PDB: 37932 件ウェブページステータス検索Chemie searchBIRD

---

4XHM	Archaeoglobus fulgidus thioredoxin 3 M60H 分子名称: Thioredoxin (Trx-3) 著者 Dey, M, Bjork, R.E, Drennan, C.L. 登録日 2015-01-05 公開日 2015-04-29 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Rheostat Re-Wired: Alternative Hypotheses for the Control of Thioredoxin Reduction Potentials. Plos One, 10
8UW1	Cryo-EM structure of DNMT3A1 UDR in complex with H2AK119Ub-nucleosome 分子名称: DNA (146-MER), DNA (cytosine-5)-methyltransferase 3A, Histone H2A, ... 著者 Gretarsson, K, Abini-Agbomson, S, Armache, K.-J, Lu, C. 登録日 2023-11-05 公開日 2024-09-11 実験手法 ELECTRON MICROSCOPY (2.88 Å) 主引用文献 Cancer-associated DNA hypermethylation of Polycomb targets requires DNMT3A dual recognition of histone H2AK119 ubiquitination and the nucleosome acidic patch. Sci Adv, 10, 2024
6NQB	Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit 分子名称: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN bS16, 30S ribosomal protein S10, ... 著者 Ortega, J. 登録日 2019-01-20 公開日 2019-06-26 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Role of Era in assembly and homeostasis of the ribosomal small subunit. Nucleic Acids Res., 47, 2019
8WG5	Cryo-EM structure of USP16 bound to H2AK119Ub nucleosome 分子名称: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ... 著者 Ai, H.S, He, Z.Z, Deng, Z.H, Liu, L. 登録日 2023-09-20 公開日 2023-12-27 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.05 Å) 主引用文献 Structural and mechanistic basis for nucleosomal H2AK119 deubiquitination by single-subunit deubiquitinase USP16. Nat.Struct.Mol.Biol., 2024
8Y7E	Cryo-EM Structure of the human minor pre-B complex (pre-precatalytic spliceosome) U12 snRNP part 分子名称: PHD finger-like domain-containing protein 5A, Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein F, ... 著者 Bai, R, Yuan, M, Zhang, P, Luo, T, Shi, Y, Wan, R. 登録日 2024-02-04 公開日 2024-03-13 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (4.66 Å) 主引用文献 Structural basis of U12-type intron engagement by the fully assembled human minor spliceosome. Science, 383, 2024
8Y6O	Cryo-EM Structure of the human minor pre-B complex (pre-precatalytic spliceosome) U11 and tri-snRNP part 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, Centrosomal AT-AC splicing factor, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Bai, R, Yuan, M, Zhang, P, Luo, T, Shi, Y, Wan, R. 登録日 2024-02-02 公開日 2024-03-20 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.38 Å) 主引用文献 Structural basis of U12-type intron engagement by the fully assembled human minor spliceosome. Science, 383, 2024
4F4A	Crystal structure of Nucleoside diphosphate kinase B from Trypanosoma brucei, UDP-bound form 分子名称: MAGNESIUM ION, Nucleoside diphosphate kinase, URIDINE-5'-DIPHOSPHATE 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2012-05-10 公開日 2012-05-30 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure of Nucleoside diphosphate kinase B from Trypanosoma brucei, UDP-bound form To be Published
4FKX	Crystal structure of nucleoside diphosphate kinase B from Trypanosoma brucei bound to CDP 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2012-06-13 公開日 2012-06-27 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal structure of nucleoside diphosphate kinase B from Trypanosoma brucei bound to CDP To be Published
8XBW	The cryo-EM structure of the RAD51 N-terminal lobe domain bound to the histone H4 tail of the nucleosome 分子名称: DNA (5'-D(P*AP*CP*CP*GP*CP*TP*TP*AP*AP*AP*CP*GP*CP*AP*CP*GP*TP*A)-3'), DNA (5'-D(P*TP*AP*CP*GP*TP*GP*CP*GP*TP*TP*TP*AP*AP*GP*CP*GP*GP*T)-3'), DNA repair protein RAD51 homolog 1, ... 著者 Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H. 登録日 2023-12-07 公開日 2024-03-27 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (2.89 Å) 主引用文献 Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site. Nature, 628, 2024
