PDB: 1170 件ウェブページステータス検索Chemie searchBIRD

---

4WEM	Co-complex structure of the F4 fimbrial adhesin FaeG variant ac with llama single domain antibody V1 分子名称: Anti-F4+ETEC bacteria VHH variable region, K88 fimbrial protein AC, PHOSPHATE ION 著者 Moonens, K, Van den Broeck, I, Pardon, E, De Kerpel, M, Remaut, H, De Greve, H. 登録日 2014-09-10 公開日 2015-02-04 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structural insight in the inhibition of adherence of F4 fimbriae producing enterotoxigenic Escherichia coli by llama single domain antibodies. Vet. Res., 46, 2015
6YHW	Co-crystals in the P212121 space group, of a beta-cyclodextrin spacered by triazole heptyl from alpha-D-mannose, with FimH lectin at 2.00 A resolution. 分子名称: 2H-1,2,3-TRIAZOL-4-YLMETHANOL, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), FimH, ... 著者 de Ruyck, J, Bouckaert, J. 登録日 2020-03-31 公開日 2020-05-06 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.962 Å) 主引用文献 The Antiadhesive Strategy in Crohn's Disease: Orally Active Mannosides to Decolonize Pathogenic Escherichia coli from the Gut. Chembiochem, 17, 2016
2XKM	Consensus structure of Pf1 filamentous bacteriophage from X-ray fibre diffraction and solid-state NMR 分子名称: CAPSID PROTEIN G8P 著者 Straus, S.K, P Scott, W.R, Schwieters, C.D, Marvin, D.A. 登録日 2010-07-09 公開日 2010-11-24 最終更新日 2023-12-20 実験手法 FIBER DIFFRACTION (3.3 Å), SOLID-STATE NMR 主引用文献 Consensus Structure of Pf1 Filamentous Bacteriophage from X-Ray Fibre Diffraction and Solid-State NMR. Eur.Biophys.J., 40, 2011
6XKY	Caulobacter crescentus FljK filament, straightened 分子名称: Flagellin 著者 Montemayor, E.J, Ploscariu, N.T, Sanchez, J.C, Parrell, D, Dillard, R.S, Shebelut, C.W, Ke, Z, Guerrero-Ferreira, R.C, Wright, E.R. 登録日 2020-06-27 公開日 2020-12-23 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Flagellar Structures from the Bacterium Caulobacter crescentus and Implications for Phage phi CbK Predation of Multiflagellin Bacteria J.Bacteriol., 203, 2021
5YA6	Crystal structure of archaeal flagellin FlaB1 from Methanocaldococcus jannaschii 分子名称: CALCIUM ION, Flagellin B1 著者 Meshcheryakov, V.A, Wolf, M. 登録日 2017-08-30 公開日 2019-02-06 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 High-resolution archaellum structure reveals a conserved metal-binding site. Embo Rep., 20, 2019
2XWG	Crystal structure of sortase C-1 from Actinomyces oris (formerly Actinomyces naeslundii) 分子名称: CALCIUM ION, SORTASE 著者 Persson, K. 登録日 2010-11-02 公開日 2011-02-23 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of the Sortase Acsrtc-1 from Actinomyces Oris Acta Crystallogr.,Sect.D, 67, 2011
6XL0	Caulobacter crescentus FljK filament 分子名称: Flagellin 著者 Montemayor, E.J, Ploscariu, N.T, Sanchez, J.C, Parrell, D, Dillard, R.S, Shebelut, C.W, Ke, Z, Guerrero-Ferreira, R.C, Wright, E.R. 登録日 2020-06-27 公開日 2020-12-23 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Flagellar Structures from the Bacterium Caulobacter crescentus and Implications for Phage phi CbK Predation of Multiflagellin Bacteria J.Bacteriol., 203, 2021
7BHD	FimH in complex with alpha1,6 core-fucosylated oligomannose-3, crystallized in the trigonal space group 分子名称: NICKEL (II) ION, SULFATE ION, Type 1 fimbrin D-mannose specific adhesin, ... 著者 Bridot, C, Bouckaert, J, Krammer, E.-M. 登録日 2021-01-11 公開日 2022-07-20 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Structural insights into a cooperative switch between one and two FimH bacterial adhesins binding pauci- and high-mannose type N-glycan receptors. J.Biol.Chem., 299, 2023
