PDB: 183283 件ウェブページステータス検索Chemie searchBIRD

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6QHQ	Time resolved structural analysis of the full turnover of an enzyme - 1128 ms 分子名称: Fluoroacetate dehalogenase, fluoroacetic acid 著者 Schulz, E.C, Mehrabi, P, Pai, E.F, Miller, D. 登録日 2019-01-17 公開日 2019-09-25 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.735 Å) 主引用文献 Time-resolved crystallography reveals allosteric communication aligned with molecular breathing. Science, 365, 2019
6QHW	Time resolved structural analysis of the full turnover of an enzyme - 4512 ms 分子名称: Fluoroacetate dehalogenase, GLYCOLIC ACID, fluoroacetic acid 著者 Schulz, E.C, Mehrabi, P, Pai, E.F, Miller, D. 登録日 2019-01-17 公開日 2019-09-25 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.718 Å) 主引用文献 Time-resolved crystallography reveals allosteric communication aligned with molecular breathing. Science, 365, 2019
7ZVQ	Crystal structure of the carotenoid-binding protein domain from silkworm Bombyx mori (BmCBP) in the apoform, S206V mutant 分子名称: Carotenoid-binding protein 著者 Sluchanko, N.N, Boyko, K.M, Varfolomeeva, L.A, Slonimskiy, Y.B, Egorkin, N.A, Maksimov, E.G, Popov, V.O. 登録日 2022-05-17 公開日 2022-10-26 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis for the carotenoid binding and transport function of a START domain. Structure, 30, 2022
7R7B	1.50 Angstroem Crystal Structure of FeoA from Bacteroides fragilis 分子名称: Ferrous iron transport protein B, GLYCEROL, PHOSPHATE ION 著者 Sestok, A.E, Smith, A.T. 登録日 2021-06-24 公開日 2022-04-27 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 A fusion of the Bacteroides fragilis ferrous iron import proteins reveals a role for FeoA in stabilizing GTP-bound FeoB. J.Biol.Chem., 298, 2022
5M8D	Tubulin MTD265-R1 complex 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5-(6-morpholin-4-yl-2-pyrrolidin-1-yl-pyrimidin-4-yl)-4-(trifluoromethyl)pyridin-2-amine, CALCIUM ION, ... 著者 Bohnacker, T, Prota, A.E, Steinmetz, M.O, Wymann, M.P. 登録日 2016-10-28 公開日 2017-03-22 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Deconvolution of Buparlisib's mechanism of action defines specific PI3K and tubulin inhibitors for therapeutic intervention. Nat Commun, 8, 2017
6QHY	Time resolved structural analysis of the full turnover of an enzyme - 100 ms 分子名称: Fluoroacetate dehalogenase, fluoroacetic acid 著者 Schulz, E.C, Mehrabi, P, Pai, E.F, Miller, D. 登録日 2019-01-17 公開日 2019-09-25 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.698 Å) 主引用文献 Time-resolved crystallography reveals allosteric communication aligned with molecular breathing. Science, 365, 2019
8G3G	CryoEM structure of yeast recombination mediator Rad52 分子名称: DNA repair and recombination protein RAD52 著者 Deveryshetty, J, Basore, K, Rau, M, Fitzpatrick, J.A.J, Antony, E. 登録日 2023-02-07 公開日 2023-11-15 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Yeast Rad52 is a homodecamer and possesses BRCA2-like bipartite Rad51 binding modes. Nat Commun, 14, 2023
8A8N	Structure of self-assembling engineered protein nanocage (EPN) fused with hepatitis A pX protein 分子名称: EPN-pX 著者 Duyvesteyn, H.M.E, Stuart, D.I. 登録日 2022-06-23 公開日 2022-08-10 最終更新日 2022-08-31 実験手法 ELECTRON MICROSCOPY (6.7 Å) 主引用文献 Nonlytic cellular release of hepatitis A virus requires dual capsid recruitment of the ESCRT-associated Bro1 domain proteins HD-PTP and ALIX. Plos Pathog., 18, 2022
5MAG	Crystal structure of MELK in complex with an inhibitor 分子名称: DIMETHYL SULFOXIDE, GLYCEROL, Maternal embryonic leucine zipper kinase, ... 著者 Canevari, G, Re Depaolini, S, Casale, E, Felder, E, Kuster, B, Heinzlmeir, S. 登録日 2016-11-03 公開日 2017-12-06 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 The target landscape of clinical kinase drugs. Science, 358, 2017
