PDB: 511 件ウェブページステータス検索Chemie searchBIRD

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6XHF	Structure of Phenylalanyl-5'-O-adenosine phosphoramidate 分子名称: (2~{S})-2-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]amino]-3-phenyl-propanoic acid, CHLORIDE ION, Ribonuclease pancreatic 著者 Pallan, P.S, Egli, M. 登録日 2020-06-18 公開日 2021-03-17 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 The Enzyme-Free Release of Nucleotides from Phosphoramidates Depends Strongly on the Amino Acid. Angew.Chem.Int.Ed.Engl., 59, 2020
5OAB	A novel crystal form of human RNase6 at atomic resolution 分子名称: CHLORIDE ION, PHOSPHATE ION, POTASSIUM ION, ... 著者 Prats-Ejarque, G, Moussaoui, M, Boix, E. 登録日 2017-06-21 公開日 2018-08-01 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.111 Å) 主引用文献 Characterization of an RNase with two catalytic centers. Human RNase6 catalytic and phosphate-binding site arrangement favors the endonuclease cleavage of polymeric substrates. Biochim Biophys Acta Gen Subj, 1863, 2019
5OGH	Structure of RNase A at high resolution (1.16 A) in complex with 3'-CMP and sulphate ions 分子名称: CHLORIDE ION, CYTIDINE-3'-MONOPHOSPHATE, Ribonuclease pancreatic, ... 著者 Blanco, J.A, Prats-Ejarque, G, Salazar, V.A, Moussaoui, M, Boix, E. 登録日 2017-07-13 公開日 2018-08-01 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.16 Å) 主引用文献 Characterization of an RNase with two catalytic centers. Human RNase6 catalytic and phosphate-binding site arrangement favors the endonuclease cleavage of polymeric substrates. Biochim Biophys Acta Gen Subj, 1863, 2019
4L55	X-ray structure of the adduct between bovine pancreatic ribonuclease and AziRu 分子名称: RUTHENIUM ION, Ribonuclease pancreatic 著者 Vergara, A, Russo Krauss, I, Merlino, A. 登録日 2013-06-10 公開日 2014-01-29 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Investigating the ruthenium metalation of proteins: X-ray structure and Raman microspectroscopy of the complex between RNase A and AziRu. Inorg.Chem., 52, 2013
5NJ7	The X-ray structure of the adduct formed in the reaction between bovine pancreatic ribonuclease and arsenoplatin-1 分子名称: Ribonuclease pancreatic, arsenoplatin-1 著者 Ferraro, G, Merlino, A. 登録日 2017-03-28 公開日 2018-05-16 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Arsenoplatin-1 Is a Dual Pharmacophore Anticancer Agent. J.Am.Chem.Soc., 141, 2019
6XVX	X-ray structure obtained upon reaction of dirhodium tetraacetate with RNase A (high resolution) 分子名称: ACETATE ION, RHODIUM(III) ION, Ribonuclease pancreatic 著者 Merlino, A, Ferraro, G. 登録日 2020-01-22 公開日 2020-02-19 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Protein interactions of dirhodium tetraacetate: a structural study. Dalton Trans, 49, 2020
6XW0	X-ray structure obtained upon reaction of dirhodium tetraacetate with RNase A (low resolution) 分子名称: ACETATE ION, RHODIUM(III) ION, Ribonuclease pancreatic 著者 Merlino, A, Ferraro, G. 登録日 2020-01-22 公開日 2020-02-19 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Protein interactions of dirhodium tetraacetate: a structural study. Dalton Trans, 49, 2020
4O37	seminsynthetic RNase S1-15-3Pl-7/11 分子名称: CHLORIDE ION, Ribonuclease pancreatic, S-peptide, ... 著者 Genz, M, Strater, N. 登録日 2013-12-18 公開日 2014-05-07 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 An Artificial Imine Reductase based on the Ribonuclease S Scaffold Chem.Cat.Chem, 2014
