Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2RHP
DownloadVisualize
BU of 2rhp by Molmil
The Thrombospondin-1 Polymorphism Asn700Ser Associated with Cornoary Artery Disease Causes Local and Long-Ranging Changes in Protein Structure
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Carlson, C.B, Keck, J.L, Mosher, D.F.
登録日2007-10-09
公開日2008-05-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Influences of the N700S Thrombospondin-1 Polymorphism on Protein Structure and Stability.
J.Biol.Chem., 283, 2008
1IL9
DownloadVisualize
BU of 1il9 by Molmil
STRUCTURE OF RICIN A CHAIN BOUND WITH INHIBITOR 8-METHYL-9-OXOGUANINE
分子名称: 5-AMINO-2-METHYL-6H-OXAZOLO[5,4-D]PYRIMIDIN-7-ONE, RICIN A CHAIN
著者Miller, D.J, Ravikumar, K, Shen, H, Suh, J.-K, Kerwin, S.M, Robertus, J.D.
登録日2001-05-07
公開日2002-01-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure-based design and characterization of novel platforms for ricin and shiga toxin inhibition.
J.Med.Chem., 45, 2002
4DD3
DownloadVisualize
BU of 4dd3 by Molmil
EVAL processed HEWL, carboplatin aqueous paratone
分子名称: 2-methylprop-1-ene, CHLORIDE ION, Lysozyme C
著者Tanley, S.W, Schreurs, A.M, Kroon-Batenburg, L.M, Meredith, J, Prendergast, R, Walsh, D, Bryant, P, Levy, C, Helliwell, J.R.
登録日2012-01-18
公開日2012-04-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural studies of the effect that dimethyl sulfoxide (DMSO) has on cisplatin and carboplatin binding to histidine in a protein.
Acta Crystallogr.,Sect.D, 68, 2012
8QST
DownloadVisualize
BU of 8qst by Molmil
Cryo-EM structure of the glucose-specific PTS transporter IICB from E. coli in the inward- and outward-facing conformation
分子名称: PTS system glucose-specific EIICB component, beta-D-glucopyranose
著者Roth, P, Fotiadis, D, Jeckelmann, J.-M.
登録日2023-10-11
公開日2024-09-25
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献Cryo-EM structure of the glucose-specific PTS transporter IICB from E. coli in the inward-open state
To Be Published
8QSR
DownloadVisualize
BU of 8qsr by Molmil
Cryo-EM structure of the glucose-specific PTS transporter IICB from E. coli in the inward-facing conformation
分子名称: PTS system glucose-specific EIICB component, beta-D-glucopyranose
著者Roth, P, Fotiadis, D, Jeckelmann, J.-M.
登録日2023-10-11
公開日2024-09-25
実験手法ELECTRON MICROSCOPY (2.56 Å)
主引用文献Cryo-EM structure of the glucose-specific PTS transporter IICB from E. coli in the inward-open state
To Be Published
1IFX
DownloadVisualize
BU of 1ifx by Molmil
CRYSTAL STRUCTURE OF NH3-DEPENDENT NAD+ SYNTHETASE FROM BACILLUS SUBTILIS COMPLEXED WITH TWO MOLECULES DEAMIDO-NAD
分子名称: NH(3)-DEPENDENT NAD(+) SYNTHETASE, NICOTINIC ACID ADENINE DINUCLEOTIDE
著者Devedjiev, Y, Symersky, J, Singh, R, Brouillette, W, Muccio, D, Jedrzejas, M, Brouillette, C, DeLucas, L.
登録日2001-04-13
公開日2001-06-06
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Stabilization of active-site loops in NH3-dependent NAD+ synthetase from Bacillus subtilis.
Acta Crystallogr.,Sect.D, 57, 2001
2YQ2
DownloadVisualize
BU of 2yq2 by Molmil
Structure of BVDV1 envelope glycoprotein E2, pH8
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, BVDV1 E2
著者El Omari, K, Iourin, O, Harlos, K, Grimes, J.M, Stuart, D.I.
