PDB: 46984 件ウェブページステータス検索Chemie searchBIRD

---

8P4P	Structure average of GroEL14 complexes found in the cytosol of Escherichia coli overexpressing GroEL obtained by cryo electron tomography 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Chaperonin GroEL, ... 著者 Wagner, J, Caravajal, A.I, Beck, F, Bracher, A, Wan, W, Bohn, S, Koerner, R, Baumeister, W, Fernandez-Busnadiego, R, Hartl, F.U. 登録日 2023-05-23 公開日 2024-07-03 実験手法 ELECTRON MICROSCOPY (9.6 Å) 主引用文献 Visualizing chaperonin function in situ by cryo-electron tomography Nature, 2024
8P8U	Yeast 60S ribosomal subunit 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Rabl, J, Banerjee, A, Boehringer, D, Zavolan, M. 登録日 2023-06-02 公開日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.23 Å) 主引用文献 Yeast 60S ribosomal subunit To Be Published
8P65	Cytochrome bc1 complex (Bos taurus) 分子名称: Cytochrome b, Cytochrome b-c1 complex subunit 1, mitochondrial, ... 著者 Phillips, B.P, Barra, I.M.C.C, Meier, T.K, Rimle, L, von Ballmoos, C. 登録日 2023-05-25 公開日 2024-07-03 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Cytochrome bc1 complex (Bos taurus) To Be Published
1EOL	Design of P1' and P3' residues of trivalent thrombin inhibitors and their crystal structures 分子名称: ALPHA THROMBIN, THROMBIN INHIBITOR P628 著者 Slon-Usakiewicz, J.J, Sivaraman, J, Li, Y, Cygler, M, Konishi, Y. 登録日 2000-03-23 公開日 2000-05-03 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Design of P1' and P3' residues of trivalent thrombin inhibitors and their crystal structures. Biochemistry, 39, 2000
7OKY	Structure of active transcription elongation complex Pol II-DSIF-ELL2-EAF1(composite structure) 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Chen, Y, Vos, S.M, Dienemann, C, Ninov, M, Urlaub, H, Cramer, P. 登録日 2021-05-18 公開日 2021-07-14 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (4.14 Å) 主引用文献 Allosteric transcription stimulation by RNA polymerase II super elongation complex. Mol.Cell, 81, 2021
4R8P	Crystal structure of the Ring1B/Bmi1/UbcH5c PRC1 ubiquitylation module bound to the nucleosome core particle 分子名称: DNA (147-mer), E3 ubiquitin-protein ligase RING2, Ubiquitin-conjugating enzyme E2 D3, ... 著者 McGinty, R.K, Henrici, R.C, Tan, S. 登録日 2014-09-02 公開日 2014-11-05 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.2846 Å) 主引用文献 Crystal structure of the PRC1 ubiquitylation module bound to the nucleosome. Nature, 514, 2014
7F0D	Cryo-EM structure of Mycobacterium tuberculosis 50S ribosome subunit bound with clarithromycin 分子名称: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Zhang, W, Sun, Y, Gao, N, Li, Z. 登録日 2021-06-03 公開日 2022-06-29 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Cryo-EM structure of Mycobacterium tuberculosis 50S ribosomal subunit bound with clarithromycin reveals dynamic and specific interactions with macrolides. Emerg Microbes Infect, 11, 2022
8QKT	Structure of a nucleosome composed of a palindromic 167-base pair blunt-ended DNA fragment 分子名称: DNA (167-MER), Histone H2A, Histone H2B type 1-J, ... 著者 Ma, Z, Davey, C.A. 登録日 2023-09-17 公開日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.261 Å) 主引用文献 Structure of a nucleosome composed of a palindromic 167-base pair blunt-ended DNA fragment To Be Published
6H68	Yeast RNA polymerase I elongation complex stalled by cyclobutane pyrimidine dimer (CPD) with fully-ordered A49 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Sanz-Murillo, M, Xu, J, Gil-Carton, D, Wang, D, Fernandez-Tornero, C. 登録日 2018-07-26 公開日 2018-08-29 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Structural basis of RNA polymerase I stalling at UV light-induced DNA damage. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5KK5	AsCpf1(E993A)-crRNA-DNA ternary complex 分子名称: CRISPR-associated endonuclease Cpf1, DNA (28-MER), DNA (8-mer), ... 著者 Gao, P, Yang, H, Rajashankar, K.R, Huang, Z, Patel, D.J. 登録日 2016-06-21 公開日 2016-08-10 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (3.289 Å) 主引用文献 Type V CRISPR-Cas Cpf1 endonuclease employs a unique mechanism for crRNA-mediated target DNA recognition. Cell Res., 26, 2016
1EOJ	Design of P1' and P3' residues of trivalent thrombin inhibitors and their crystal structures 分子名称: ALPHA THROMBIN, THROMBIN INHIBITOR P798 著者 Slon-Usakiewicz, J.J, Sivaraman, J, Li, Y, Cygler, M, Konishi, Y. 登録日 2000-03-23 公開日 2000-05-03 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Design of P1' and P3' residues of trivalent thrombin inhibitors and their crystal structures. Biochemistry, 39, 2000
5W51	Pol II elongation complex with an N6-methyladenine-containing template and a matched UMPNPP 分子名称: 14mer non-template DNA, 29mer template DNA, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, ... 著者 Wang, W, Wang, D. 登録日 2017-06-13 公開日 2018-06-20 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.404 Å) 主引用文献 Epigenetic DNA Modification N6-Methyladenine Causes Site-Specific RNA Polymerase II Transcriptional Pausing. J.Am.Chem.Soc., 139, 2017
