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6NJQ
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BU of 6njq by Molmil
Structure of TBP-Hoogsteen containing DNA complex
分子名称: DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*CP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*GP*TP*TP*TP*AP*TP*AP*GP*C)-3'), TATA-box-binding protein 1
著者Schumacher, M.A, Stelling, A.
登録日2019-01-04
公開日2019-10-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Infrared Spectroscopic Observation of a G-C+Hoogsteen Base Pair in the DNA:TATA-Box Binding Protein Complex Under Solution Conditions.
Angew.Chem.Int.Ed.Engl., 58, 2019
6O9L
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BU of 6o9l by Molmil
Human holo-PIC in the closed state
分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
著者Yan, C.L, Dodd, T, He, Y, Tainer, J.A, Tsutakawa, S.E, Ivanov, I.
登録日2019-03-14
公開日2019-05-29
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (7.2 Å)
主引用文献Transcription preinitiation complex structure and dynamics provide insight into genetic diseases.
Nat.Struct.Mol.Biol., 26, 2019
6UER
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BU of 6uer by Molmil
Crystal form 2: Structure of TBP bound to C-C mismatch at pH 7
分子名称: DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*CP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*CP*TP*TP*TP*AP*TP*AP*GP*C)-3'), TATA-box-binding protein 1
著者Schumacher, M.A, Al-Hashimi, H.
登録日2019-09-22
公開日2020-09-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献DNA mismatches reveal conformational penalties in protein-DNA recognition.
Nature, 587, 2020
6UEQ
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BU of 6ueq by Molmil
Structure of TBP bound to C-C mismatch containing TATA site
分子名称: DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*CP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*C)-3'), SULFATE ION, ...
著者Schumacher, M.A, Al-Hashimi, H.
登録日2019-09-22
公開日2020-09-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献DNA mismatches reveal conformational penalties in protein-DNA recognition.
Nature, 587, 2020
6UEP
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BU of 6uep by Molmil
Structure of A. thaliana TBP bound to a DNA site with a C-C mismatch
分子名称: DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*CP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*CP*TP*TP*TP*AP*TP*AP*GP*C)-3'), FORMIC ACID, ...
著者Schumacher, M.A, Al-hashimi, H.
登録日2019-09-22
公開日2020-09-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献DNA mismatches reveal conformational penalties in protein-DNA recognition.
Nature, 587, 2020
6UEO
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BU of 6ueo by Molmil
Structure of A. thaliana TBP-AC mismatch DNA site
分子名称: DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*CP*TP*TP*TP*AP*TP*AP*GP*C)-3'), TATA-box-binding protein 1
著者Schumacher, M.A.
登録日2019-09-22
公開日2020-09-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献DNA mismatches reveal conformational penalties in protein-DNA recognition.
Nature, 587, 2020
6TB4
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BU of 6tb4 by Molmil
Structure of SAGA bound to TBP
分子名称: SAGA-associated factor 73 (Sgf73), Spt20, Subunit (17 kDa) of TFIID and SAGA complexes, ...
著者Papai, G, Frechard, A, Kolesnikova, O, Crucifix, C, Schultz, P, Ben-Shem, A.
登録日2019-10-31
公開日2020-01-29
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of SAGA and mechanism of TBP deposition on gene promoters.
Nature, 577, 2020
6TBM
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BU of 6tbm by Molmil
Structure of SAGA bound to TBP, including Spt8 and DUB
分子名称: Polyubiquitin-B, SAGA-associated factor 11, Spt20, ...
著者Papai, G, Frechard, A, Kolesnikova, O, Crucifix, C, Schultz, P, Ben-Shem, A.
登録日2019-11-01
公開日2020-02-12
最終更新日2021-06-30
実験手法ELECTRON MICROSCOPY (20 Å)
主引用文献Structure of SAGA and mechanism of TBP deposition on gene promoters.
Nature, 577, 2020
7LBM
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BU of 7lbm by Molmil
Structure of the human Mediator-bound transcription pre-initiation complex
分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
著者Abdella, R, Talyzina, A, He, Y.
登録日2021-01-08
公開日2021-03-24
最終更新日2021-04-14
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Structure of the human Mediator-bound transcription preinitiation complex.
Science, 372, 2021
7NVR
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BU of 7nvr by Molmil
Human Mediator with RNA Polymerase II Pre-initiation complex
分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
著者Rengachari, S, Schilbach, S, Aibara, S, Cramer, P.
登録日2021-03-15
公開日2021-05-05
最終更新日2021-06-16
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structures of mammalian RNA polymerase II pre-initiation complexes.
Nature, 594, 2021
7NVT
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BU of 7nvt by Molmil
RNA polymerase II core pre-initiation complex with closed promoter DNA in distal position
分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ...
著者Aibara, S, Schilbach, S, Cramer, P.
登録日2021-03-16
公開日2021-05-05
最終更新日2021-06-16
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structures of mammalian RNA polymerase II pre-initiation complexes.
Nature, 594, 2021
7NW0
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BU of 7nw0 by Molmil
RNA polymerase II pre-initiation complex with open promoter DNA
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, CDK-activating kinase assembly factor MAT1, ...
著者Aibara, S, Schilbach, S, Cramer, P.
登録日2021-03-16
公開日2021-05-05
最終更新日2021-06-16
実験手法ELECTRON MICROSCOPY (6.6 Å)
主引用文献Structures of mammalian RNA polymerase II pre-initiation complexes.
Nature, 594, 2021
7NVZ
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BU of 7nvz by Molmil
RNA polymerase II pre-initiation complex with closed promoter DNA in distal position
分子名称: CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ...
著者Aibara, S, Schilbach, S, Cramer, P.
