PDB: 82203 件ウェブページステータス検索Chemie searchBIRD

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6TSU	Capsid of empty GTA particle computed with C5 symmetry 分子名称: Major capsid protein Rcc01687, Uncharacterized protein 著者 Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. 登録日 2019-12-21 公開日 2020-07-22 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.42 Å) 主引用文献 Structure and mechanism of DNA delivery of a gene transfer agent. Nat Commun, 11, 2020
4J21	Tankyrase 2 in complex with 7-(4-amino-2-chlorophenyl)-4-methylquinolin-2(1H)-one 分子名称: 7-(4-amino-2-chlorophenyl)-4-methylquinolin-2(1H)-one, SULFATE ION, Tankyrase-2, ... 著者 Jansson, A.E, Larsson, E.A, Nordlund, P.L. 登録日 2013-02-04 公開日 2013-06-26 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Fragment-based ligand design of novel potent inhibitors of tankyrases. J.Med.Chem., 56, 2013
5OC7	Crystal structure of the pleckstrin-homology domain of Bcr-Abl in complex with monobody Mb(Bcr-PH_4). 分子名称: Breakpoint cluster region protein,pleckstrin-homology domain of Bcr-Abl, D-MYO-INOSITOL-4,5-BISPHOSPHATE, GLYCEROL, ... 著者 Reckel, S, Reynaud, A, Pojer, F, Hantschel, O. 登録日 2017-06-29 公開日 2017-12-27 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.652 Å) 主引用文献 Structural and functional dissection of the DH and PH domains of oncogenic Bcr-Abl tyrosine kinase. Nat Commun, 8, 2017
6BYD	Crystal structure of the second StART domain of yeast Lam4 分子名称: Membrane-anchored lipid-binding protein LAM4 著者 Jentsch, J.A, Kiburu, I.N, Wu, J, Pandey, K, Boudker, O, Menon, A.K. 登録日 2017-12-20 公開日 2018-01-31 最終更新日 2020-01-08 実験手法 X-RAY DIFFRACTION (2.195 Å) 主引用文献 Structural basis of sterol binding and transport by a yeast StARkin domain. J. Biol. Chem., 293, 2018
2KJB	Solution structure of CzrA in the DNA bound state 分子名称: CzrA protein 著者 Arunkumar, A.I, Campanello, G.C, Giedroc, D.P. 登録日 2009-05-27 公開日 2009-11-10 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of a paradigm ArsR family zinc sensor in the DNA-bound state Proc.Natl.Acad.Sci.USA, 106, 2009
6C5V	An anti-gH/gL antibody that neutralizes dual-tropic infection defines a site of vulnerability on Epstein-Barr virus 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody Fab AMMO1 heavy chain, Antibody Fab AMMO1 light chain, ... 著者 Snijder, J, Ortego, M.S, Weidle, C, Stuart, A.B, Gray, M.A, McElrath, M.J, Pancera, M, Veesler, D, McGuire, A.T, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2018-01-16 公開日 2018-05-02 最終更新日 2020-07-29 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 An Antibody Targeting the Fusion Machinery Neutralizes Dual-Tropic Infection and Defines a Site of Vulnerability on Epstein-Barr Virus. Immunity, 48, 2018
2CG5	Structure of aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase in complex with cytosolic acyl carrier protein and coenzyme A 分子名称: COENZYME A, FATTY ACID SYNTHASE, L-AMINOADIPATE-SEMIALDEHYDE DEHYDROGENASE-PHOSPHOPANTETHEINYL TRANSFERASE, ... 著者 Bunkoczi, G, Joshi, A, Papagrigoriu, E, Arrowsmith, C, Edwards, A, Sundstrom, M, Weigelt, J, von Delft, F, Smith, S, Oppermann, U. 登録日 2006-02-27 公開日 2006-03-01 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Mechanism and Substrate Recognition of Human Holo Acp Synthase. Chem.Biol., 14, 2007