7AYN	Crystal structure of the lectin domain of the FimH variant Arg98Ala, in complex with Methyl 3-chloro-4-D-mannopyranosyloxy-3-biphenylcarboxylate 分子名称: 1,2-ETHANEDIOL, Type 1 fimbrin D-mannose specific adhesin, methyl 3-[3-chloranyl-4-[(2~{R},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-phenyl]benzoate 著者 Jakob, R.P, Tomasic, T, Rabbani, S, Reisner, A, Jakopin, Z, Maier, T, Ernst, B, Anderluh, M. 登録日 2020-11-12 公開日 2020-12-23 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 Does targeting Arg98 of FimH lead to high affinity antagonists? Eur.J.Med.Chem., 211, 2020
6QAY	Structural investigation of the TasA anchoring protein TapA from Bacillus subtilis 分子名称: TasA anchoring/assembly protein 著者 Higman, V.A, Schmieder, P, Diehl, A, Oschkinat, H. 登録日 2018-12-20 公開日 2020-01-29 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 TapA acts as specific chaperone in TasA filament formation by strand complementation. Proc.Natl.Acad.Sci.USA, 120, 2023
2KID	Solution Structure of the S. Aureus Sortase A-substrate Complex 分子名称: (PHQ)LPA(B27) peptide, CALCIUM ION, Sortase 著者 Suree, N, Liew, C.K, Villareal, V.A, Thieu, W, Fadeev, E.A, Clemens, J.J, Jung, M.E, Clubb, R.T. 登録日 2009-05-01 公開日 2009-07-21 最終更新日 2023-11-15 実験手法 SOLUTION NMR 主引用文献 The structure of the Staphylococcus aureus sortase-substrate complex reveals how the universally conserved LPXTG sorting signal is recognized. J.Biol.Chem., 284, 2009
8JWX	bottom segment of the bacteriophage M13 mini variant 分子名称: Attachment protein G3P, Capsid protein G8P, Head virion protein G6P 著者 Xiang, Y, Jia, Q. 登録日 2023-06-29 公開日 2024-01-03 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Cryo-EM structure of a bacteriophage M13 mini variant To Be Published
8IXK	bottom segment of the bacteriophage M13 mini variant 分子名称: Attachment protein G3P, Capsid protein G8P, Head virion protein G6P 著者 Xiang, Y, Jia, Q. 登録日 2023-04-01 公開日 2023-09-13 最終更新日 2023-09-20 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Cryo-EM structure of a bacteriophage M13 mini variant. Nat Commun, 14, 2023
1OIO	GafD (F17c-type) Fimbrial adhesin from Escherichia coli 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, FIMBRIAL LECTIN 著者 Merckel, M.C, Tanskanen, J, Edelman, S, Westerlund-Wikstrom, B, Korhonen, T.K, Goldman, A. 登録日 2003-06-22 公開日 2003-08-15 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The Structural Basis of Receptor-Binding by Escherichia Coli Associated with Diarrhea and Septicemia J.Mol.Biol., 331, 2003
6HQC	Structural investigation of the TasA anchoring protein TapA from Bacillus subtilis 分子名称: 1,2-ETHANEDIOL, TasA anchoring/assembly protein 著者 Roske, Y, Heinemann, U. 登録日 2018-09-24 公開日 2019-10-09 最終更新日 2023-04-26 実験手法 X-RAY DIFFRACTION (1.28 Å) 主引用文献 TapA acts as specific chaperone in TasA filament formation by strand complementation. Proc.Natl.Acad.Sci.USA, 120, 2023
6LAD	Crystal structure of Amuc_1100 from Akkermansia muciniphila 分子名称: Amuc_1100 著者 Wang, J, Xiang, R, Zhang, M, Wang, M. 登録日 2019-11-12 公開日 2020-08-05 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 The variable oligomeric state of Amuc_1100 from Akkermansia muciniphila. J.Struct.Biol., 212, 2020
