PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

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3NFF	Crystal structure of extended Dimerization module of RNA polymerase I subcomplex A49/A34.5 分子名称: RNA polymerase I subunit A34.5, RNA polymerase I subunit A49 著者 Geiger, S.R, Lorenzen, K, Schreieck, A, Hanecker, P, Kostrewa, D, Heck, A.J.R, Cramer, P. 登録日 2010-06-10 公開日 2010-09-08 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (3.24 Å) 主引用文献 RNA Polymerase I Contains a TFIIF-Related DNA-Binding Subcomplex. Mol.Cell, 39, 2010
6KML	2.09 Angstrom resolution crystal structure of tetrameric HigBA toxin-antitoxin complex from E.coli 分子名称: Antitoxin HigA, mRNA interferase toxin HigB 著者 Jadhav, P, Sinha, V.K, Rothweiler, U, Singh, M. 登録日 2019-07-31 公開日 2020-11-18 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.095 Å) 主引用文献 2.09 angstrom Resolution structure of E. coli HigBA toxin-antitoxin complex reveals an ordered DNA-binding domain and intrinsic dynamics in antitoxin. Biochem.J., 477, 2020
6KMQ	2.3 Angstrom resolution structure of dimeric HigBA toxin-antitoxin complex from E. coli 分子名称: Antitoxin HigA, mRNA interferase toxin HigB 著者 Jadhav, P, Sinha, V.K, Rothweiler, U, Singh, M. 登録日 2019-07-31 公開日 2020-11-18 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 2.09 angstrom Resolution structure of E. coli HigBA toxin-antitoxin complex reveals an ordered DNA-binding domain and intrinsic dynamics in antitoxin. Biochem.J., 477, 2020
4ZPK	Crystal Structure of the Heterodimeric HIF-2a:ARNT Complex with HRE DNA 分子名称: Aryl hydrocarbon receptor nuclear translocator, DNA (5'-D(*CP*AP*CP*GP*AP*CP*CP*CP*GP*CP*AP*CP*GP*TP*AP*CP*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*GP*CP*TP*GP*CP*GP*TP*AP*CP*GP*TP*GP*CP*GP*GP*GP*TP*CP*GP*T)-3'), ... 著者 Wu, D, Potluri, N, Lu, J, Kim, Y, Rastinejad, F. 登録日 2015-05-08 公開日 2015-08-12 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Structural integration in hypoxia-inducible factors. Nature, 524, 2015
4ZPR	Crystal Structure of the Heterodimeric HIF-1a:ARNT Complex with HRE DNA 分子名称: Aryl hydrocarbon receptor nuclear translocator, DNA (5'-D(*CP*AP*CP*GP*AP*CP*CP*CP*GP*CP*AP*CP*GP*TP*AP*CP*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*GP*CP*TP*GP*CP*GP*TP*AP*CP*GP*TP*GP*CP*GP*GP*GP*TP*CP*GP*T)-3'), ... 著者 Wu, D, Potluri, N, Lu, J, Kim, Y, Rastinejad, F. 登録日 2015-05-08 公開日 2015-08-12 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.902 Å) 主引用文献 Structural integration in hypoxia-inducible factors. Nature, 524, 2015
6M5S	The coordinates of the apo hexameric terminase complex 分子名称: Tripartite terminase subunit 1, Tripartite terminase subunit 2, Tripartite terminase subunit 3, ... 著者 Yang, Y.X, Yang, P, Wang, N, Chen, Z.H, Zhou, Z.H, Rao, Z.H, Wang, X.X. 登録日 2020-03-11 公開日 2020-10-28 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Architecture of the herpesvirus genome-packaging complex and implications for DNA translocation. Protein Cell, 11, 2020
6M5U	The coordinates of the monomeric terminase complex in the presence of the ADP-BeF3 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ... 著者 Yang, Y.X, Yang, P, Wang, N, Zhu, L, Zhou, Z.H, Rao, Z.H, Wang, X.X. 登録日 2020-03-11 公開日 2020-10-28 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Architecture of the herpesvirus genome-packaging complex and implications for DNA translocation. Protein Cell, 11, 2020
6O47	human cGAS core domain (K427E/K428E) bound with RU-521 分子名称: (3~{S})-3-[1-[4,5-bis(chloranyl)-1~{H}-benzimidazol-2-yl]-3-methyl-5-oxidanyl-pyrazol-4-yl]-3~{H}-2-benzofuran-1-one, 2-(4,5-dichloro-1H-benzimidazol-2-yl)-5-methyl-4-[(1R)-3-oxo-1,3-dihydro-2-benzofuran-1-yl]-1,2-dihydro-3H-pyrazol-3-one, CITRIC ACID, ... 著者 Xie, W, Lama, L, Adura, C, Glickman, J.F, Tuschl, T, Patel, D.J. 登録日 2019-02-28 公開日 2019-05-29 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.196 Å) 主引用文献 Human cGAS catalytic domain has an additional DNA-binding interface that enhances enzymatic activity and liquid-phase condensation. Proc.Natl.Acad.Sci.USA, 116, 2019