2J6V	Crystal structure of the DNA repair enzyme UV Damage Endonuclease 分子名称: MANGANESE (II) ION, PHOSPHATE ION, UV ENDONUCLEASE 著者 Paspaleva, K, Thomassen, E.A.J, Pannu, N.S, Goossen, N, Abrahams, J.P. 登録日 2006-10-04 公開日 2007-10-16 最終更新日 2017-06-28 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Crystal Structure of the DNA Repair Enzyme Ultraviolet Damage Endonuclease. Structure, 15, 2007
3SK0	structure of Rhodococcus rhodochrous haloalkane dehalogenase DhaA mutant DhaA12 分子名称: CHLORIDE ION, Haloalkane dehalogenase 著者 Lahoda, M, Stsiapanava, A, Mesters, J, Koudelakova, T, Damborsky, J, Kuta-Smatanova, I. 登録日 2011-06-22 公開日 2012-06-27 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Dynamics and hydration explain failed functional transformation in dehalogenase design. Nat.Chem.Biol., 10, 2014
3SKF	Crystal structure of beta-site app-cleaving enzyme 1 (BACE-WT) complex with (2S)-2-((3S)-3-(acetylamino)-3-(butan-2-yl)-2-oxopyrrolidin-1-yl)-N-((2S,3R)-3-hydroxy-4-((3-methoxybenzyl)amino)-1-phenylbutan-2-yl)-4-phenylbutanamide 分子名称: (2S)-2-{(3S)-3-(acetylamino)-3-[(2S)-butan-2-yl]-2-oxopyrrolidin-1-yl}-N-{(2S,3R)-3-hydroxy-4-[(3-methoxybenzyl)amino]-1-phenylbutan-2-yl}-4-phenylbutanamide, Beta-secretase 1, IODIDE ION 著者 Muckelbauer, J.K. 登録日 2011-06-22 公開日 2011-08-31 最終更新日 2011-11-02 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Synthesis and in vivo evaluation of cyclic diaminopropane BACE-1 inhibitors. Bioorg.Med.Chem.Lett., 21, 2011
7BNB	Notum fragment_50 (3-(quinazolin-4-ylsulfanyl)propanoic acid) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(quinazolin-4-ylsulfanyl)propanoic acid, DIMETHYL SULFOXIDE, ... 著者 Zhao, Y, Jones, E.Y. 登録日 2021-01-21 公開日 2022-03-02 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.16 Å) 主引用文献 Notum Inhibitor To Be Published
2IJ0	Structural basis of T cell specificity and activation by the bacterial superantigen toxic shock syndrome toxin-1 分子名称: Toxic shock syndrome toxin-1, penultimate affinity-matured variant of hVbeta 2.1, D10 著者 Moza, B, Varma, A.K, Buonpane, R.A, Zhu, P, Herfst, C.A, Nicholson, M.J, Wilbuer, A.K, Nulifer, S, Wucherpfenning, K.W, McCormick, J.K, Kranz, D.M, Sundberg, E.J. 登録日 2006-09-28 公開日 2007-02-20 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structural basis of T-cell specificity and activation by the bacterial superantigen TSST-1. Embo J., 26, 2007
6TK2	Femtosecond to millisecond structural changes in a light-driven sodium pump: 1ms structure of KR2 with extrapolated, light and dark datasets 分子名称: EICOSANE, RETINAL, SODIUM ION, ... 著者 Skopintsev, P, Ehrenberg, D, Weinert, T, James, D, Kar, R, Johnson, P, Ozerov, D, Furrer, A, Martiel, I, Dworkowski, F, Nass, K, Knopp, G, Cirelli, C, Gashi, D, Mous, S, Wranik, M, Gruhl, T, Kekilli, D, Bruenle, S, Deupi, X, Schertler, G.F.X, Benoit, R, Panneels, V, Nogly, P, Schapiro, I, Milne, C, Heberle, J, Standfuss, J. 登録日 2019-11-28 公開日 2020-05-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Femtosecond-to-millisecond structural changes in a light-driven sodium pump. Nature, 583, 2020
