PDB: 225158 件ウェブページステータス検索Chemie searchBIRD

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4XVI	Binary complex of human polymerase nu and DNA with the finger domain ajar 分子名称: DNA (5'-D(*AP*CP*TP*CP*TP*GP*AP*CP*GP*CP*TP*AP*GP*G)-3'), DNA (5'-D(*CP*CP*TP*AP*GP*CP*GP*TP*CP*AP*G)-3'), DNA polymerase nu 著者 Lee, Y.-S, Yang, W. 登録日 2015-01-27 公開日 2015-03-11 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 How a homolog of high-fidelity replicases conducts mutagenic DNA synthesis. Nat.Struct.Mol.Biol., 22, 2015
6PLG	Crystal structure of human PHGDH complexed with Compound 15 分子名称: (2S)-(4-{3-[(4,5-dichloro-1-methyl-1H-indole-2-carbonyl)amino]oxetan-3-yl}phenyl)(pyridin-3-yl)acetic acid, D-3-phosphoglycerate dehydrogenase, D-MALATE 著者 Olland, A, Lakshminarasimhan, D, White, A, Suto, R.K. 登録日 2019-06-30 公開日 2019-07-24 最終更新日 2019-09-04 実験手法 X-RAY DIFFRACTION (2.93 Å) 主引用文献 Inhibition of 3-phosphoglycerate dehydrogenase (PHGDH) by indole amides abrogates de novo serine synthesis in cancer cells. Bioorg.Med.Chem.Lett., 29, 2019
6DZC	Solution structure of Rbfox2 RRM mimetic peptide CPfox6 分子名称: CPfox6 著者 Sun, Y.-T, Varani, G. 登録日 2018-07-03 公開日 2019-05-15 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 A Small Cyclic beta-Hairpin Peptide Mimics the Rbfox2 RNA Recognition Motif and Binds to the Precursor miRNA 20b. Chembiochem, 20, 2019
6P2E	Structure of Aedes aegypti OBP22 in the complex with benzaldehyde 分子名称: BENZOIC ACID, GLYCEROL, OBP22, ... 著者 Jones, D.N, Murphy, E. 登録日 2019-05-21 公開日 2019-07-31 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Aedes aegypti Odorant Binding Protein 22 selectively binds fatty acids through a conformational change in its C-terminal tail. Sci Rep, 10, 2020
6DZE	Solution structure of Rbfox2 RRM mimetic peptide CPfox7 分子名称: CPfox7 著者 Sun, Y.-T, Varani, G. 登録日 2018-07-03 公開日 2019-05-15 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 A Small Cyclic beta-Hairpin Peptide Mimics the Rbfox2 RNA Recognition Motif and Binds to the Precursor miRNA 20b. Chembiochem, 20, 2019
6P2K	Crystal structure of AFV00434, an ancestral GH74 enzyme 分子名称: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ACETATE ION, CHLORIDE ION, ... 著者 Stogios, P.J, Skarina, T, Arnal, G, Brumer, H, Savchenko, A. 登録日 2019-05-21 公開日 2019-07-31 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Substrate specificity, regiospecificity, and processivity in glycoside hydrolase family 74. J.Biol.Chem., 294, 2019
6EE9	Cytokine-like Peptide Stress-response Peptide-1 from Manduca Sexta 分子名称: Stress-response Peptide-1 著者 Schrag, L. 登録日 2018-08-13 公開日 2019-08-21 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 NMR Solution Structure and Expression Profile of Stress Response Peptide-1: A Cytokine from Manduca sexta To be published
3KH8	Crystal structure of MaoC-like dehydratase from Phytophthora Capsici 分子名称: MaoC-like dehydratase 著者 Wang, H, Zhang, K, Guo, J, Zhou, Q, Zheng, X, Sun, F, Pang, H, Zhang, X. 登録日 2009-10-30 公開日 2010-11-10 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of MaoC-like dehydratase from Phytophthora Capsici To be Published
6P6U	Crystal Structure of Monoclinic Rabbit Muscle Lactate Dehydrogenase with Four Tetramers as the Asymmetric Unit 分子名称: ADENOSINE MONOPHOSPHATE, L-lactate dehydrogenase A chain 著者 McPherson, A. 登録日 2019-06-04 公開日 2020-06-17 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.42 Å) 主引用文献 Crystal Structure of Monoclinic Rabbit Muscle Lactate Dehydrogenase with Four Tetramers as the Asymmetric Unit to be published