6M5R	The coordinates of the apo monomeric terminase complex 分子名称: Tripartite terminase subunit 1, Tripartite terminase subunit 2, Tripartite terminase subunit 3, ... 著者 Yang, Y.X, Yang, P, Wang, N, Chen, Z.H, Zhou, Z.H, Rao, Z.H, Wang, X.X. 登録日 2020-03-11 公開日 2020-10-28 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Architecture of the herpesvirus genome-packaging complex and implications for DNA translocation. Protein Cell, 11, 2020
6M5V	The coordinate of the hexameric terminase complex in the presence of the ADP-BeF3 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ... 著者 Yang, Y.X, Yang, P, Wang, N, Chen, Z.H, Zhou, Z.H, Rao, Z.H, Wang, X.X. 登録日 2020-03-11 公開日 2020-10-28 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Architecture of the herpesvirus genome-packaging complex and implications for DNA translocation. Protein Cell, 11, 2020
4XR1	Escherichia Coli Replication Terminator Protein (Tus) Complexed With DNA- AG/AT mismatch. 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*GP*TP*AP*AP*TP*GP*TP*TP*GP*TP*AP*AP*CP*TP*A)-3'), DNA (5'-D(*TP*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*G)-3'), ... 著者 Oakley, A.J. 登録日 2015-01-20 公開日 2015-08-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Replisome speed determines the efficiency of the Tus-Ter replication termination barrier. Nature, 525, 2015
1IDY	STRUCTURE OF MYB TRANSFORMING PROTEIN, NMR, MINIMIZED AVERAGE STRUCTURE 分子名称: MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3 著者 Furukawa, K, Oda, M, Nakamura, H. 登録日 1996-08-15 公開日 1996-12-23 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 A small engineered protein lacks structural uniqueness by increasing the side-chain conformational entropy. Proc.Natl.Acad.Sci.USA, 93, 1996
4XR2	Escherichia Coli Replication Terminator Protein (Tus) H114A mutant Complexed With DNA- TerA lock. 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, DNA (5'-D(*TP*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*C)-3'), ... 著者 Oakley, A.J. 登録日 2015-01-20 公開日 2015-08-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Replisome speed determines the efficiency of the Tus-Ter replication termination barrier. Nature, 525, 2015
4XR3	Escherichia Coli Replication Terminator Protein (Tus) Complexed With DNA- GC(6) swapped. 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*TP*AP*CP*TP*AP*TP*GP*TP*TP*GP*TP*AP*AP*CP*TP*A)-3'), DNA (5'-D(*TP*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*GP*T)-3'), ... 著者 Oakley, A.J. 登録日 2015-01-20 公開日 2015-08-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Replisome speed determines the efficiency of the Tus-Ter replication termination barrier. Nature, 525, 2015
7T5V	Structure of E. coli CapH C-terminal domain I99M mutant 分子名称: Helix-turn-helix domain-containing protein 著者 Lau, R.K, Corbett, K.D. 登録日 2021-12-13 公開日 2022-09-14 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.26 Å) 主引用文献 A conserved signaling pathway activates bacterial CBASS immune signaling in response to DNA damage. Embo J., 41, 2022
7T5W	Structure of E. coli CapH C-terminal domain 分子名称: Helix-turn-helix domain-containing protein 著者 Lau, R.K, Corbett, K.D. 登録日 2021-12-13 公開日 2022-09-14 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 A conserved signaling pathway activates bacterial CBASS immune signaling in response to DNA damage. Embo J., 41, 2022
