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5LJ5
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Overall structure of the yeast spliceosome immediately after branching.
分子名称: CWC15, CWC22, Exon 1 (5' exon) of UBC4 pre-mRNA, ...
著者Galej, W.P, Wilkinson, M.F, Fica, S.M, Oubridge, C, Newman, A.J, Nagai, K.
登録日2016-07-17
公開日2016-08-31
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-EM structure of the spliceosome immediately after branching.
Nature, 537, 2016
5LQW
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yeast activated spliceosome
分子名称: Pre-mRNA leakage protein 1, Pre-mRNA-processing protein 45, Pre-mRNA-splicing factor 8, ...
著者Rauhut, R, Luehrmann, R.
登録日2016-08-17
公開日2016-10-05
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (5.8 Å)
主引用文献Molecular architecture of the Saccharomyces cerevisiae activated spliceosome
Science, 6306, 2016
7DU2
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RNA polymerase III EC complex in post-translocation state
分子名称: DNA (5'-D(P*GP*TP*CP*TP*GP*AP*TP*CP*TP*CP*GP*GP*AP*A)-3'), DNA (5'-D(P*TP*TP*CP*CP*GP*AP*GP*AP*TP*CP*AP*GP*AP*CP*GP*AP*GP*AP*T)-3'), DNA-directed RNA polymerase III subunit RPC1, ...
著者Li, L, Yu, Z, Zhao, D, Ren, Y, Hou, H, Xu, Y.
登録日2021-01-07
公開日2021-03-17
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Structure of human RNA polymerase III elongation complex.
Cell Res., 31, 2021
7DN3
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Structure of Human RNA Polymerase III elongation complex
分子名称: DNA (5'-D(P*TP*CP*GP*TP*CP*TP*GP*AP*TP*CP*TP*CP*GP*GP*AP*A)-3'), DNA (5'-D(P*TP*TP*CP*CP*GP*AP*GP*AP*TP*CP*AP*GP*AP*CP*GP*AP*GP*AP*TP*CP*GP*GP*G)-3'), DNA-directed RNA polymerase III subunit RPC1, ...
著者Li, L, Yu, Z, Zhao, D, Ren, Y, Hou, H, Xu, Y.
登録日2020-12-08
公開日2021-03-17
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of human RNA polymerase III elongation complex.
Cell Res., 31, 2021
5LMP
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BU of 5lmp by Molmil
Structure of bacterial 30S-IF1-IF3-mRNA translation pre-initiation complex (state-1C)
分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V.
登録日2016-08-01
公開日2016-10-05
最終更新日2019-10-02
実験手法ELECTRON MICROSCOPY (5.35 Å)
主引用文献Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
3M4O
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BU of 3m4o by Molmil
RNA polymerase II elongation complex B
分子名称: DNA (28-MER), DNA (5'-D(P*GP*TP*GP*GP*TP*TP*AP*TP*GP*GP*GP*TP*AP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, ...
著者Wang, D, Zhu, G, Huang, X, Lippard, S.J.
登録日2010-03-11
公開日2010-05-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.57 Å)
主引用文献X-ray structure and mechanism of RNA polymerase II stalled at an antineoplastic monofunctional platinum-DNA adduct.
Proc.Natl.Acad.Sci.USA, 107, 2010
5LUF
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BU of 5luf by Molmil
Cryo-EM of bovine respirasome
分子名称: COPPER (II) ION, Cytochrome b, Cytochrome b-c1 complex subunit 1, ...
著者Sousa, J.S, Mills, D.J, Vonck, J, Kuehlbrandt, W.
登録日2016-09-08
公開日2016-11-30
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (9.1 Å)
主引用文献Functional asymmetry and electron flow in the bovine respirasome.
Elife, 5, 2016
8P26
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BU of 8p26 by Molmil
Crystal structure of Arabidopsis thaliana PAXX
分子名称: U2 small nuclear ribonucleoprotein auxiliary factor-like protein
著者Ochi, T.
登録日2023-05-15
公開日2023-06-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Plant PAXX has an XLF-like function and stimulates DNA end joining by the Ku-DNA ligase IV/XRCC4 complex.
Plant J., 116, 2023
3V7D
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BU of 3v7d by Molmil
Crystal Structure of ScSkp1-ScCdc4-pSic1 peptide complex
分子名称: Cell division control protein 4, Protein SIC1, Suppressor of kinetochore protein 1
著者Tang, X, Orlicky, S, Mittag, T, Csizmok, V, Pawson, T, Forman-Kay, J, Sicheri, F, Tyers, M.
