日 2015-10-21 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.517 Å) 主引用文献 Two distinct modes of metal ion binding in the nuclease active site of a viral DNA-packaging terminase: insight into the two-metal-ion catalytic mechanism. Nucleic Acids Res., 43, 2015
5OFB	Crystal structure of human MORC2 (residues 1-603) with spinal muscular atrophy mutation S87L 分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, MORC family CW-type zinc finger protein 2, ... 著者 Douse, C.H, Liu, Y, Modis, Y. 登録日 2017-07-10 公開日 2018-02-14 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 Neuropathic MORC2 mutations perturb GHKL ATPase dimerization dynamics and epigenetic silencing by multiple structural mechanisms. Nat Commun, 9, 2018
1PIE	Crystal Structure of Lactococcus lactis Galactokinase Complexed with Galactose 分子名称: Galactokinase, PHOSPHATE ION, alpha-D-galactopyranose 著者 Thoden, J.B, Holden, H.M. 登録日 2003-05-30 公開日 2003-09-23 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Molecular Structure of Galactokinase J.Biol.Chem., 278, 2003
2YF4	Crystal structure of DR2231, the MazG-like protein from Deinococcus radiodurans, Apo structure 分子名称: GLYCEROL, MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE, SULFATE ION 著者 Goncalves, A.M.D, deSanctis, D, McSweeney, S.M. 登録日 2011-04-01 公開日 2011-07-06 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural and Functional Insights Into Dr2231 Protein, the Mazg-Like Nucleoside Triphosphate Pyrophosphohydrolase from Deinococcus Radiodurans. J.Biol.Chem., 286, 2011
2YFD	STRUCTURAL AND FUNCTIONAL INSIGHTS OF DR2231 PROTEIN, THE MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM DEINOCOCCUS RADIODURANS, COMPLEXED WITH Mg and dUMP 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, ACETATE ION, CHLORIDE ION, ... 著者 Goncalves, A.M.D, De Sanctis, D, Mcsweeney, S.M. 登録日 2011-04-05 公開日 2011-07-06 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.767 Å) 主引用文献 Structural and Functional Insights Into Dr2231 Protein, the Mazg-Like Nucleoside Triphosphate Pyrophosphohydrolase from Deinococcus Radiodurans. J.Biol.Chem., 286, 2011
8GDY	Crystal structure of the human PDI first domain with 9 mutations 分子名称: 1,2-ETHANEDIOL, Protein disulfide-isomerase, THIOCYANATE ION 著者 Forouhar, F, Banayan, N.E, Loughlin, B.L, Singh, S, Wong, V, Hunt, H.S, Handelman, S.K, Price, N, Hunt, J.F. 登録日 2023-03-06 公開日 2024-01-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Systematic enhancement of protein crystallization efficiency by bulk lysine-to-arginine (KR) substitution. Protein Sci., 33, 2024
3OPZ	Crystal structure of trans-sialidase in complex with the Fab fragment of a neutralizing monoclonal IgG antibody 分子名称: 1,4-DIETHYLENE DIOXIDE, SODIUM ION, Trans-sialidase, ... 著者 Larrieux, N, Muia, R, Campetella, O, Buschiazzo, A. 登録日 2010-09-02 公開日 2011-11-09 最終更新日 2021-10-06 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Trypanosoma cruzi trans-sialidase in complex with a neutralizing antibody: structure/function studies towards the rational design of inhibitors. Plos Pathog., 8, 2012
8GDU	Crystal structure of a mutant methyl transferase from Methanosarcina acetivorans, Northeast Structural Genomics Consortium (NESG) Target MvR53-11M 分子名称: Methyltransferase domain-containing protein, S-ADENOSYL-L-HOMOCYSTEINE 著者 Forouhar, F, Banayan, N.E, Loughlin, B.L, Singh, S, Wong, V, Hunt, H.S, Handelman, S.K, Price, N, Hunt, J.F. 登録日 2023-03-06 公開日 2024-01-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Systematic enhancement of protein crystallization efficiency by bulk lysine-to-arginine (KR) substitution. Protein Sci., 33, 2024