登録日2012-11-04
公開日2013-01-16
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Structure of a Pestivirus Envelope Glycoprotein E2 Clarifies its Role in Cell Entry.
Cell Rep., 3, 2013
4LQV
DownloadVisualize
BU of 4lqv by Molmil
Thrirty minutes iron loaded frog M ferritin
分子名称: CHLORIDE ION, FE (II) ION, Ferritin, ...
著者Mangani, S, Di Pisa, F, Pozzi, C, Turano, P, Lalli, D.
登録日2013-07-19
公開日2014-07-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Time-lapse anomalous X-ray diffraction shows how Fe(2+) substrate ions move through ferritin protein nanocages to oxidoreductase sites.
Acta Crystallogr.,Sect.D, 71, 2015
4LQJ
DownloadVisualize
BU of 4lqj by Molmil
Two minutes iron loaded frog M ferritin
分子名称: CHLORIDE ION, FE (II) ION, Ferritin, ...
著者Mangani, S, Di Pisa, F, Pozzi, C, Turano, P, Lalli, D.
登録日2013-07-18
公開日2014-09-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Time-lapse anomalous X-ray diffraction shows how Fe(2+) substrate ions move through ferritin protein nanocages to oxidoreductase sites.
Acta Crystallogr.,Sect.D, 71, 2015
1PD8
DownloadVisualize
BU of 1pd8 by Molmil
Analysis of Three Crystal Structure Determinations of a 5-Methyl-6-N-Methylanilino Pyridopyrimidine Antifolate Complex with Human Dihydrofolate Reductase
分子名称: 2,4-DIAMINO-5-METHYL-6-[(3,4,5-TRIMETHOXY-N-METHYLANILINO)METHYL]PYRIDO[2,3-D]PYRIMIDINE, Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Cody, V, Luft, J.R, Pangborn, W, Gangjee, A.
登録日2003-05-19
公開日2003-12-09
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Analysis of three crystal structure determinations of a 5-methyl-6-N-methylanilino pyridopyrimidine antifolate complex with human dihydrofolate reductase.
Acta Crystallogr.,Sect.D, 59, 2003
5OVZ
DownloadVisualize
BU of 5ovz by Molmil
High resolution structure of the PBP NocT in complex with nopaline
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, N-[(1S)-4-carbamimidamido-1-carboxybutyl]-D-glutamic acid, ...
著者Vigouroux, A, Morera, S.
登録日2017-08-30
公開日2018-10-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Agrobacterium uses a unique ligand-binding mode for trapping opines and acquiring a competitive advantage in the niche construction on plant host.
Plos Pathog., 10, 2014
1JTL
DownloadVisualize
BU of 1jtl by Molmil
The crystal structure of d(GGCCAATTGG) Complexed with Distamycin
分子名称: 5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3', DISTAMYCIN A
著者Uytterhoeven, K, Van Meervelt, L.
登録日2001-08-21
公開日2002-08-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Two 1 : 1 binding modes for distamycin in the minor groove of d(GGCCAATTGG).
Eur.J.Biochem., 269, 2002
1PD9
DownloadVisualize
BU of 1pd9 by Molmil
Analysis of Three Crystal Structure Determinations of a 5-Methyl-6-N-Methylanilino Pyridopyrimidine antifolate Complex with Human Dihydrofolate Reductase
分子名称: 2,4-DIAMINO-5-METHYL-6-[(3,4,5-TRIMETHOXY-N-METHYLANILINO)METHYL]PYRIDO[2,3-D]PYRIMIDINE, Dihydrofolate reductase, SULFATE ION
著者Cody, V, Luft, J.R, Pangborn, W, Gangjee, A.
登録日2003-05-19
公開日2003-12-09
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Analysis of three crystal structure determinations of a 5-methyl-6-N-methylanilino pyridopyrimidine antifolate complex with human dihydrofolate reductase.