登録日2011-12-20
公開日2012-05-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.306 Å)
主引用文献Composite low affinity interactions dictate recognition of the cyclin-dependent kinase inhibitor Sic1 by the SCFCdc4 ubiquitin ligase.
Proc.Natl.Acad.Sci.USA, 109, 2012
1TXE
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BU of 1txe by Molmil
Solution structure of the active-centre mutant Ile14Ala of the histidine-containing phosphocarrier protein (HPr) from Staphylococcus carnosus
分子名称: Phosphocarrier protein HPr
著者Moeglich, A, Koch, B, Hengstenberg, W, Brunner, E, Kalbitzer, H.R, Structural Proteomics in Europe (SPINE)
登録日2004-07-04
公開日2005-03-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the active-centre mutant I14A of the histidine-containing phosphocarrier protein from Staphylococcus carnosus
Eur.J.Biochem., 271, 2004
3M3Y
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RNA polymerase II elongation complex C
分子名称: DNA (28-MER), DNA (5'-D(*GP*TP*GP*GP*TP*TP*AP*TP*GP*GP*GP*TP*AP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, ...
著者Wang, D, Zhu, G, Huang, X, Lippard, S.J.
登録日2010-03-10
公開日2010-05-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献X-ray structure and mechanism of RNA polymerase II stalled at an antineoplastic monofunctional platinum-DNA adduct.
Proc.Natl.Acad.Sci.USA, 107, 2010
8P4F
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BU of 8p4f by Molmil
Structural insights into human co-transcriptional capping - structure 6
分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1, DNA (38-MER), ...
著者Garg, G, Dienemann, C, Farnung, L, Schwarz, J, Linden, A, Urlaub, H, Cramer, P.
登録日2023-05-20
公開日2023-07-19
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural insights into human co-transcriptional capping.
Mol.Cell, 83, 2023
7JQ7
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BU of 7jq7 by Molmil
The Phi-28 gp11 DNA packaging Motor
分子名称: Encapsidation protein, IODIDE ION, SULFATE ION
著者Morais, M.C, White, M.A, Dill, E.
登録日2020-08-10
公開日2021-06-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.895 Å)
主引用文献Atomistic basis of force generation, translocation, and coordination in a viral genome packaging motor.
Nucleic Acids Res., 49, 2021
7K04
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BU of 7k04 by Molmil
Structure of TFIIH/Rad4-Rad23-Rad33/DNA in DNA opening
分子名称: CALCIUM ION, DNA repair helicase RAD25, DNA repair helicase RAD3, ...
著者van Eeuwen, T, Min, J.H, Murakami, K.
登録日2020-09-03
公開日2021-07-28
実験手法ELECTRON MICROSCOPY (9.25 Å)
主引用文献Cryo-EM structure of TFIIH/Rad4-Rad23-Rad33 in damaged DNA opening in nucleotide excision repair.
Nat Commun, 12, 2021
1FNT
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BU of 1fnt by Molmil
CRYSTAL STRUCTURE OF THE 20S PROTEASOME FROM YEAST IN COMPLEX WITH THE PROTEASOME ACTIVATOR PA26 FROM TRYPANOSOME BRUCEI AT 3.2 ANGSTROMS RESOLUTION
分子名称: MAGNESIUM ION, PROTEASOME ACTIVATOR PROTEIN PA26, PROTEASOME COMPONENT C1, ...
著者Whitby, F.G, Masters, E, Kramer, L, Knowlton, J.R, Yao, Y, Wang, C.C, Hill, C.P.
登録日2000-08-23
公開日2001-04-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for the activation of 20S proteasomes by 11S regulators.
Nature, 408, 2000
7KBF
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H1.8 bound nucleosome isolated from metaphase chromosome in Xenopus egg extract (oligo fraction)
分子名称: DNA (184-MER), Histone H2A, Histone H2B 1.1, ...
著者Arimura, Y, Funabiki, H.
登録日2020-10-02
公開日2021-09-15
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (4.42 Å)
主引用文献Structural features of nucleosomes in interphase and metaphase chromosomes.
Mol.Cell, 81, 2021
5TGM
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BU of 5tgm by Molmil
Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 3'-amino-3'-deoxyadenosine 5'-(dihydrogen phosphate), ...
著者Melnikov, S, Mailliot, J, Yusupov, M.