6YO1	Crystal structure of ribonuclease A solved by vanadium SAD phasing 分子名称: Ribonuclease pancreatic, URIDINE-2',3'-VANADATE 著者 El Omari, K, Mohamad, N, Bountra, K, Duman, R, Romano, M, Schlegel, K, Kwong, H, Mykhaylyk, V, Olesen, C.E, Moller, J.V, Bublitz, M, Beis, K, Wagner, A. 登録日 2020-04-14 公開日 2020-11-04 最終更新日 2020-12-02 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Experimental phasing with vanadium and application to nucleotide-binding membrane proteins. Iucrj, 7, 2020
5OBC	X-ray structure of the adduct formed upon reaction of ribonuclease A with the compound fac-[RuII(CO)3Cl2(N3-IM), IM=imidazole 分子名称: PHOSPHATE ION, Ribonuclease pancreatic, pentakis(oxidaniumyl)-(oxidaniumylidynemethyl)ruthenium, ... 著者 Pontillo, N, Ferraro, G, Merlino, A. 登録日 2017-06-26 公開日 2017-07-26 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 Ru-Based CO releasing molecules with azole ligands: interaction with proteins and the CO release mechanism disclosed by X-ray crystallography. Dalton Trans, 46, 2017
8OQC	Dirhodium tetraacetate/ribonuclease A adduct in the P3221 space group (1 h soaking) 分子名称: CHLORIDE ION, FORMIC ACID, Ribonuclease pancreatic, ... 著者 Loreto, D, Merlino, A, Maity, B, Ueno, T. 登録日 2023-04-12 公開日 2023-06-14 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Cross-Linked Crystals of Dirhodium Tetraacetate/RNase A Adduct Can Be Used as Heterogeneous Catalysts. Inorg.Chem., 62, 2023
8OQG	Cross-linked crystal of dirhodium tetraacetate/ribonuclease A adduct in the P3221 space group (high temperature data collection) 分子名称: CHLORIDE ION, FORMIC ACID, Ribonuclease pancreatic, ... 著者 Loreto, D, Merlino, A, Maity, B, Ueno, T. 登録日 2023-04-12 公開日 2023-06-14 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Cross-Linked Crystals of Dirhodium Tetraacetate/RNase A Adduct Can Be Used as Heterogeneous Catalysts. Inorg.Chem., 62, 2023
4O36	Semisynthetic RNase S1-15-H7/11-Q10 分子名称: CHLORIDE ION, Ribonuclease pancreatic, S-peptide, ... 著者 Genz, M, Strater, N. 登録日 2013-12-18 公開日 2014-05-07 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.22 Å) 主引用文献 An Artificial Imine Reductase based on the Ribonuclease S scaffold Chem.Cat.Chem, 2014
8OQD	Dirhodium tetraacetate/ribonuclease A adduct in the P3221 space group (1 h soaking) 分子名称: CHLORIDE ION, FORMIC ACID, Ribonuclease pancreatic, ... 著者 Loreto, D, Merlino, A, Maity, B, Ueno, T. 登録日 2023-04-12 公開日 2023-06-14 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 Cross-Linked Crystals of Dirhodium Tetraacetate/RNase A Adduct Can Be Used as Heterogeneous Catalysts. Inorg.Chem., 62, 2023
8OQE	Dirhodium tetraacetate/ribonuclease A adduct in the P3221 space group (6 h soaking) 分子名称: CHLORIDE ION, FORMIC ACID, Ribonuclease pancreatic, ... 著者 Loreto, D, Merlino, A, Maity, B, Ueno, T. 登録日 2023-04-12 公開日 2023-06-14 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Cross-Linked Crystals of Dirhodium Tetraacetate/RNase A Adduct Can Be Used as Heterogeneous Catalysts. Inorg.Chem., 62, 2023
8OQF	Cross-linked crystal of Dirhodium tetraacetate/ribonuclease A adduct in the P3221 space group (low temperature data collection) 分子名称: (mi2-acetato-O, O')-hexaaquo-dirhodium (II), CHLORIDE ION, ... 著者 Loreto, D, Merlino, A, Maity, B, Ueno, T. 登録日 2023-04-12 公開日 2023-06-14 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Cross-Linked Crystals of Dirhodium Tetraacetate/RNase A Adduct Can Be Used as Heterogeneous Catalysts. Inorg.Chem., 62, 2023
8OO3	X-ray structure of the adduct formed upon reaction of cisplatin with human angiogenin after 5 days soaking 分子名称: AMMONIA, Angiogenin, D(-)-TARTARIC ACID, ... 著者 Ferraro, G, Merlino, A. 登録日 2023-04-04 公開日 2023-07-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Cisplatin binding to angiogenin protein: new molecular pathways and targets for the drug's anticancer activity. Dalton Trans, 52, 2023