6BPG	Crystal structure of betaine aldehyde dehydrogenase from Pseudomonas aeruginosa with bound rubidium ions 分子名称: NAD/NADP-dependent betaine aldehyde dehydrogenase, RUBIDIUM ION 著者 Lopez-Orduna, E.F, Munoz-Clares, R.A, Gonzalez-Segura, L. 登録日 2017-11-23 公開日 2018-11-28 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.086 Å) 主引用文献 Crystallographic identification of monovalent cation-binding sites in two betaine aldehyde dehydrogenases To Be Published
6NEM	3-hydroxy-5-[(naphthalen-1-yl)methyl]-6-[4-(1H-tetrazol-5-yl)phenyl]pyridin-2(1H)-one bound to influenza 2009 pH1N1 endonuclease 分子名称: 3-hydroxy-5-[(naphthalen-1-yl)methyl]-6-[4-(1H-tetrazol-5-yl)phenyl]pyridin-2(1H)-one, MANGANESE (II) ION, Polymerase acidic protein, ... 著者 Bauman, J.D, Arnold, E. 登録日 2018-12-17 公開日 2019-05-01 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Aryl and Arylalkyl Substituted 3-Hydroxypyridin-2(1H)-ones: Synthesis and Evaluation as Inhibitors of Influenza A Endonuclease. Chemmedchem, 14, 2019
6FSX	The hit-and-return system enables efficient time-resolved serial synchrotron crystallography 分子名称: Fluoroacetate dehalogenase 著者 Schulz, E.C, Mehrabi, P, Mueller-werkmeiser, H, Tellkamp, F, Jha, A, Stuart, W, Persch, E, De Gasparo, R, Diederich, F, Pai, E, Miller, D. 登録日 2018-02-20 公開日 2018-10-24 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 The hit-and-return system enables efficient time-resolved serial synchrotron crystallography. Nat. Methods, 15, 2018
7ZQ6	70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain 分子名称: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Mitropoulou, A, Wlodarski, T, Ahn, M, Becker, T.A, Beckmann, R, Cabrita, L.D, Christodoulou, J. 登録日 2022-04-29 公開日 2022-08-10 実験手法 ELECTRON MICROSCOPY (2.75 Å) 主引用文献 Modulating co-translational protein folding by rational design and ribosome engineering. Nat Commun, 13, 2022
7T3P	IP3 and ATP bound type 3 IP3 receptor in the pre-active A state 分子名称: ADENOSINE-5'-TRIPHOSPHATE, D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Inositol 1,4,5-trisphosphate receptor type 3, ... 著者 Schmitz, E.A, Takahashi, H, Karakas, E. 登録日 2021-12-08 公開日 2022-03-23 最終更新日 2022-05-04 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural basis for activation and gating of IP 3 receptors. Nat Commun, 13, 2022
6QI3	Time resolved structural analysis of the full turnover of an enzyme - 27072 ms 分子名称: Fluoroacetate dehalogenase, GLYCOLIC ACID 著者 Schulz, E.C, Mehrabi, P, Pai, E.F, Miller, D. 登録日 2019-01-17 公開日 2019-09-25 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.739 Å) 主引用文献 Time-resolved crystallography reveals allosteric communication aligned with molecular breathing. Science, 365, 2019
6QIN	CRYSTAL STRUCTURE OF THE PMGL2 ESTERASE FROM PERMAFROST METAGENOMIC LIBRARY 分子名称: CHLORIDE ION, MAGNESIUM ION, PMGL2 著者 Boyko, K.M, Nikolaeva, A.Y, Korzhenevskiy, D.A, Kryukova, M.V, Petrovskaya, L.E, Novototskaya-Vlasova, K.A, Rivkina, E.M, Dolgikh, D.A, Kirpichnikov, M.P, Popov, V.O. 登録日 2019-01-21 公開日 2019-12-25 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structure of PMGL2 esterase from the hormone-sensitive lipase family with GCSAG motif around the catalytic serine. Plos One, 15, 2020
7UVL	IgA1 Protease with IgA1 substrate 分子名称: Immunoglobulin alpha-1 heavy chain, Immunoglobulin alpha-1 heavy constant, Immunoglobulin alpha-1 light chain, ... 著者 Eisenmesser, Z.E, Zheng, H. 登録日 2022-05-02 公開日 2022-11-23 実験手法 ELECTRON MICROSCOPY (3.56 Å) 主引用文献 A substrate-induced gating mechanism is conserved among Gram-positive IgA1 metalloproteases. Commun Biol, 5, 2022
