PDB: 45612 件ウェブページステータス検索Chemie searchBIRD

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3MPQ	I204R1 mutant of LeuT 分子名称: CHLORIDE ION, LEUCINE, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate, ... 著者 Kroncke, B.M. 登録日 2010-04-27 公開日 2010-12-01 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structural origins of nitroxide side chain dynamics on membrane protein alpha-helical sites. Biochemistry, 49, 2010
8OY0	ATP phosphoribosyltransferase (HisZG ATPPRT) from Acinetobacter baumanii 分子名称: ATP phosphoribosyltransferase, ATP phosphoribosyltransferase regulatory subunit, GLYCEROL, ... 著者 Alphey, M.S, Read, B, da Silva, R.G. 登録日 2023-05-03 公開日 2023-11-29 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal Structure, Steady-State, and Pre-Steady-State Kinetics of Acinetobacter baumannii ATP Phosphoribosyltransferase. Biochemistry, 63, 2024
7RC3	Aeronamide N-methyltransferase, AerE (Y137F) 分子名称: ASPARTIC ACID, CALCIUM ION, HEXAETHYLENE GLYCOL, ... 著者 Cogan, D.P, Reyes, R, Nair, S.K. 登録日 2021-07-07 公開日 2022-03-30 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 Structure and mechanism for iterative amide N -methylation in the biosynthesis of channel-forming peptide cytotoxins. Proc.Natl.Acad.Sci.USA, 119, 2022
7RC4	Aeronamide N-methyltransferase, AerE (D141A) 分子名称: CALCIUM ION, HEXAETHYLENE GLYCOL, Methyltransferase family protein, ... 著者 Cogan, D.P, Reyes, R, Nair, S.K. 登録日 2021-07-07 公開日 2022-03-30 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 Structure and mechanism for iterative amide N -methylation in the biosynthesis of channel-forming peptide cytotoxins. Proc.Natl.Acad.Sci.USA, 119, 2022
7RC2	Aeronamide N-methyltransferase, AerE 分子名称: CALCIUM ION, Methyltransferase family protein, S-ADENOSYL-L-HOMOCYSTEINE, ... 著者 Cogan, D.P, Reyes, R, Nair, S.K. 登録日 2021-07-07 公開日 2022-03-30 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.51 Å) 主引用文献 Structure and mechanism for iterative amide N -methylation in the biosynthesis of channel-forming peptide cytotoxins. Proc.Natl.Acad.Sci.USA, 119, 2022
7RC6	Aeronamide N-methyltransferase, AerE, bound to modified peptide substrate, AerA-DL,34 分子名称: Aeronamide A peptide, Methyltransferase family protein, S-ADENOSYL-L-HOMOCYSTEINE, ... 著者 Cogan, D.P, Reyes, R, Nair, S.K. 登録日 2021-07-07 公開日 2022-03-30 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.71 Å) 主引用文献 Structure and mechanism for iterative amide N -methylation in the biosynthesis of channel-forming peptide cytotoxins. Proc.Natl.Acad.Sci.USA, 119, 2022
3MOR	Crystal structure of Cathepsin B from Trypanosoma Brucei 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Cathepsin B-like cysteine protease, ... 著者 Cupelli, K, Stehle, T. 登録日 2010-04-23 公開日 2011-11-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 In vivo protein crystallization opens new routes in structural biology. Nat.Methods, 9, 2012
8GSG	T3R3 form of Human insulin with single Zn 分子名称: CHLORIDE ION, Insulin A chain, Insulin B chain, ... 著者 Zhu, Z.L. 登録日 2022-09-06 公開日 2023-03-15 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 T3R3 insulin with single Zn To Be Published
8EYA	Crystal structure of PTP1B D181A/Q262A/C215A phosphatase domain with a JAK2 activation loop phosphopeptide 分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ... 著者 Morris, R, Kershaw, N.J, Babon, J.J. 登録日 2022-10-26 公開日 2023-07-05 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.099 Å) 主引用文献 Structure guided studies of the interaction between PTP1B and JAK. Commun Biol, 6, 2023