7S7T	iNicSnFR3a Nicotine Sensor comprising Periplasmic Binding sequence plus Fluorescent Sequence with varenicline bound 分子名称: IODIDE ION, VARENICLINE, iNicSnFR 3.0 Fluorescent Nicotine Sensor 著者 Fan, C, Shivange, A.V, Looger, L.L, Lester, H.A, Rees, D.C. 登録日 2021-09-17 公開日 2021-10-13 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Correction: Fluorescence activation mechanism and imaging of drug permeation with new sensors for smoking-cessation ligands. Elife, 11, 2022
4XGX	Crystal structure of Escherichia coli Flavin trafficking protein, an FMN transferase, Y60N mutant, ADP-inhibited 分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, FAD:protein FMN transferase, ... 著者 Tomchick, D.R, Brautigam, C.A, Deka, R.K, Norgard, M.V. 登録日 2015-01-02 公開日 2015-12-16 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Molecular insights into the enzymatic diversity of flavin-trafficking protein (Ftp; formerly ApbE) in flavoprotein biogenesis in the bacterial periplasm. Microbiologyopen, 5, 2016
3KJD	Human poly(ADP-ribose) polymerase 2, catalytic fragment in complex with an inhibitor ABT-888 分子名称: (2R)-2-(7-carbamoyl-1H-benzimidazol-2-yl)-2-methylpyrrolidinium, GLYCEROL, Poly [ADP-ribose] polymerase 2 著者 Karlberg, T, Schutz, P, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kallas, A, Kotenyova, T, Kotzsch, A, Kraulis, P, Nielsen, T.K, Moche, M, Nordlund, P, Nyman, T, Persson, C, Roos, A.K, Siponen, M.I, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Wisniewska, M, Schuler, H, Structural Genomics Consortium (SGC) 登録日 2009-11-03 公開日 2009-11-17 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal structure of the catalytic domain of human PARP2 in complex with PARP inhibitor ABT-888. Biochemistry, 49, 2010
3KHV	Crystal Structures of Urokinase-type Plasminogen Activator in Complex with 4-(Aminomethyl) Benzoic Acid and 4-(Aminomethyl-phenyl)-methanol 分子名称: SULFATE ION, TRIETHYLENE GLYCOL, Urokinase-type plasminogen activator, ... 著者 Jiang, L.-G, Zhao, G.-X, Bian, X.-B, Yuan, C, Huang, Z.-X, Huang, M.-D. 登録日 2009-10-30 公開日 2009-12-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Crystal Structures of Urokinase-type Plasminogen Activator in Complex with 4-(Aminomethyl) Benzoic Acid and 4-(Aminomethyl-phenyl)-methanol CHIN.J.STRUCT.CHEM., 28, 2009
6P4E	Leishmania mexicana CPB in complex with an aza-nitrile inhibitor 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-tert-butyl-N-[(2S)-1-(2-cyano-1,2-dimethylhydrazinyl)-4-methyl-1-oxopentan-2-yl]-1-methyl-1H-pyrazole-5-carboxamide (non-preferred name), ... 著者 Ribeiro, J.F.R, Li, C, De Vita, D, Emsley, J, Montanari, C.A. 登録日 2019-05-27 公開日 2020-06-03 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 High Resolution X-Ray Crystal Structures of LmCPB2.8 Co-Crystalized with Dipeptidyl Aza-nitrile Inhibitor and Structure Activity Relationships To Be Published
3KIA	Crystal structure of mannosyl-3-phosphoglycerate synthase from Rubrobacter xylanophilus 分子名称: CHLORIDE ION, GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, ... 著者 Macedo-Ribeiro, S, Pereira, P.J.B, Empadinhas, N, da Costa, M.S. 登録日 2009-11-01 公開日 2010-11-03 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Functional and structural characterization of a novel mannosyl-3-phosphoglycerate synthase from Rubrobacter xylanophilus reveals its dual substrate specificity Mol.Microbiol., 79, 2011
6P4J	Mouse norovirus complexed with GCDCA 分子名称: Capsid protein, GLYCOCHENODEOXYCHOLIC ACID 著者 Smith, T.J, Smith, T.J. 登録日 2019-05-27 公開日 2019-08-07 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Bile Salts Alter the Mouse Norovirus Capsid Conformation: Possible Implications for Cell Attachment and Immune Evasion. J.Virol., 93, 2019