8OO4	X-ray structure of the adduct formed upon reaction of cisplatin with human angiogenin after 1 month soaking 分子名称: AMMONIA, Angiogenin, PLATINUM (II) ION 著者 Ferraro, G, Merlino, A. 登録日 2023-04-04 公開日 2023-07-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Cisplatin binding to angiogenin protein: new molecular pathways and targets for the drug's anticancer activity. Dalton Trans, 52, 2023
4N4C	Crystal structure of the C-terminal swapped dimer of a Bovine seminal ribonuclease mutant 分子名称: PHOSPHATE ION, Seminal ribonuclease 著者 Pica, A, Russo Krauss, I, Merlino, A, Sica, F. 登録日 2013-10-08 公開日 2013-11-06 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.48 Å) 主引用文献 The multiple forms of bovine seminal ribonuclease: Structure and stability of a C-terminal swapped dimer. Febs Lett., 587, 2013
5OBE	X-ray structure of the adduct formed upon reaction of ribonuclease A with the compound fac-[RuII(CO)3Cl2(N3-MBI), MBI=methyl-benzimidazole 分子名称: PHOSPHATE ION, Ribonuclease pancreatic, pentakis(oxidaniumyl)-(oxidaniumylidynemethyl)ruthenium, ... 著者 Pontillo, N, Ferraro, G, Merlino, A. 登録日 2017-06-26 公開日 2017-07-26 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Ru-Based CO releasing molecules with azole ligands: interaction with proteins and the CO release mechanism disclosed by X-ray crystallography. Dalton Trans, 46, 2017
4OXF	Structure of ECP in complex with citrate ions at 1.50 Angstroms 分子名称: CITRIC ACID, Eosinophil cationic protein, FE (III) ION 著者 Blanco, J.A, Boix, E, Moussaoui, M, Salazar, V.A. 登録日 2014-02-05 公開日 2015-03-04 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structure of ECP in complex with citrate ions at 1.50 Angstroms To be published
5ARL	crystal structure of porcine RNase 4 D80A mutant in complex with dCMP 分子名称: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, RIBONUCLEASE 4 著者 Liang, S, Acharya, K.R. 登録日 2015-09-25 公開日 2016-01-20 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.61 Å) 主引用文献 Structural Basis of Substrate Specificity in Porcine Rnase 4. FEBS J., 283, 2016
3DJO	Bovine Seminal Ribonuclease uridine 2' phosphate complex 分子名称: ACETATE ION, PHOSPHORIC ACID MONO-[2-(2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-4-HYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-YL] ESTER, Seminal ribonuclease 著者 Dossi, K, Leonidas, D.D, Zographos, S.E, Oikonomakos, N.G. 登録日 2008-06-24 公開日 2009-06-30 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Mapping the ribonucleolytic active site of bovine seminal ribonuclease. The binding of pyrimidinyl phosphonucleotide inhibitors Eur.J.Med.Chem., 44, 2009
3DH6	Crystal structure of bovine pancreatic ribonuclease A variant (V47A) 分子名称: CHLORIDE ION, Ribonuclease pancreatic, SULFATE ION 著者 Kurpiewska, K, Font, J, Ribo, M, Vilanova, M, Lewinski, K. 登録日 2008-06-17 公開日 2008-07-15 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 X-ray crystallographic studies of RNase A variants engineered at the most destabilizing positions of the main hydrophobic core: further insight into protein stability Proteins, 77, 2009
3D8Y	RNase A- 5'-Deoxy-5'-N-piperidinothymidine complex 分子名称: 5'-deoxy-5'-piperidin-1-ylthymidine, CITRATE ANION, Ribonuclease pancreatic 著者 Leonidas, D.D, Zographos, S.E, Oikonomakos, N.G. 登録日 2008-05-26 公開日 2009-02-10 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 Morpholino, piperidino, and pyrrolidino derivatives of pyrimidine nucleosides as inhibitors of ribonuclease A: synthesis, biochemical, and crystallographic evaluation J.Med.Chem., 52, 2009

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