8W9F	Cryo-EM structure of the Rpd3S-nucleosome complex from budding yeast in State 3 分子名称: 3-DNA, 5-DNA, Chromatin modification-related protein EAF3, ... 著者 Wang, C, Zhan, X. 登録日 2023-09-05 公開日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Structures and dynamics of Rpd3S complex bound to nucleosome. Sci Adv, 10, 2024
8W9E	Cryo-EM structure of the Rpd3S-nucleosome complex from budding yeast in State 2 分子名称: 3-DNA, 5-DNA, Chromatin modification-related protein EAF3, ... 著者 Wang, C, Zhan, X. 登録日 2023-09-05 公開日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structures and dynamics of Rpd3S complex bound to nucleosome. Sci Adv, 10, 2024
9GD1	Structure of Chd1 bound to a hexasome-nucleosome complex with a dyad-to-dyad distance of 103 bp. 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chromo domain-containing protein 1, ... 著者 Engeholm, M, Roske, J.J, Oberbeckmann, E, Dienemann, C, Lidschreiber, M, Cramer, P, Farnung, L. 登録日 2024-08-04 公開日 2024-09-18 最終更新日 2024-10-02 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Resolution of transcription-induced hexasome-nucleosome complexes by Chd1 and FACT. Mol.Cell, 84, 2024
8XJV	Structural basis for the linker histone H5-nucleosome binding and chromatin compaction 分子名称: DNA, Histone H2A, Histone H2B 1.1, ... 著者 Li, W.Y, Song, F, Zhu, P. 登録日 2023-12-22 公開日 2024-09-11 最終更新日 2024-10-09 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural basis for linker histone H5-nucleosome binding and chromatin fiber compaction. Cell Res., 34, 2024
9GD2	Structure of Chd1 bound to a dinucleosome with a dyad-to-dyad distance of 103 bp. 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chromo domain-containing protein 1, ... 著者 Engeholm, M, Roske, J.J, Oberbeckmann, E, Dienemann, C, Lidschreiber, M, Cramer, P, Farnung, L. 登録日 2024-08-04 公開日 2024-09-18 最終更新日 2024-10-02 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Resolution of transcription-induced hexasome-nucleosome complexes by Chd1 and FACT. Mol.Cell, 84, 2024
8W9D	Cryo-EM structure of the Rpd3S-nucleosome complex from budding yeast in State 1 分子名称: 3-DNA, 5-DNA, Chromatin modification-related protein EAF3, ... 著者 Wang, C, Zhan, X. 登録日 2023-09-05 公開日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structures and dynamics of Rpd3S complex bound to nucleosome. Sci Adv, 10, 2024
8XBT	The cryo-EM structure of the octameric RAD51 ring bound to the nucleosome with the linker DNA binding 分子名称: DNA (153-MER), DNA (156-MER), DNA repair protein RAD51 homolog 1, ... 著者 Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H. 登録日 2023-12-07 公開日 2024-03-27 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (4.12 Å) 主引用文献 Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site. Nature, 628, 2024
9GD0	Structure of a hexasome-nucleosome complex with a dyad-to-dyad distance of 103 bp. 分子名称: DNA (250-MER), Histone H2A type 1, Histone H2B 1.1, ... 著者 Engeholm, M, Roske, J.J, Oberbeckmann, E, Dienemann, C, Lidschreiber, M, Cramer, P, Farnung, L. 登録日 2024-08-04 公開日 2024-09-18 最終更新日 2024-10-02 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Resolution of transcription-induced hexasome-nucleosome complexes by Chd1 and FACT. Mol.Cell, 84, 2024
