PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

---

7TKU	Structure of the yeast clamp loader (Replication Factor C RFC) bound to the open sliding clamp (Proliferating Cell Nuclear Antigen PCNA) 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... 著者 Gaubitz, C, Liu, X, Pajak, J, Stone, N, Hayes, J, Demo, G, Kelch, B.A. 登録日 2022-01-17 公開日 2022-02-16 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Cryo-EM structures reveal high-resolution mechanism of a DNA polymerase sliding clamp loader. Elife, 11, 2022
7THV	Structure of the yeast clamp loader (Replication Factor C RFC) bound to the sliding clamp (Proliferating Cell Nuclear Antigen PCNA) in an autoinhibited conformation 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... 著者 Gaubitz, C, Liu, X, Pajak, J, Stone, N, Hayes, J, Demo, G, Kelch, B.A. 登録日 2022-01-12 公開日 2022-02-16 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Cryo-EM structures reveal high-resolution mechanism of a DNA polymerase sliding clamp loader. Elife, 11, 2022
7THJ	Structure of the yeast clamp loader (Replication Factor C RFC) bound to the sliding clamp (Proliferating Cell Nuclear Antigen PCNA) in an autoinhibited conformation 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... 著者 Gaubitz, C, Liu, X, Pajak, J, Stone, N, Hayes, J, Demo, G, Kelch, B.A. 登録日 2022-01-11 公開日 2022-02-16 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Cryo-EM structures reveal high-resolution mechanism of a DNA polymerase sliding clamp loader. Elife, 11, 2022
9G7H	Human Sirt6 in complex with ADP-ribose and the inhibitor 2-Pr 分子名称: 2,4-bis(oxidanylidene)-1-[2-oxidanylidene-2-[[(2S)-3-oxidanylidene-3-(propylamino)-2-[3-(3-pyridin-3-yl-1,2,4-oxadiazol-5-yl)propanoylamino]propyl]amino]ethyl]pyrimidine-5-carboxamide, NAD-dependent protein deacetylase sirtuin-6, SULFATE ION, ... 著者 You, W, Steegborn, C. 登録日 2024-07-21 公開日 2024-08-14 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Elucidating the Unconventional Binding Mode of a DNA-Encoded Library Hit Provides a Blueprint for Sirtuin 6 Inhibitor Development. Chemmedchem, 2024
7DE9	crystal structure of Arabidopsis RDM15 tudor domain in complex with an H3K4me1 peptide 分子名称: Histone H3.2, Transcriptional regulator 著者 Song, Z, Du, J. 登録日 2020-11-03 公開日 2021-04-07 最終更新日 2021-06-23 実験手法 X-RAY DIFFRACTION (1.711 Å) 主引用文献 A histone H3K4me1-specific binding protein is required for siRNA accumulation and DNA methylation at a subset of loci targeted by RNA-directed DNA methylation. Nat Commun, 12, 2021
6MJ1	Crystal structure of RefZ (regulator of FtsZ) from Bacillus subtilis 分子名称: Probable HTH-type transcriptional regulator YttP 著者 Krieger, I.V, Brown, E.E, Herman, J.K, Sacchettini, J.C. 登録日 2018-09-20 公開日 2019-03-20 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 A DNA-Binding Protein Tunes Septum Placement during Bacillus subtilis Sporulation. J.Bacteriol., 201, 2019
5E24	Structure of the Su(H)-Hairless-DNA Repressor Complex 分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*CP*CP*AP*CP*AP*GP*T)-3'), DNA (5'-D(*TP*TP*AP*CP*TP*GP*TP*GP*GP*GP*AP*AP*AP*GP*A)-3'), ... 著者 Kovall, R.A, Yuan, Z. 登録日 2015-09-30 公開日 2016-06-15 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Structure and Function of the Su(H)-Hairless Repressor Complex, the Major Antagonist of Notch Signaling in Drosophila melanogaster. Plos Biol., 14, 2016
6XLK	Cryo-EM structure of EcmrR-DNA complex in EcmrR-RPitc-4nt 分子名称: CHAPSO, MerR family transcriptional regulator EcmrR, TETRAPHENYLANTIMONIUM ION, ... 著者 Yang, Y, Liu, C, Liu, B. 登録日 2020-06-28 公開日 2021-04-07 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural visualization of transcription activated by a multidrug-sensing MerR family regulator. Nat Commun, 12, 2021