6LAF	Crystal structure of the core domain of Amuc_1100 from Akkermansia muciniphila 分子名称: Amuc_1100, SULFATE ION 著者 Wang, J, Xiang, R, Zhang, M, Wang, M. 登録日 2019-11-12 公開日 2020-08-05 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (3.001 Å) 主引用文献 The variable oligomeric state of Amuc_1100 from Akkermansia muciniphila. J.Struct.Biol., 212, 2020
2HI5	Model for bacteriophage fd from cryo-EM 分子名称: Coat protein B 著者 Wang, Y.A, Yu, X, Overman, S, Tsuboi, M, Thomas, G.J, Egelman, E.H. 登録日 2006-06-29 公開日 2007-08-07 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (8 Å) 主引用文献 The Structure of a Filamentous Bacteriophage J.Mol.Biol., 361, 2006
6V7B	Cryo-EM reconstruction of Pyrobaculum filamentous virus 2 (PFV2) 分子名称: A-DNA, Structural protein VP1, Structural protein VP2 著者 Wang, F, Baquero, D.P, Su, Z, Prangishvili, D, Krupovic, M, Egelman, E.H. 登録日 2019-12-08 公開日 2020-04-01 最終更新日 2020-05-20 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of a filamentous virus uncovers familial ties within the archaeal virosphere. Virus Evol, 6, 2020
5X3T	VapBC from Mycobacterium tuberculosis 分子名称: Antitoxin VapB26, MAGNESIUM ION, Ribonuclease VapC26 著者 Kang, S.M, Kim, D.H, Yoon, H.J, Lee, B.J. 登録日 2017-02-07 公開日 2017-06-07 最終更新日 2017-12-06 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Functional details of the Mycobacterium tuberculosis VapBC26 toxin-antitoxin system based on a structural study: insights into unique binding and antibiotic peptides. Nucleic Acids Res., 45, 2017
5AAP	Complex of the FimH lectin with a C-linked para-biphenyl methylene alpha-D-mannoside 分子名称: 1,2-ETHANEDIOL, FIMH, GLYCEROL, ... 著者 De Ruyck, J, Bouckaert, J. 登録日 2015-07-27 公開日 2016-03-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.302 Å) 主引用文献 Structures of C-Mannosylated Anti-Adhesives Bound to the Type 1 Fimbrial Fimh Adhesin Iucrj, 3, 2016
3MCY	Crystal structure of FimH lectin domain bound to biphenyl mannoside meta-methyl ester. 分子名称: CALCIUM ION, CHLORIDE ION, FimH, ... 著者 Ford, B.A, Hultgren, S.J. 登録日 2010-03-29 公開日 2010-06-16 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structure-based drug design and optimization of mannoside bacterial FimH antagonists. J.Med.Chem., 53, 2010
5DHM	Crystal structure of the fimbrial protein Mfa4 from Porphyromonas gingivalis 分子名称: Immunoreactive 32 kDa antigen 著者 Kloppsteck, P, Hall, M, Persson, K. 登録日 2015-08-31 公開日 2016-04-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of the fimbrial protein Mfa4 from Porphyromonas gingivalis in its precursor form: implications for a donor-strand complementation mechanism. Sci Rep, 6, 2016
1R8I	Crystal structure of TraC 分子名称: TraC 著者 Yeo, H.-J, Yuan, Q, Beck, M.R, Baron, C, Waksman, G. 登録日 2003-10-24 公開日 2004-01-06 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural and functional characterization of the VirB5 protein from the type IV secretion system encoded by the conjugative plasmid pKM101 Proc.Natl.Acad.Sci.USA, 100, 2003
6OJ0	Cryo-EM reconstruction of Sulfolobus polyhedral virus 1 (SPV1) 分子名称: Structural protein VP4, Uncharacterized protein 著者 Wang, F, Liu, Y, Conway, J.F, Krupovic, M, Prangishvili, D, Egelman, E.H. 登録日 2019-04-10 公開日 2019-10-02 最終更新日 2020-01-08 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 A packing for A-form DNA in an icosahedral virus. Proc.Natl.Acad.Sci.USA, 116, 2019

<32333435363738394041424344454647>