登録日2021-03-16
公開日2021-05-05
最終更新日2021-06-16
実験手法ELECTRON MICROSCOPY (7.2 Å)
主引用文献Structures of mammalian RNA polymerase II pre-initiation complexes.
Nature, 594, 2021
7NVS
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BU of 7nvs by Molmil
RNA polymerase II core pre-initiation complex with closed promoter DNA in proximal position
分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ...
著者Aibara, S, Schilbach, S, Cramer, P.
登録日2021-03-16
公開日2021-05-05
最終更新日2021-06-16
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structures of mammalian RNA polymerase II pre-initiation complexes.
Nature, 594, 2021
7NVY
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BU of 7nvy by Molmil
RNA polymerase II pre-initiation complex with closed promoter DNA in proximal position
分子名称: CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ...
著者Aibara, S, Schilbach, S, Cramer, P.
登録日2021-03-16
公開日2021-05-05
最終更新日2021-06-16
実験手法ELECTRON MICROSCOPY (7.3 Å)
主引用文献Structures of mammalian RNA polymerase II pre-initiation complexes.
Nature, 594, 2021
7NVU
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BU of 7nvu by Molmil
RNA polymerase II core pre-initiation complex with open promoter DNA
分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ...
著者Aibara, S, Schilbach, S, Cramer, P.
登録日2021-03-16
公開日2021-05-05
最終更新日2021-06-16
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Structures of mammalian RNA polymerase II pre-initiation complexes.
Nature, 594, 2021
7EDX
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BU of 7edx by Molmil
p53-bound TFIID-based core PIC on HDM2 promoter
分子名称: DNA (84-mer), DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ...
著者Chen, X, Qi, Y, Hou, H, Wang, X, Wu, Z, Li, J, Xu, Y.
登録日2021-03-17
公開日2021-05-05
最終更新日2021-05-19
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structural insights into preinitiation complex assembly on core promoters.
Science, 372, 2021
7EG7
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BU of 7eg7 by Molmil
TFIID-based core PIC on SCP promoter
分子名称: DNA (79-MER), DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ...
著者Chen, X, Qi, Y, Hou, H, Wang, X, Wu, Z, Li, J, Xu, Y.
登録日2021-03-24
公開日2021-05-05
最終更新日2021-05-19
実験手法ELECTRON MICROSCOPY (6.2 Å)
主引用文献Structural insights into preinitiation complex assembly on core promoters.
Science, 372, 2021
7EGB
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BU of 7egb by Molmil
TFIID-based holo PIC on SCP promoter
分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
著者Chen, X, Wu, Z, Hou, H, Qi, Y, Wang, X, Li, J, Xu, Y.
登録日2021-03-24
公開日2021-05-05
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural insights into preinitiation complex assembly on core promoters.
Science, 372, 2021
7EGF
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BU of 7egf by Molmil
TFIID lobe A subcomplex
分子名称: TATA-box-binding protein, Transcription initiation factor TFIID subunit 10, Transcription initiation factor TFIID subunit 11, ...
著者Chen, X, Wu, Z, Li, J, Zhao, D, Xu, Y.
登録日2021-03-24
公開日2021-05-05
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Structural insights into preinitiation complex assembly on core promoters.
Science, 2021
7EGA
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BU of 7ega by Molmil
TFIID-based intermediate PIC on PUMA promoter
分子名称: DNA (85-MER), DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ...
著者Chen, X, Wu, Z, Hou, H, Qi, Y, Wang, X, Li, J, Xu, Y.
登録日2021-03-24
公開日2021-05-05
最終更新日2021-05-19
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural insights into preinitiation complex assembly on core promoters.
Science, 372, 2021
7EG9
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BU of 7eg9 by Molmil
TFIID-based intermediate PIC on SCP promoter
分子名称: DNA (79-MER), DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ...
著者Chen, X, Qi, Y, Wang, X, Wu, Z, Li, J, Xu, Y.
登録日2021-03-24
公開日2021-05-05
最終更新日2021-05-19
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural insights into preinitiation complex assembly on core promoters.
Science, 372, 2021
7EG8
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BU of 7eg8 by Molmil
TFIID-based core PIC on PUMA promoter
分子名称: DNA (85-MER), DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ...
著者Chen, X, Qi, Y, Hou, H, Wang, X, Wu, Z, Li, J, Xu, Y.
登録日2021-03-24
公開日2021-05-05
最終更新日2021-05-19
実験手法ELECTRON MICROSCOPY (7.4 Å)
主引用文献Structural insights into preinitiation complex assembly on core promoters.
Science, 372, 2021
7EGI
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BU of 7egi by Molmil
TFIID in rearranged conformation
分子名称: TATA-box-binding protein, Transcription initiation factor IIA subunit 1, Transcription initiation factor IIA subunit 2, ...
著者Chen, X, Wu, Z, Li, J, Zhao, D, Xu, Y.
登録日2021-03-24
公開日2021-05-12
実験手法ELECTRON MICROSCOPY (9.82 Å)
主引用文献Structural insights into preinitiation complex assembly on core promoters.
Science, 372, 2021
7EGD
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BU of 7egd by Molmil
SCP promoter-bound TFIID-TFIIA in initial TBP-loading state
分子名称: DNA (72-MER), TATA-box-binding protein, Transcription initiation factor IIA subunit 1, ...
著者Chen, X, Wu, Z, Li, J, Zhao, D, Xu, Y.
登録日2021-03-24
公開日2021-05-12
実験手法ELECTRON MICROSCOPY (6.75 Å)
主引用文献Structural insights into preinitiation complex assembly on core promoters.
Science, 372, 2021

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件を2024-06-12に公開中

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