8YBK	Cryo-EM structure of the human nucleosome containing the H3.1 E97K mutant 分子名称: DNA (145-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ... 著者 Kimura, T, Hirai, S, Kujirai, T, Ogasawara, M, Takizawa, Y, Kurumizaka, H. 登録日 2024-02-14 公開日 2024-07-24 最終更新日 2024-09-11 実験手法 ELECTRON MICROSCOPY (2.69 Å) 主引用文献 Cryo-EM structure and biochemical analyses of the nucleosome containing the cancer-associated histone H3 mutation E97K. Genes Cells, 29, 2024
8XBU	The cryo-EM structure of the decameric RAD51 ring bound to the nucleosome with the linker DNA binding 分子名称: DNA (153-MER), DNA (156-MER), DNA repair protein RAD51 homolog 1, ... 著者 Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H. 登録日 2023-12-07 公開日 2024-03-27 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (4.24 Å) 主引用文献 Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site. Nature, 628, 2024
8YBJ	Cryo-EM structure of human nucleosome core particle composed of the Widom 601 DNA sequence 分子名称: DNA (145-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ... 著者 Kimura, T, Hirai, S, Kujirai, T, Ogasawara, M, Takizawa, Y, Kurumizaka, H. 登録日 2024-02-14 公開日 2024-07-24 最終更新日 2024-09-11 実験手法 ELECTRON MICROSCOPY (2.38 Å) 主引用文献 Cryo-EM structure and biochemical analyses of the nucleosome containing the cancer-associated histone H3 mutation E97K. Genes Cells, 29, 2024
1WKK	Crystal Structure of Nucleoside Diphosphate Kinase from Thermus thermophilus HB8 in Complex with GDP 分子名称: GUANOSINE-5'-DIPHOSPHATE, nucleoside diphosphate kinase 著者 Takeishi, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2004-06-01 公開日 2005-08-23 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal Structure of Nucleoside Diphosphate Kinase from Thermus thermophilus HB8 To be Published
8XBV	The cryo-EM structure of the RAD51 L1 and L2 loops bound to the linker DNA with the sticky end of the nucleosome 分子名称: DNA (5'-D(P*CP*GP*AP*AP*AP*AP*CP*GP*GP*CP*CP*AP*CP*CP*A)-3'), DNA (5'-D(P*TP*GP*GP*CP*CP*GP*TP*TP*TP*TP*CP*G)-3'), DNA repair protein RAD51 homolog 1 著者 Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H. 登録日 2023-12-07 公開日 2024-03-27 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (7.61 Å) 主引用文献 Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site. Nature, 628, 2024
8XBX	The cryo-EM structure of the RAD51 L2 loop bound to the linker DNA with the blunt end of the nucleosome 分子名称: DNA (5'-D(P*AP*AP*CP*GP*AP*AP*AP*AP*CP*GP*GP*CP*CP*AP*CP*CP*AP*CP*G)-3'), DNA (5'-D(P*CP*GP*TP*GP*GP*TP*GP*GP*CP*CP*GP*TP*TP*TP*TP*CP*GP*TP*T)-3'), DNA repair protein RAD51 homolog 1 著者 Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H. 登録日 2023-12-07 公開日 2024-03-27 最終更新日 2024-04-17 実験手法 ELECTRON MICROSCOPY (4.36 Å) 主引用文献 Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site. Nature, 628, 2024
9B3P	The cryo-EM structure of the H2A.Z-H3.3 double-variant nucleosome 分子名称: DNA (128-MER), Histone H2A.Z, Histone H2B 1.1, ... 著者 Tan, D, Sokolova, V. 登録日 2024-03-19 公開日 2024-06-12 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural and Biochemical Characterization of the Nucleosome Containing Variants H3.3 and H2A.Z. Epigenomes, 8, 2024
9GD3	Structure of a mononucleosome bound by one copy of Chd1 with the DBD on the exit-side DNA. 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chromo domain-containing protein 1, ... 著者 Engeholm, M, Roske, J.J, Oberbeckmann, E, Dienemann, C, Lidschreiber, M, Cramer, P, Farnung, L. 登録日 2024-08-04 公開日 2024-09-18 最終更新日 2024-10-02 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Resolution of transcription-induced hexasome-nucleosome complexes by Chd1 and FACT. Mol.Cell, 84, 2024

<37383940414243444546474849505152>