6H67	Yeast RNA polymerase I elongation complex stalled by cyclobutane pyrimidine dimer (CPD) 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Sanz-Murillo, M, Xu, J, Gil-Carton, D, Wang, D, Fernandez-Tornero, C. 登録日 2018-07-26 公開日 2018-08-29 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural basis of RNA polymerase I stalling at UV light-induced DNA damage. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6GQV	Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP) 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Pellegrino, S, Yusupov, M, Yusupova, G, Hashem, Y. 登録日 2018-06-08 公開日 2018-07-11 最終更新日 2018-08-08 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Structural Insights into the Role of Diphthamide on Elongation Factor 2 in mRNA Reading-Frame Maintenance. J. Mol. Biol., 430, 2018
5LMX	Monomeric RNA polymerase I at 4.9 A resolution 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Torreira, E, Louro, J.A, Gil-Carton, D, Gallego, O, Calvo, O, Fernandez-Tornero, C. 登録日 2016-08-02 公開日 2017-03-22 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.9 Å) 主引用文献 The dynamic assembly of distinct RNA polymerase I complexes modulates rDNA transcription. Elife, 6, 2017
4U4Q	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome 分子名称: (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine, 18S ribosomal RNA, 25S ribosomal RNA, ... 著者 Garreau de Loubresse, N, Prokhorova, I, Yusupova, G, Yusupov, M. 登録日 2014-07-24 公開日 2014-10-22 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural basis for the inhibition of the eukaryotic ribosome. Nature, 513, 2014
4U3U	Crystal structure of Cycloheximide bound to the yeast 80S ribosome 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ... 著者 Garreau de Loubresse, N, Prokhorova, I, Yusupova, G, Yusupov, M. 登録日 2014-07-22 公開日 2014-10-22 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural basis for the inhibition of the eukaryotic ribosome. Nature, 513, 2014
2XZ6	MTSET-modified Y53C mutant of Aplysia AChBP 分子名称: 2-(TRIMETHYLAMMONIUM)ETHYL THIOL, SOLUBLE ACETYLCHOLINE RECEPTOR 著者 Brams, M, Gay, E.A, Colon Saez, J, Guskov, A, Van Elk, R, Van Der Schors, R.C, Peigneur, S, Tytgat, J, Strelkov, S.V, Smit, A.B, Yakel, J.L, Ulens, C. 登録日 2010-11-23 公開日 2010-12-08 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.137 Å) 主引用文献 Crystal Structures of a Cysteine-Modified Mutant in Loop D of Acetylcholine Binding Protein J.Biol.Chem., 286, 2011
4U53	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome 分子名称: (3beta,7alpha)-3,7,15-trihydroxy-12,13-epoxytrichothec-9-en-8-one, 18S ribosomal RNA, 25S ribosomal RNA, ... 著者 Garreau de Loubresse, N, Prokhorova, I, Yusupova, G, Yusupov, M. 登録日 2014-07-24 公開日 2014-10-22 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Structural basis for the inhibition of the eukaryotic ribosome. Nature, 513, 2014
4U4Y	Crystal structure of Pactamycin bound to the yeast 80S ribosome 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Garreau de Loubresse, N, Prokhorova, I, Yusupova, G, Yusupov, M. 登録日 2014-07-24 公開日 2014-10-22 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural basis for the inhibition of the eukaryotic ribosome. Nature, 513, 2014
5LQX	Structure of F-ATPase from Pichia angusta, state3 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase AAP1 subunit, ... 著者 Vinothkumar, K.R, Montgomery, M.G, Liu, S, Walker, J.E. 登録日 2016-08-17 公開日 2016-11-16 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (7.9 Å) 主引用文献 Structure of the mitochondrial ATP synthase fromPichia angustadetermined by electron cryo-microscopy. Proc. Natl. Acad. Sci. U.S.A., 113, 2016
4U3M	Crystal structure of Anisomycin bound to the yeast 80S ribosome 分子名称: 18S rRNA, 25s rRNA, 40S ribosomal protein S0-A, ... 著者 Garreau de Loubresse, N, Prokhorova, I, Yusupova, G, Yusupov, M. 登録日 2014-07-22 公開日 2014-10-22 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural basis for the inhibition of the eukaryotic ribosome. Nature, 513, 2014
5JBH	Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-IN conformation 分子名称: 16S ribosomal RNA, 30S ribosomal protein SX, 30S ribosomal protein eL41, ... 著者 Coureux, P.-D, Schmitt, E, Mechulam, Y. 登録日 2016-04-13 公開日 2016-12-07 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (5.34 Å) 主引用文献 Cryo-EM study of start codon selection during archaeal translation initiation. Nat Commun, 7, 2016
3J6J	3.6 Angstrom resolution MAVS filament generated from helical reconstruction 分子名称: Mitochondrial antiviral-signaling protein 著者 Wu, B, Peisley, A, Li, Z, Egelman, E, Walz, T, Penczek, P, Hur, S. 登録日 2014-03-13 公開日 2014-07-30 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (3.64 Å) 主引用文献 Molecular Imprinting as a Signal-Activation Mechanism of the Viral RNA Sensor RIG-I. Mol.Cell, 55, 2014
5J4B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Melnikov, S.V, Soll, D, Steitz, T.A, Polikanov, Y.S. 登録日 2016-03-31 公開日 2016-04-27 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Insights into RNA binding by the anticancer drug cisplatin from the crystal structure of cisplatin-modified ribosome. Nucleic Acids Res., 44, 2016

<398399400401402403404405406407408409410411412413>