6TE9	Neck of native GTA particle computed with C6 symmetry 分子名称: Adaptor protein Rcc01688, Phage major tail protein, TP901-1 family, ... 著者 Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. 登録日 2019-11-11 公開日 2020-07-22 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.58 Å) 主引用文献 Structure and mechanism of DNA delivery of a gene transfer agent. Nat Commun, 11, 2020
3NJ6	0.95 A resolution X-ray structure of (GGCAGCAGCC)2 分子名称: 5'-R(*GP*GP*CP*AP*GP*CP*AP*GP*CP*C)-3', SULFATE ION 著者 Kiliszek, A, Kierzek, R, Krzyzosiak, W.J, Rypniewski, W. 登録日 2010-06-17 公開日 2010-08-25 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (0.95 Å) 主引用文献 Atomic resolution structure of CAG RNA repeats: structural insights and implications for the trinucleotide repeat expansion diseases. Nucleic Acids Res., 38, 2010
6TK7	Femtosecond to millisecond structural changes in a light-driven sodium pump: Dark structure in acidic conditions 分子名称: EICOSANE, RETINAL, Sodium pumping rhodopsin 著者 Skopintsev, P, Ehrenberg, D, Weinert, T, James, D, Kar, R, Johnson, P, Ozerov, D, Furrer, A, Martiel, I, Dworkowski, F, Nass, K, Knopp, G, Cirelli, C, Gashi, D, Mous, S, Wranik, M, Gruhl, T, Kekilli, D, Bruenle, S, Deupi, X, Schertler, G.F.X, Benoit, R, Panneels, V, Nogly, P, Schapiro, I, Milne, C, Heberle, J, Standfuss, J. 登録日 2019-11-28 公開日 2020-05-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Femtosecond-to-millisecond structural changes in a light-driven sodium pump. Nature, 583, 2020
6TE8	Neck of native GTA particle computed with C12 symmetry 分子名称: Adaptor protein Rcc01688, Phage portal protein, HK97 family 著者 Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. 登録日 2019-11-11 公開日 2020-07-22 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.32 Å) 主引用文献 Structure and mechanism of DNA delivery of a gene transfer agent. Nat Commun, 11, 2020
6TEB	Tail-baseplate interface of native GTA particle computed with C6 symmetry 分子名称: Distal tail protein Rcc01695, Tail tube protein Rcc01691 著者 Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. 登録日 2019-11-11 公開日 2020-07-22 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4.14 Å) 主引用文献 Structure and mechanism of DNA delivery of a gene transfer agent. Nat Commun, 11, 2020
6TK1	Femtosecond to millisecond structural changes in a light-driven sodium pump: 20ms structure of KR2 with extrapolated, light and dark datasets 分子名称: EICOSANE, RETINAL, SODIUM ION, ... 著者 Skopintsev, P, Ehrenberg, D, Weinert, T, James, D, Kar, R, Johnson, P, Ozerov, D, Furrer, A, Martiel, I, Dworkowski, F, Nass, K, Knopp, G, Cirelli, C, Gashi, D, Mous, S, Wranik, M, Gruhl, T, Kekilli, D, Bruenle, S, Deupi, X, Schertler, G.F.X, Benoit, R, Panneels, V, Nogly, P, Schapiro, I, Milne, C, Heberle, J, Standfuss, J. 登録日 2019-11-28 公開日 2020-05-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Femtosecond-to-millisecond structural changes in a light-driven sodium pump. Nature, 583, 2020