8EO1	Human PU.1 ETS-Domain (165-270) Bound to d(AATAAGCGGAAGTGGG) with Hemi-methylated CpG (reverse strand) 分子名称: DNA (5'-D(*AP*AP*TP*AP*AP*GP*CP*GP*GP*AP*AP*GP*TP*GP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*CP*AP*CP*TP*TP*CP*GP*CP*TP*TP*AP*T)-3'), SODIUM ION, ... 著者 Terrell, J.R, Poon, G.M.K. 登録日 2022-10-01 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.28 Å) 主引用文献 DNA selection by the master transcription factor PU.1. Cell Rep, 42, 2023
7TL7	1.90A resolution structure of independent phosphoglycerate mutase from C. elegans in complex with a macrocyclic peptide inhibitor (Sa-D2) 分子名称: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, IMIDAZOLE, SODIUM ION, ... 著者 Liu, L, Lovell, S, Battaile, K.P, Dranchak, P, Queme, B, Aitha, M, van Neer, R.H.P, Kimura, H, Katho, T, Suga, H, Inglese, J. 登録日 2022-01-18 公開日 2022-08-10 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Serum-Stable and Selective Backbone-N-Methylated Cyclic Peptides That Inhibit Prokaryotic Glycolytic Mutases. Acs Chem.Biol., 17, 2022
8F28	Lysozyme Structures from Single-Entity Crystallization Method NanoAC 分子名称: ACETATE ION, CHLORIDE ION, Lysozyme C, ... 著者 Yang, R, Sankaran, B, Ogbonna, E, Wang, G. 登録日 2022-11-07 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 A Single-Entity Method for Actively Controlled Nucleation and High-Quality Protein Crystal Synthesis. Anal.Chem., 95, 2023
8EZG	Monobody 12D1 bound to KRAS(G12D) 分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Hattori, T, Glasser, E, Akkapeddi, P, Ketavarapu, G, Teng, K.W, Koide, A, Koide, S. 登録日 2022-10-31 公開日 2023-07-19 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 Exploring switch II pocket conformation of KRAS(G12D) with mutant-selective monobody inhibitors. Proc.Natl.Acad.Sci.USA, 120, 2023
2CC8	Complexes of Dodecin with Flavin and Flavin-like Ligands 分子名称: CHLORIDE ION, MAGNESIUM ION, RIBOFLAVIN, ... 著者 Grininger, M, Zeth, K, Oesterhelt, D. 登録日 2006-01-13 公開日 2006-01-31 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Dodecins: A Family of Lumichrome Binding Proteins. J.Mol.Biol., 357, 2006
7QZQ	Crystal structure of the kelch domain of human KBTBD12 分子名称: 1,2-ETHANEDIOL, Kelch repeat and BTB domain-containing protein 12, SODIUM ION 著者 Manning, C.E, Chen, Z, Chen, X, Bradshaw, W.J, Bakshi, S, Mckinley, G, Chalk, R, Burgess-Brown, N, von Delft, F, Bullock, A.N. 登録日 2022-01-31 公開日 2022-05-04 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Crystal structure of the kelch domain of human KBTBD12 To Be Published
7R4U	Apoform of FtrA/P19 from Rubrivivax gelatinosus 分子名称: FtrA-P19, GLYCEROL, SODIUM ION, ... 著者 Morera, S, Vigouroux, A, Plancqueel, S. 登録日 2022-02-09 公開日 2022-05-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.23 Å) 主引用文献 New insights into the mechanism of iron transport through the bacterial Ftr system present in pathogens. Febs J., 289, 2022
7RMA	Structure of the fourth UIM (Ubiquitin Interacting Motif) of ANKRD13D in complex with a high affinity UbV (Ubiquitin Variant) 分子名称: Ankyrin repeat domain-containing protein 13D, SODIUM ION, SULFATE ION, ... 著者 Singer, A.U, Manczyk, N, Veggiani, G, Sicheri, F, Sidhu, S.S. 登録日 2021-07-27 公開日 2022-05-11 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Panel of Engineered Ubiquitin Variants Targeting the Family of Human Ubiquitin Interacting Motifs. Acs Chem.Biol., 17, 2022