6PQX	Cryo-EM structure of HzTransib/nicked TIR substrate DNA hairpin forming complex (HFC) 分子名称: CALCIUM ION, DNA (5'-D(P*CP*AP*CP*GP*GP*TP*GP*GP*AP*TP*CP*GP*AP*AP*AP*A)-3'), DNA (5'-D(P*TP*CP*TP*GP*GP*CP*CP*TP*AP*GP*AP*TP*CP*T)-3'), ... 著者 Liu, C, Yang, Y, Schatz, D.G. 登録日 2019-07-10 公開日 2019-10-09 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Structures of a RAG-like transposase during cut-and-paste transposition. Nature, 575, 2019
4L85	Crystal structure of receiver domain of KdpE D52A mutant from E. coli 分子名称: IODIDE ION, KDP operon transcriptional regulatory protein KdpE 著者 Kumar, S, Yernool, D.A. 登録日 2013-06-15 公開日 2014-02-19 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.202 Å) 主引用文献 An asymmetric heterodomain interface stabilizes a response regulator-DNA complex. Nat Commun, 5, 2014
7TMY	Structure of Mouse Importin alpha NEIL3 NLS Peptide Complex 分子名称: Importin subunit alpha-1, Nuclear Localization Signal from Endonuclease 8-like 3 著者 Moraes, I.R, de Oliveira, H.C, Fontes, M.R.M. 登録日 2022-01-20 公開日 2023-08-02 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Structural basis of nuclear transport for NEIL DNA glycosylases mediated by importin-alpha. Biochim Biophys Acta Proteins Proteom, 1872, 2023
6NE0	Structure of double-stranded target DNA engaged Csy complex from Pseudomonas aeruginosa (PA-14) 分子名称: CRISPR RNA (60-MER), CRISPR target DNA (44-MER), CRISPR-associated endonuclease Cas6/Csy4, ... 著者 Chowdhury, S, Rollins, M.F, Carter, J, Golden, S.M, Miettinen, H.M, Santiago-Frangos, A, Faith, D, Lawrence, M.C, Wiedenheft, B, Lander, G.C. 登録日 2018-12-15 公開日 2018-12-26 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure Reveals a Mechanism of CRISPR-RNA-Guided Nuclease Recruitment and Anti-CRISPR Viral Mimicry. Mol. Cell, 74, 2019
7MR1	Cryo-EM structure of RecBCD with undocked RecBNuc and flexible RecD C-terminus 分子名称: RecBCD enzyme subunit RecB, RecBCD enzyme subunit RecC, RecBCD enzyme subunit RecD 著者 Hao, L, Zhang, R, Lohman, T.M. 登録日 2021-05-07 公開日 2021-07-28 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Heterogeneity in E. coli RecBCD Helicase-DNA Binding and Base Pair Melting. J.Mol.Biol., 433, 2021
7MR0	Cryo-EM structure of RecBCD with docked RecBNuc and flexible RecD 分子名称: RecBCD enzyme subunit RecB, RecBCD enzyme subunit RecC, RecBCD enzyme subunit RecD 著者 Hao, L, Zhang, R, Lohman, T.M. 登録日 2021-05-07 公開日 2021-07-28 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Heterogeneity in E. coli RecBCD Helicase-DNA Binding and Base Pair Melting. J.Mol.Biol., 433, 2021
7MR2	Cryo-EM structure of RecBCD with undocked RecBNuc and flexible RecD 分子名称: RecBCD enzyme subunit RecB, RecBCD enzyme subunit RecC, RecBCD enzyme subunit RecD 著者 Hao, L, Zhang, R, Lohman, T.M. 登録日 2021-05-07 公開日 2021-07-28 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Heterogeneity in E. coli RecBCD Helicase-DNA Binding and Base Pair Melting. J.Mol.Biol., 433, 2021
1CI6	TRANSCRIPTION FACTOR ATF4-C/EBP BETA BZIP HETERODIMER 分子名称: BETA-MERCAPTOETHANOL, FE (III) ION, TRANSCRIPTION FACTOR ATF-4, ... 著者 Podust, L.M, Kim, Y. 登録日 1999-04-07 公開日 2000-12-04 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal structure of the CCAAT box/enhancer-binding protein beta activating transcription factor-4 basic leucine zipper heterodimer in the absence of DNA J.Biol.Chem., 276, 2001
1IDZ	STRUCTURE OF MYB TRANSFORMING PROTEIN, NMR, 20 STRUCTURES 分子名称: MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3 著者 Furukawa, K, Oda, M, Nakamura, H. 登録日 1996-08-15 公開日 1996-12-23 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 A small engineered protein lacks structural uniqueness by increasing the side-chain conformational entropy. Proc.Natl.Acad.Sci.USA, 93, 1996

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