Acta Crystallogr.,Sect.D, 59, 2003
2YDQ
DownloadVisualize
BU of 2ydq by Molmil
CpOGA D298N in complex with hOGA-derived O-GlcNAc peptide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, BIFUNCTIONAL PROTEIN NCOAT, CADMIUM ION, ...
著者Schimpl, M, Borodkin, V.S, Gray, L.J, van Aalten, D.M.F.
登録日2011-03-24
公開日2012-03-14
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Synergy of Peptide and Sugar in O-Glcnacase Substrate Recognition.
Chem.Biol., 19, 2012
1PE9
DownloadVisualize
BU of 1pe9 by Molmil
MUTATIONS IN THE T1.5 LOOP OF PECTATE LYASE A
分子名称: Pectate lyase A
著者Dehdashti, S.J, Doan, C.N, Chao, K.L, Yoder, M.D.
登録日2003-05-21
公開日2004-03-16
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Effect of mutations in the T1.5 loop of pectate lyase A from Erwinia chrysanthemi EC16.
Acta Crystallogr.,Sect.D, 59, 2003
1TDR
DownloadVisualize
BU of 1tdr by Molmil
EXPRESSION, CHARACTERIZATION, AND CRYSTALLOGRAPHIC ANALYSIS OF TELLUROMETHIONYL DIHYDROFOLATE REDUCTASE
分子名称: CALCIUM ION, CHLORIDE ION, METHOTREXATE, ...
著者Lewinski, K, Lebioda, L.
登録日1995-04-13
公開日1995-07-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Expression, characterization and crystallographic analysis of telluromethionyl dihydrofolate reductase.
Acta Crystallogr.,Sect.D, 51, 1995
169D
DownloadVisualize
BU of 169d by Molmil
THE SOLUTION STRUCTURE OF THE R(GCG)D(TATACCC):D(GGGTATACGC) OKAZAKI FRAGMENT CONTAINS TWO DISTINCT DUPLEX MORPHOLOGIES CONNECTED BY A JUNCTION
分子名称: DNA (5'-D(*GP*GP*GP*TP*AP*TP*AP*CP*GP*C)-3'), DNA/RNA (5'-R(*GP*CP*G)-D(P*TP*AP*TP*AP*CP*CP*C)-3')
著者Salazar, M, Fedoroff, O.Y, Zhu, L, Reid, B.R.
登録日1994-04-11
公開日1994-07-31
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The solution structure of the r(gcg)d(TATACCC):d(GGGTATACGC) Okazaki fragment contains two distinct duplex morphologies connected by a junction.
J.Mol.Biol., 241, 1994
1PEY
DownloadVisualize
BU of 1pey by Molmil
Crystal structure of the Response Regulator Spo0F complexed with Mn2+
分子名称: MANGANESE (II) ION, Sporulation initiation phosphotransferase F
著者Mukhopadhyay, D, Sen, U, Zapf, J, Varughese, K.I.
登録日2003-05-22
公開日2004-05-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Metals in the sporulation phosphorelay: manganese binding by the response regulator Spo0F.
Acta Crystallogr.,Sect.D, 60, 2004
4HLI
DownloadVisualize
BU of 4hli by Molmil
DNA dodecamer containing 5-hydroxymethyl-cytosine
分子名称: DNA (5'-D(*CP*GP*(5HC)P*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION, POTASSIUM ION
著者Spingler, B, Renciuk, D, Vorlickova, M.
登録日2012-10-17
公開日2013-09-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Crystal structures of B-DNA dodecamer containing the epigenetic modifications 5-hydroxymethylcytosine or 5-methylcytosine.
Nucleic Acids Res., 41, 2013
3EF6
DownloadVisualize
BU of 3ef6 by Molmil
Crystal structure of Toluene 2,3-Dioxygenase Reductase
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, SULFATE ION, ...