2YF3	Crystal structure of DR2231, the MazG-like protein from Deinococcus radiodurans, complex with manganese 分子名称: GLYCEROL, MANGANESE (II) ION, MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE, ... 著者 Goncalves, A.M.D, deSanctis, D, McSweeney, S.M. 登録日 2011-04-01 公開日 2011-07-06 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural and Functional Insights Into Dr2231 Protein, the Mazg-Like Nucleoside Triphosphate Pyrophosphohydrolase from Deinococcus Radiodurans. J.Biol.Chem., 286, 2011
2YF9	STRUCTURAL AND FUNCTIONAL INSIGHTS OF DR2231 PROTEIN, THE MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM DEINOCOCCUS RADIODURANS, NATIVE FORM 分子名称: CHLORIDE ION, MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE 著者 Goncalves, A.M.D, De Sanctis, D, Mcsweeney, S.M. 登録日 2011-04-04 公開日 2011-07-06 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.899 Å) 主引用文献 Structural and Functional Insights Into Dr2231 Protein, the Mazg-Like Nucleoside Triphosphate Pyrophosphohydrolase from Deinococcus Radiodurans. J.Biol.Chem., 286, 2011
3P3I	Crystal structure of the F36A mutant of the fluoroacetyl-CoA-specific thioesterase FlK in complex with fluoroacetate and CoA 分子名称: COENZYME A, Fluoroacetyl coenzyme A thioesterase, fluoroacetic acid 著者 Weeks, A.M, Coyle, S.M, Jinek, M, Doudna, J.A, Chang, M.C.Y. 登録日 2010-10-04 公開日 2010-10-20 最終更新日 2011-11-16 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural and biochemical studies of a fluoroacetyl-CoA-specific thioesterase reveal a molecular basis for fluorine selectivity. Biochemistry, 49, 2010
3F7J	B.subtilis YvgN 分子名称: NITRATE ION, POTASSIUM ION, YvgN protein 著者 Zhou, Y.F, Lei, J, Liang, Y.H, Su, X.-D. 登録日 2008-11-09 公開日 2008-11-25 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural and biochemical analyses of YvgN and YtbE from Bacillus subtilis Protein Sci., 18, 2009
3FEC	Crystal structure of human Glutamate Carboxypeptidase III (GCPIII/NAALADase II), pseudo-unliganded 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, ... 著者 Barinka, C, Lubkowski, J, Hlouchova, K. 登録日 2008-11-28 公開日 2009-08-25 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 Structural insight into the evolutionary and pharmacologic homology of glutamate carboxypeptidases II and III Febs J., 276, 2009
5C2F	K428A mutant nuclease domain of the large terminase subunit gp2 of bacterial virus Sf6 with Manganese and beta-thujaplicinol 分子名称: 2,7-dihydroxy-4-(propan-2-yl)cyclohepta-2,4,6-trien-1-one, Gene 2 protein, MANGANESE (II) ION 著者 Zhao, H, Tang, L. 登録日 2015-06-15 公開日 2015-10-21 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Two distinct modes of metal ion binding in the nuclease active site of a viral DNA-packaging terminase: insight into the two-metal-ion catalytic mechanism. Nucleic Acids Res., 43, 2015
1XJB	Crystal structure of human type 3 3alpha-hydroxysteroid dehydrogenase in complex with NADP(H), citrate and acetate molecules 分子名称: 1,2-ETHANEDIOL, ACETATE ION, Aldo-keto reductase family 1 member C2, ... 著者 Couture, J.-F, Pereira de Jesus-Tran, K, Roy, A.-M, Legrand, P, Cantin, L, Cote, P.-L, Luu-The, V, Labrie, F, Breton, R. 登録日 2004-09-23 公開日 2005-06-21 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Comparison of crystal structures of human type 3 3alpha-hydroxysteroid dehydrogenase reveals an "induced-fit" mechanism and a conserved basic motif involved in the binding of androgen Protein Sci., 14, 2005