6QHS	Time resolved structural analysis of the full turnover of an enzyme - 564 ms 分子名称: Fluoroacetate dehalogenase, fluoroacetic acid 著者 Schulz, E.C, Mehrabi, P, Pai, E.F, Miller, D. 登録日 2019-01-17 公開日 2019-09-25 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.733 Å) 主引用文献 Time-resolved crystallography reveals allosteric communication aligned with molecular breathing. Science, 365, 2019
6WU9	50S subunit of 70S Ribosome Enterococcus faecalis MultiBody refinement 分子名称: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Jogl, G, Khayat, R. 登録日 2020-05-04 公開日 2020-11-04 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Cryo-electron microscopy structure of the 70S ribosome from Enterococcus faecalis. Sci Rep, 10, 2020
6QI0	Time resolved structural analysis of the full turnover of an enzyme - 9024 ms 分子名称: CALCIUM ION, Fluoroacetate dehalogenase, GLYCOLIC ACID, ... 著者 Schulz, E.C, Mehrabi, P, Pai, E.F, Miller, D. 登録日 2019-01-17 公開日 2019-09-25 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.733 Å) 主引用文献 Time-resolved crystallography reveals allosteric communication aligned with molecular breathing. Science, 365, 2019
1GQT	Activation of Ribokinase by Monovalent Cations 分子名称: CESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, RIBOKINASE, ... 著者 Andersson, C.E, Mowbray, S.L. 登録日 2001-12-05 公開日 2002-01-28 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Activation of Ribokinase by Monovalent Cations. J.Mol.Biol., 315, 2002
6QJR	Crystal structure of a DNA dodecamer containing a tetramethylpyrrolinoxyl (nitroxide) spin label 分子名称: DNA (5'-D(*CP*GP*CP*AP*AP*AP*AP*AP*AP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*TP*TP*TP*TP*TP*(5NO)P*GP*CP*G)-3') 著者 Hardwick, J.S, Haugland, M.M, Ptchelkine, D, Brown, T, Anderson, E.E. 登録日 2019-01-24 公開日 2020-02-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 2'-Alkynyl spin-labelling is a minimally perturbing tool for DNA structural analysis. Nucleic Acids Res., 48, 2020
6QHV	Time resolved structural analysis of the full turnover of an enzyme - 100 ms 分子名称: Fluoroacetate dehalogenase, fluoroacetic acid 著者 Schulz, E.C, Mehrabi, P, Pai, E.F, Miller, D. 登録日 2019-01-17 公開日 2019-09-25 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.715 Å) 主引用文献 Time-resolved crystallography reveals allosteric communication aligned with molecular breathing. Science, 365, 2019
6O1D	Cryo-EM structure of the centromeric nucleosome with native alpha satellite DNA 分子名称: DNA (145-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ... 著者 Zhou, B.-R. 登録日 2019-02-19 公開日 2019-05-22 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.395 Å) 主引用文献 Atomic resolution cryo-EM structure of a native-like CENP-A nucleosome aided by an antibody fragment. Nat Commun, 10, 2019
6QLA	CRYSTAL STRUCTURE OF THE PMGL2 ESTERASE (point mutant 1) FROM PERMAFROST METAGENOMIC LIBRARY 分子名称: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, CHLORIDE ION, MAGNESIUM ION, ... 著者 Boyko, K.M, Garsia, D, Nikolaeva, A.Y, Korzhenevskiy, D.A, Kryukova, M.V, Petrovskaya, L.E, Novototskaya-Vlasova, K.A, Rivkina, E.M, Dolgikh, D.A, Kirpichnikov, M.P, Popov, V.O. 登録日 2019-01-31 公開日 2019-12-25 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.43 Å) 主引用文献 Crystal structure of PMGL2 esterase from the hormone-sensitive lipase family with GCSAG motif around the catalytic serine. Plos One, 15, 2020

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