7R3S	FtrA/P19 of Rubrivivax gelatinosus in complex with Ni 分子名称: FtrA-P19 protein, GLYCEROL, NICKEL (II) ION, ... 著者 Morera, S, Vigouroux, A. 登録日 2022-02-07 公開日 2022-05-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.79 Å) 主引用文献 New insights into the mechanism of iron transport through the bacterial Ftr system present in pathogens. Febs J., 289, 2022
8FVW	CryoEM structure of E.coli transcription elongation complex bound to ppGpp 分子名称: DNA (53-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Duan, W, Serganov, A. 登録日 2023-01-19 公開日 2023-04-05 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.1 Å) 主引用文献 Control of transcription elongation and DNA repair by alarmone ppGpp. Nat.Struct.Mol.Biol., 30, 2023
7RGA	Crystal structure of nanoCLAMP3:VHH in complex with MTX 分子名称: METHOTREXATE, SODIUM ION, nano CLostridial Antibody Mimetic Protein 3 VHH 著者 Guo, Z, Alexandrov, K. 登録日 2021-07-14 公開日 2022-05-25 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Design of a methotrexate-controlled chemical dimerization system and its use in bio-electronic devices. Nat Commun, 12, 2021
8OIO	Crystal structure of the kelch domain of human KLHL12 in complex with PLEKHA4 peptide 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Kelch-like protein 12, ... 著者 Dalietou, E.V, Chen, Z, Ramdass, A.E, Manning, C, Richardson, W, Aitmakhanova, K, Platt, M, Pike, A.C.W, Fedorov, O, Brennan, P, Bullock, A.N. 登録日 2023-03-23 公開日 2024-04-03 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.954 Å) 主引用文献 Crystal structure of the kelch domain of human KLHL12 in complex with PLEKHA4 peptide To Be Published
7UGH	Crystal Structure of enolase family protein from Naegleria fowleri with bound 2-phosphoglyceric acid 分子名称: 1,2-ETHANEDIOL, 2-PHOSPHOGLYCERIC ACID, ACETATE ION, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2022-03-24 公開日 2022-04-13 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal Structure of enolase family protein from Naegleria fowleri with bound 2-phosphoglyceric acid to be published
8P58	Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 500 micromolar X77 enantiomer R. 分子名称: 1,2-ETHANEDIOL, 3C-like proteinase nsp5, CHLORIDE ION, ... 著者 Costanzi, E, Demitri, N, Storici, P. 登録日 2023-05-23 公開日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Unexpected Single-Ligand Occupancy and Negative Cooperativity in the SARS-CoV-2 Main Protease. J.Chem.Inf.Model., 64, 2024
8P86	Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 5 mM MG-132, from an "old" crystal. 分子名称: 1,2-ETHANEDIOL, 3C-like proteinase nsp5, CHLORIDE ION, ... 著者 Costanzi, E, Demitri, N, Storici, P. 登録日 2023-05-31 公開日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Unexpected Single-Ligand Occupancy and Negative Cooperativity in the SARS-CoV-2 Main Protease. J.Chem.Inf.Model., 64, 2024
7ULT	Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer Apo-Form. 分子名称: 2'-O-methyltransferase, FORMIC ACID, Non-structural protein 10, ... 著者 Minasov, G, Shuvalova, L, Brunzelle, J.S, Rosas-Lemus, M, Kiryukhina, O, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2022-04-05 公開日 2022-04-13 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer Apo-Form. To Be Published

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