4JJO	crystal structure of apo-clavibacter Michiganensis expansin 分子名称: cellulose binding protein 著者 Yennawar, N.H, Yennawar, H.P, Georgelis, N, Cosgrove, D.J. 登録日 2013-03-08 公開日 2014-03-26 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Crystal structure of wild type and D78N mutant clavibacter Michiganensis expansin, in apo form and in complex with oligosaccharides To be Published
6TOA	Neck of empty GTA particle computed with C6 symmetry 分子名称: Adaptor protein Rcc01688, Portal protein Rcc01684, Stopper protein Rcc01689, ... 著者 Bardy, P, Fuzik, T, Hrebik, D, Pantucek, R, Beatty, J.T, Plevka, P. 登録日 2019-12-11 公開日 2020-07-22 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.47 Å) 主引用文献 Structure and mechanism of DNA delivery of a gene transfer agent. Nat Commun, 11, 2020
3NJ7	1.9 A resolution X-ray structure of (GGCAGCAGCC)2 分子名称: 5'-R(*GP*GP*CP*AP*GP*CP*AP*GP*CP*C)-3', SULFATE ION 著者 Kiliszek, A, Kierzek, R, Krzyzosiak, W.J, Rypniewski, W. 登録日 2010-06-17 公開日 2010-08-25 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.904 Å) 主引用文献 Atomic resolution structure of CAG RNA repeats: structural insights and implications for the trinucleotide repeat expansion diseases. Nucleic Acids Res., 38, 2010
6TK5	Femtosecond to millisecond structural changes in a light-driven sodium pump: 800fs+2ps structure of KR2 with extrapolated, light and dark datasets 分子名称: EICOSANE, RETINAL, Sodium pumping rhodopsin 著者 Skopintsev, P, Ehrenberg, D, Weinert, T, James, D, Kar, R, Johnson, P, Ozerov, D, Furrer, A, Martiel, I, Dworkowski, F, Nass, K, Knopp, G, Cirelli, C, Gashi, D, Mous, S, Wranik, M, Gruhl, T, Kekilli, D, Bruenle, S, Deupi, X, Schertler, G.F.X, Benoit, R, Panneels, V, Nogly, P, Schapiro, I, Milne, C, Heberle, J, Standfuss, J. 登録日 2019-11-28 公開日 2020-05-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Femtosecond-to-millisecond structural changes in a light-driven sodium pump. Nature, 583, 2020
2JVA	NMR solution structure of peptidyl-tRNA hydrolase domain protein from Pseudomonas syringae pv. tomato. Northeast Structural Genomics Consortium target PsR211 分子名称: Peptidyl-tRNA hydrolase domain protein 著者 Singarapu, K.K, Sukumaran, D, Parish, D, Eletsky, A, Zhang, Q, Zhao, L, Jiang, M, Maglaqui, M, Xiao, R, Liu, J, Baran, M.C, Swapna, G.V.T, Huang, Y.J, Acton, T.B, Rost, B, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG) 登録日 2007-09-14 公開日 2007-10-02 最終更新日 2024-05-08 実験手法 SOLUTION NMR 主引用文献 NMR structure of the peptidyl-tRNA hydrolase domain from Pseudomonas syringae expands the structural coverage of the hydrolysis domains of class 1 peptide chain release factors. Proteins, 71, 2008
2JJJ	Endothiapepsin in complex with a gem-diol inhibitor. 分子名称: ENDOTHIAPEPSIN, N~2~-[(2R)-2-benzyl-3-(tert-butylsulfonyl)propanoyl]-N-{(1R)-1-(cyclohexylmethyl)-3,3-difluoro-2,2-dihydroxy-4-[(2-morpholin-4-ylethyl)amino]-4-oxobutyl}-3-(1H-imidazol-3-ium-4-yl)-L-alaninamide, SULFATE ION 著者 Coates, L, Tuan, H.-F, Tomanicek, S.J, Kovalevsky, A, Mustyakimov, M, Erskine, P, Cooper, J. 登録日 2008-04-09 公開日 2008-05-27 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1 Å) 主引用文献 The Catalytic Mechanism of an Aspartic Proteinase Explored with Neutron and X-Ray Diffraction J.Am.Chem.Soc., 130, 2008

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