6XLA	Cryo-EM structure of EcmrR-DNA complex in EcmrR-RPitc-3nt 分子名称: MerR family transcriptional regulator EcmrR, TETRAPHENYLANTIMONIUM ION, synthetic non-template strand DNA (54-MER), ... 著者 Yang, Y, Liu, C, Shi, W, Liu, B. 登録日 2020-06-28 公開日 2021-04-07 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural visualization of transcription activated by a multidrug-sensing MerR family regulator. Nat Commun, 12, 2021
6XL6	Cryo-EM structure of EcmrR-DNA complex in EcmrR-RPo 分子名称: CHAPSO, MerR family transcriptional regulator EcmrR, TETRAPHENYLANTIMONIUM ION, ... 著者 Yang, Y, Liu, C, Liu, B. 登録日 2020-06-28 公開日 2021-04-07 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural visualization of transcription activated by a multidrug-sensing MerR family regulator. Nat Commun, 12, 2021
8QJ7	Cryo-EM structure of human DNA polymerase alpha-primase in pre-initiation stage 1 分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA polymerase alpha catalytic subunit, DNA polymerase alpha subunit B, ... 著者 Yin, Z, Pellegrini, L. 登録日 2023-09-12 公開日 2024-02-21 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.07 Å) 主引用文献 CryoEM insights into RNA primer synthesis by the human primosome. Febs J., 291, 2024
5NKL	Crystal structure of the large fragment of DNA polymerase I from Thermus Aquaticus in a closed ternary complex with the artificial base pair dDs-dPxTP 分子名称: ACETATE ION, DNA (5'-D(*AP*AP*AP*(DNU)P*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DOC))-3'), ... 著者 Betz, K, Marx, A, Diederichs, K, Hirao, I, Kimoto, M. 登録日 2017-03-31 公開日 2017-06-28 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural Basis for Expansion of the Genetic Alphabet with an Artificial Nucleobase Pair. Angew. Chem. Int. Ed. Engl., 56, 2017
1EFA	CRYSTAL STRUCTURE OF THE LAC REPRESSOR DIMER BOUND TO OPERATOR AND THE ANTI-INDUCER ONPF 分子名称: 2-nitrophenyl beta-D-fucopyranoside, DNA (5'-D(*GP*AP*AP*T*TP*GP*TP*GP*AP*GP*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*T)-3'), LAC REPRESSOR 著者 Bell, C.E, Lewis, M. 登録日 2000-02-07 公開日 2000-03-06 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 A closer view of the conformation of the Lac repressor bound to operator. Nat.Struct.Biol., 7, 2000
5HSZ	Structure of the K. pneumonia SlmA protein bound to the C-terminal tail of the cytoskeletal cell division protein FtsZ 分子名称: C-terminal Tail of FtsZ, Nucleoid occlusion factor SlmA, SULFATE ION 著者 Zeng, W, Schumacher, M.A. 登録日 2016-01-26 公開日 2016-04-13 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structures of the nucleoid occlusion protein SlmA bound to DNA and the C-terminal domain of the cytoskeletal protein FtsZ. Proc.Natl.Acad.Sci.USA, 113, 2016
5YBC	X-ray structure of native ETS-domain domain of Ergp55 分子名称: GLYCEROL, Transcriptional regulator ERG 著者 Saxena, A.K, Gangwar, S.P. 登録日 2017-09-04 公開日 2018-09-19 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Comparative structure analysis of the ETSi domain of ERG3 and its complex with the E74 promoter DNA sequence Acta Crystallogr F Struct Biol Commun, 74, 2018
4A3F	RNA Polymerase II initial transcribing complex with a 6nt DNA-RNA hybrid and soaked with AMPCPP 分子名称: 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*DTP *TP*TP*CP*C BRU*GP*GP*TP*CP*AP*TP*T)-3', DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, ... 著者 Cheung, A.C.M, Sainsbury, S, Cramer, P. 登録日 2011-09-30 公開日 2011-12-07 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structural basis of initial RNA polymerase II transcription. EMBO J., 30, 2011