1S7F	RimL- Ribosomal L7/L12 alpha-N-protein acetyltransferase crystal form I (apo) 分子名称: CHLORIDE ION, MALONIC ACID, acetyl transferase 著者 Vetting, M.W, de Carvalho, L.P, Roderick, S.L, Blanchard, J.S. 登録日 2004-01-29 公開日 2005-03-15 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 A novel dimeric structure of the RimL Nalpha-acetyltransferase from Salmonella typhimurium. J.Biol.Chem., 280, 2005
1NGN	Mismatch repair in methylated DNA. Structure of the mismatch-specific thymine glycosylase domain of methyl-CpG-binding protein MBD4 分子名称: methyl-CpG binding protein MBD4 著者 Wu, P, Qiu, C, Sohail, A, Zhang, X, Bhagwat, A.S, Cheng, X. 登録日 2002-12-17 公開日 2003-03-18 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Mismatch repair in methylated DNA. Structure and activity of the mismatch-specific thymine glycosylase domain of methyl-CpG-binding protein MBD4 J.Biol.Chem., 278, 2003
1NGK	Crystallographic Structure of Mycobacterium tuberculosis Hemoglobin O 分子名称: CYANIDE ION, Hemoglobin-like protein HbO, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Milani, M, Savard, P.-Y, Oullet, H, Ascenzi, P, Guertin, M, Bolognesi, M. 登録日 2002-12-17 公開日 2003-05-20 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.11 Å) 主引用文献 A TyrCD1/TrpG8 hydrogen bond network and a TyrB10-TyrCD1 covalent link shape the heme distal site of Mycobacterium tuberculosis hemoglobin O Proc.Natl.Acad.Sci.USA, 100, 2003
5O8O	N. crassa Tom40 model based on cryo-EM structure of the TOM core complex at 6.8 A 分子名称: Mitochondrial import receptor subunit tom40 著者 Bausewein, T, Mills, D.J, Nussberger, S, Nitschke, B, Kuehlbrandt, W. 登録日 2017-06-13 公開日 2017-08-16 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (6.8 Å) 主引用文献 Cryo-EM Structure of the TOM Core Complex from Neurospora crassa. Cell, 170, 2017
3MDU	The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-Guanidino-L-Glutamate 分子名称: GLYCEROL, N-carbamimidoyl-L-glutamic acid, N-formimino-L-Glutamate Iminohydrolase, ... 著者 Fedorov, A.A, Fedorov, E.V, Marti-Arbona, R, Raushel, F.M, Almo, S.C. 登録日 2010-03-30 公開日 2011-03-09 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.4003 Å) 主引用文献 Structure of N-Formimino-l-glutamate Iminohydrolase from Pseudomonas aeruginosa. Biochemistry, 54, 2015
1S7L	RimL- Ribosomal L7/L12 alpha-N-protein acetyltransferase in complex with Coenzyme A (CoA-Cys134 Disulfide) 分子名称: COENZYME A, SULFATE ION, acetyl transferase 著者 Vetting, M.W, de Carvalho, L.P, Roderick, S.L, Blanchard, J.S. 登録日 2004-01-29 公開日 2005-03-15 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 A novel dimeric structure of the RimL Nalpha-acetyltransferase from Salmonella typhimurium. J.Biol.Chem., 280, 2005
1OXM	STRUCTURE OF CUTINASE 分子名称: BUTYL-PHOSPHINIC ACID 2,3-BIS-BUTYLCARBAMOYLOXY-PROPYL ESTER GROUP, CUTINASE 著者 Longhi, S, Cambillau, C. 登録日 1996-10-26 公開日 1997-05-15 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of cutinase covalently inhibited by a triglyceride analogue. Protein Sci., 6, 1997
3MKH	Podospora anserina Nitroalkane Oxidase 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, NITROALKANE OXIDASE, ... 著者 Tormos, J.R, Taylor, A.B, Daubner, S.C, Hart, P.J, Fitzpatrick, P.F. 登録日 2010-04-14 公開日 2010-06-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.995 Å) 主引用文献 Identification of a hypothetical protein from Podospora anserina as a nitroalkane oxidase. Biochemistry, 49, 2010
5FFG	Crystal structure of integrin alpha V beta 6 head 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Dong, X, Springer, T.A. 登録日 2015-12-18 公開日 2017-01-25 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Force interacts with macromolecular structure in activation of TGF-beta. Nature, 542, 2017

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