登録日2016-09-28
公開日2017-01-18
最終更新日2022-12-07
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Molecular insights into protein synthesis with proline residues.
EMBO Rep., 17, 2016
1FJG
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BU of 1fjg by Molmil
STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN
分子名称: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
著者Carter, A.P, Clemons Jr, W.M, Brodersen, D.E, Wimberly, B.T, Morgan-Warren, R.J, Ramakrishnan, V.
登録日2000-08-08
公開日2000-09-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics
Nature, 407, 2000
2ZJP
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BU of 2zjp by Molmil
Thiopeptide antibiotic Nosiheptide bound to the large ribosomal subunit of Deinococcus radiodurans
分子名称: 4-(hydroxymethyl)-3-methyl-1H-indole-2-carboxylic acid, 50S RIBOSOMAL PROTEIN L11, 50S RIBOSOMAL PROTEIN L13, ...
著者Harms, J.M, Wilson, D.N, Schluenzen, F, Connell, S.R, Stachelhaus, T, Zaborowska, Z, Spahn, C.M.T, Fucini, P.
登録日2008-03-07
公開日2008-06-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Translational Regulation Via L11: Molecular Switches on the Ribosome Turned on and Off by Thiostrepton and Micrococcin.
Mol.Cell, 30, 2008
4BBS
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BU of 4bbs by Molmil
Structure of an initially transcribing RNA polymerase II-TFIIB complex
分子名称: 5'-D(*AP*GP*CP*GP*CP*AP*GP*TP*TP*GP*TP*GP*CP*TP *AP*TP*GP*AP*TP*AP*TP*TP*TP*TP*TP*AP*TP)-3', 5'-D(*GP*GP*CP*AP*CP*AP*AP*CP*TP*GP*CP*GP*CP*TP)-3', 5'-R(*AP*UP*AP*UP*CP*AP)-3', ...
著者Sainsbury, S, Niesser, J, Cramer, P.
登録日2012-09-27
公開日2012-11-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structure and Function of the Initially Transcribing RNA Polymerase II-TFIIB Complex
Nature, 493, 2013
4DV5
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Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A914G, bound with streptomycin
分子名称: 16S rRNA, MAGNESIUM ION, STREPTOMYCIN, ...
著者Demirci, H, Murphy IV, F, Murphy, E, Gregory, S.T, Dahlberg, A.E, Jogl, G.
登録日2012-02-22
公開日2013-02-27
実験手法X-RAY DIFFRACTION (3.683 Å)
主引用文献A structural basis for streptomycin resistance
To be Published
1G5G
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BU of 1g5g by Molmil
FRAGMENT OF FUSION PROTEIN FROM NEWCASTLE DISEASE VIRUS
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0, ...
著者Lawrence, M.C, Smith, B.J.
登録日2000-11-01
公開日2002-02-27
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献The structure of the fusion glycoprotein of Newcastle disease virus suggests a novel paradigm for the molecular mechanism of membrane fusion.
Structure, 9, 2001
4UW4
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Human galectin-7 in complex with a galactose based dendron D2-1.
分子名称: DENDRON D2-1, GALECTIN-7
著者Ramaswamy, S, Sleiman, M.H, Masuyer, G, Arbez-Gindre, C, Micha-Screttas, M, Calogeropoulou, T, Steele, B.R, Acharya, K.R.
登録日2014-08-08
公開日2014-11-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.766 Å)
主引用文献Structural Basis of Multivalent Galactose-Based Dendrimer Recognition by Human Galectin-7.
FEBS J., 282, 2015
4V4C
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BU of 4v4c by Molmil
Crystal Structure of Pyrogallol-Phloroglucinol Transhydroxylase from Pelobacter acidigallici
分子名称: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, ACETATE ION, CALCIUM ION, ...
著者Messerschmidt, A, Niessen, H, Abt, D, Einsle, O, Schink, B, Kroneck, P.M.H.
登録日2004-06-02
公開日2014-07-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of pyrogallol-phloroglucinol transhydroxylase, an Mo enzyme capable of intermolecular hydroxyl transfer between phenols
PROC.NATL.ACAD.SCI.USA, 101, 2004
6PMJ
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Sigm28-transcription initiation complex with specific promoter at the state 2
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Liu, B, Shi, W.
登録日2019-07-02
公開日2020-05-13
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.91 Å)
主引用文献Structural basis of bacterial sigma28-mediated transcription reveals roles of the RNA polymerase zinc-binding domain.
Embo J., 39, 2020

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件を2024-08-07に公開中

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