4A3J	RNA Polymerase II initial transcribing complex with a 2nt DNA-RNA hybrid and soaked with GMPCPP 分子名称: 5'-D(*AP*GP*CP*TP*AP*GP*CP*TP*TP*TP*CP*BRUP*AP*CP*CP *TP*GP*AP*AP*CP*AP*AP*CP*TP*AP*AP*CP)-3', 5'-D(*GP*TP*AP*GP*AP*AP*AP*GP*CP*TP*AP*GP*CP*TP)-3', 5'-R(*CP*AP)-3', ... 著者 Cheung, A.C.M, Sainsbury, S, Cramer, P. 登録日 2011-09-30 公開日 2011-12-07 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.7 Å) 主引用文献 Structural Basis of Initial RNA Polymerase II Transcription. Embo J., 30, 2011
4A3E	RNA Polymerase II initial transcribing complex with a 5nt DNA-RNA hybrid and soaked with AMPCPP 分子名称: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, ... 著者 Cheung, A.C.M, Sainsbury, S, Cramer, P. 登録日 2011-09-30 公開日 2011-12-07 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structural basis of initial RNA polymerase II transcription. EMBO J., 30, 2011
4A3M	RNA Polymerase II initial transcribing complex with a 4nt DNA-RNA hybrid and soaked with AMPCPP 分子名称: 5'-D(*AP*AP*GP*TP*AP*CP*TP)-3', 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*TP* TP*TP*CP*CP*BRUP*GP*GP*TP*CP*AP*TP*T)-3', 5'-R(*AP*GP*GP*A)-3', ... 著者 Cheung, A.C.M, Sainsbury, S, Cramer, P. 登録日 2011-09-30 公開日 2011-12-07 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.9 Å) 主引用文献 Structural basis of initial RNA polymerase II transcription. EMBO J., 30, 2011
4A3L	RNA Polymerase II initial transcribing complex with a 7nt DNA-RNA hybrid and soaked with AMPCPP 分子名称: 5'-D(*AP*AP*GP*TP*AP*CP*TP)-3', 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*TP *TP*TP*CP*CP*BRU*GP*GP*TP*CP*AP*TP*T)-3', 5'-R(*AP*CP*CP*AP*GP*GP*AP)-3', ... 著者 Cheung, A.C.M, Sainsbury, S, Cramer, P. 登録日 2011-09-30 公開日 2011-12-07 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structural basis of initial RNA polymerase II transcription. EMBO J., 30, 2011
4A3K	RNA Polymerase II initial transcribing complex with a 7nt DNA-RNA hybrid 分子名称: 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*DTP *TP*TP*CP*CP*BRU*GP*GP*TP*CP*AP*TP*T)-3', 5'-D(*TP*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP)-3', 5'-R(*AP*CP*CP*AP*GP*GP*AP)-3', ... 著者 Cheung, A.C.M, Sainsbury, S, Cramer, P. 登録日 2011-09-30 公開日 2011-12-07 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structural Basis of Initial RNA Polymerase II Transcription. Embo J., 30, 2011
8XAX	Cryo-EM structure of an anti-phage defense complex bound to AMPPNP and DNA at state 2 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-binding protein, DUF4297, ... 著者 An, Q, Deng, Z. 登録日 2023-12-05 公開日 2024-06-05 最終更新日 2024-08-14 実験手法 ELECTRON MICROSCOPY (2.92 Å) 主引用文献 Molecular and structural basis of an ATPase-nuclease dual-enzyme anti-phage defense complex. Cell Res., 34, 2024
8XAW	Cryo-EM structure of an anti-phage defense complex bound to AMPPNP and DNA at state 1 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-binding protein, DUF4297, ... 著者 An, Q, Deng, Z. 登録日 2023-12-05 公開日 2024-06-05 最終更新日 2024-08-14 実験手法 ELECTRON MICROSCOPY (2.73 Å) 主引用文献 Molecular and structural basis of an ATPase-nuclease dual-enzyme anti-phage defense complex. Cell Res., 34, 2024
4F4N	Crystal structure of 2-se-thymidine derivatized dna 8mer 分子名称: 5'-D(*GP*TP*GP*(US3)P*AP*CP*AP*C)-3' 著者 Zhang, W, Sheng, J, Huang, Z. 登録日 2012-05-10 公開日 2012-06-13 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Crystal structure of 2-se-thymidine derivatized dna 8mer TO BE PUBLISHED
5N07	Structure of the [4Fe-4S] form of the NO response regulator NsrR 分子名称: CHLORIDE ION, HTH-type transcriptional repressor NsrR, IRON/SULFUR CLUSTER, ... 著者 Volbeda, A, Fontecilla-Camps, J.C. 登録日 2017-02-02 公開日 2017-04-26 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal structures of the NO sensor NsrR reveal how its iron-sulfur cluster modulates DNA binding. Nat Commun, 8, 2017

<384385386387388389390391392393394395396397398399>