7S7X	Crystal structure of iCytSnFR Cytisine Sensor precursor binding protein with varenicline bound 分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, DI(HYDROXYETHYL)ETHER, VARENICLINE, ... 著者 Fan, C, Nichols, N.L, Luebbert, L, Looger, L.L, Lester, H.A, Rees, D.C. 登録日 2021-09-17 公開日 2021-10-13 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structure, Function, and Application of Bacterial ABC Transporters Ph.D.Thesis,California Institute of Technology, 2020
6P5E	Photoactive Yellow Protein PYP 80ps 分子名称: Photoactive yellow protein 著者 Pandey, S, Schmidt, M. 登録日 2019-05-30 公開日 2019-09-18 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Time-resolved serial femtosecond crystallography at the European XFEL. Nat.Methods, 17, 2020
7S7U	Crystal structure of iNicSnFR3a Fluorescent Nicotine Sensor with nicotine bound 分子名称: iNicSnFR 3.0 Fluorescent Nicotine Sensor 著者 Fan, C, Shivange, A.V, Looger, L.L, Lester, H.A, Rees, D.C. 登録日 2021-09-17 公開日 2021-10-13 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Correction: Fluorescence activation mechanism and imaging of drug permeation with new sensors for smoking-cessation ligands. Elife, 11, 2022
6P69	Crystal structure of FGFR1-Y563C (FGFR4 surrogate) covalently bound to compound 11. 分子名称: 1,2-ETHANEDIOL, Fibroblast growth factor receptor 1, N-{2-[(6-{[(2,6-dichloro-3,5-dimethoxyphenyl)carbamoyl][3-(4-methylpiperazin-1-yl)propyl]amino}pyrimidin-4-yl)amino]phenyl}prop-2-enamide, ... 著者 Larsen, N.A. 登録日 2019-06-03 公開日 2019-06-19 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 To be published TBD
4CZW	Structure of the Neurospora crassa Pan2 catalytic unit (protease and nuclease domain) 分子名称: PAB-DEPENDENT POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN2, ZINC ION 著者 Christie, M, Izaurralde, E, Weichenrieder, O. 登録日 2014-04-22 公開日 2014-06-04 最終更新日 2014-07-16 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 An Asymmetric Pan3 Dimer Recruits a Single Pan2 Exonuclease to Mediate Mrna Deadenylation and Decay. Nat.Struct.Mol.Biol., 21, 2014
6OZD	Crystal structure of Putative exported protein (BPSS2145) from Burkholderia pseudomallei K96243 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Putative exported protein 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2019-05-15 公開日 2019-06-12 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Crystal structure of Putative exported protein (BPSS2145) from Burkholderia pseudomallei K96243 TO BE PUBLISHED
4D05	Structure and activity of a minimal-type ATP-dependent DNA ligase from a psychrotolerant bacterium 分子名称: ADENOSINE MONOPHOSPHATE, ATP-DEPENDENT DNA LIGASE, MAGNESIUM ION, ... 著者 Williamson, A, Rothweiler, U, Leiros, H.-K.S. 登録日 2014-04-24 公開日 2014-11-12 最終更新日 2019-06-26 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Enzyme-Adenylate Structure of a Bacterial ATP-Dependent DNA Ligase with a Minimized DNA-Binding Surface Acta Crystallogr.,Sect.D, 70, 2014
7SH3	Crystal Structure of a VirB8-like Protein of Type IV Secretion System from Rickettsia typhi in Complex with a Synthetic VirB8 Miniprotein Binder 分子名称: Synthetic VirB8 Miniprotein Binder, VirB8-like protein of type IV secretion system 著者 Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2021-10-07 公開日 2021-10-20 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal Structure of a VirB8-like Protein of Type IV Secretion System from Rickettsia typhi in Complex with a Synthetic VirB8 Miniprotein Binder to be published
6EYY	Anti-CRISPR AcrIIa6 cubic form 分子名称: AcrIIa6 著者 Cambillau, C, Amigues, B, Moineau, S. 登録日 2017-11-13 公開日 2018-06-06 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Widespread anti-CRISPR proteins in virulent bacteriophages inhibit a range of Cas9 proteins. Nat Commun, 9, 2018

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