著者Friemann, R, Lee, K, Brown, E.N, Gibson, D.T, Eklund, H, Ramaswamy, S.
登録日2008-09-08
公開日2009-03-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structures of the multicomponent Rieske non-heme iron toluene 2,3-dioxygenase enzyme system
Acta Crystallogr.,Sect.D, 65, 2009
4HHQ
DownloadVisualize
BU of 4hhq by Molmil
Serum paraoxonase-1 by directed evolution with the H115Q and H134Q mutations
分子名称: BROMIDE ION, CALCIUM ION, DODECYL-BETA-D-MALTOSIDE, ...
著者Moshe, B.-D, Grzegorz, W, Mikael, E, Israel, S, Joel, L.S, Dan, S.T.
登録日2012-10-10
公開日2013-03-27
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Catalytic metal ion rearrangements underline promiscuity and evolvability of a metalloenzyme.
J.Mol.Biol., 425, 2013
3V9D
DownloadVisualize
BU of 3v9d by Molmil
Crystal structure of the tetra-decanucleotide d(CCCCGGTACCGGGG)2 as an A-DNA duplex
分子名称: DNA (5'-D(*CP*CP*CP*CP*GP*GP*TP*AP*CP*CP*GP*GP*GP*G)-3'), MANGANESE (II) ION
著者Mandal, P.K, Venkadesh, S, Gautham, N.
登録日2011-12-26
公開日2012-04-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the tetradecanucleotide d(CCCCGGTACCGGGG)2 as an A-DNA duplex
Acta Crystallogr.,Sect.F, 68, 2012
4M65
DownloadVisualize
BU of 4m65 by Molmil
In situ thermolysin crystallized on a MiTeGen micromesh with asparagine ligand
分子名称: 1,2-ETHANEDIOL, ASPARAGINE, CALCIUM ION, ...
著者Yin, X, Scalia, A, Leroy, L, Cuttitta, C.M, Polizzo, G.M, Ericson, D.L, Roessler, C.G, Campos, O, Agarwal, R, Allaire, M, Orville, A.M, Jackimowicz, R, Ma, M.Y, Sweet, R.M, Soares, A.S.
登録日2013-08-08
公開日2013-10-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Hitting the target: fragment screening with acoustic in situ co-crystallization of proteins plus fragment libraries on pin-mounted data-collection micromeshes
Acta Crystallogr.,Sect.D, D70
199D
DownloadVisualize
BU of 199d by Molmil
Solution structure of the monoalkylated mitomycin c-DNA complex
分子名称: CARBAMIC ACID 2,6-DIAMINO-5-METHYL-4,7-DIOXO-2,3,4,7-TETRAHYDRO-1H-3A-AZA-CYCLOPENTA[A]INDEN-8-YLMETHYL ESTER, DNA (5'-D(*(DI)P*CP*AP*CP*GP*TP*CP*(DI)P*T)-3'), DNA (5'-D(*AP*CP*GP*AP*CP*GP*TP*GP*C)-3')
著者Sastry, M, Fiala, R, Lipman, R, Tomasz, M, Patel, D.J.
登録日1994-12-01
公開日1995-02-07
最終更新日2024-03-13
実験手法SOLUTION NMR
主引用文献Solution structure of the monoalkylated mitomycin C-DNA complex.
J.Mol.Biol., 247, 1995
4MKU
DownloadVisualize
BU of 4mku by Molmil
Frog M ferritin mutant H54Q
分子名称: CHLORIDE ION, Ferritin, middle subunit, ...
著者Mangani, S, Di Pisa, F, Pozzi, C, Turano, P, Lalli, D.
登録日2013-09-05
公開日2014-09-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Time-lapse anomalous X-ray diffraction shows how Fe(2+) substrate ions move through ferritin protein nanocages to oxidoreductase sites.
Acta Crystallogr.,Sect.D, 71, 2015

225399

件を2024-09-25に公開中

PDB statisticsPDBj update infoContact PDBjnumon