PDB: 13258 件ウェブページステータス検索Chemie searchBIRD

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3F71	Crystal structure of E18D DJ-1 with oxidized C106 分子名称: Protein DJ-1 著者 Lakshminarasimhan, M, Wilson, M.A. 登録日 2008-11-07 公開日 2008-12-30 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Formation of a Stabilized Cysteine Sulfinic Acid Is Critical for the Mitochondrial Function of the Parkinsonism Protein DJ-1. J.Biol.Chem., 284, 2009
1M48	Crystal Structure of Human IL-2 Complexed with (R)-N-[2-[1-(Aminoiminomethyl)-3-piperidinyl]-1-oxoethyl]-4-(phenylethynyl)-L-phenylalanine methyl ester 分子名称: 2-[3-METHYL-4-(N-METHYL-GUANIDINO)-BUTYRYLAMINO]-3-(4-PHENYLETHYNYL-PHENYL)-PROPIONIC ACID METHYL ESTER, interleukin-2 著者 Arkin, M.A, Randal, M, DeLano, W.L, Hyde, J, Luong, T.N, Oslob, J.D, Raphael, D.R, Taylor, L, Wang, J, McDowell, R.S, Wells, J.A, Braisted, A.C. 登録日 2002-07-02 公開日 2002-07-31 最終更新日 2017-10-11 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Binding of small molecules to an adaptive protein-protein interface Proc.Natl.Acad.Sci.USA, 100, 2003
3SF8	Structural insights into thiol stabilization of DJ-1 分子名称: Protein DJ-1 著者 Premkumar, L, Dobaczewska, M.K, Riedl, S.J. 登録日 2011-06-13 公開日 2011-10-05 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.56 Å) 主引用文献 Identification of an artificial peptide motif that binds and stabilizes reduced human DJ-1. J.Struct.Biol., 176, 2011
1TTU	Crystal Structure of CSL bound to DNA 分子名称: 1,2-ETHANEDIOL, 5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*CP*CP*AP*CP*AP*GP*T)-3', 5'-D(*TP*TP*AP*CP*TP*GP*TP*GP*GP*GP*AP*AP*AP*GP*A)-3', ... 著者 Kovall, R.A, Hendrickson, W.A. 登録日 2004-06-23 公開日 2004-08-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Crystal structure of the nuclear effector of Notch signaling, CSL, bound to DNA Embo J., 23, 2004
3BAG	Crystal structure of K112N/N114A mutant of Human acidic fibroblast growth factor 分子名称: FORMIC ACID, Heparin-binding growth factor 1 著者 Lee, J, Blaber, M. 登録日 2007-11-07 公開日 2008-04-15 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 A logical OR redundancy within the Asx-Pro-Asx-Gly type I beta-turn motif. J.Mol.Biol., 377, 2008
3EZG	Crystal structure of E18Q DJ-1 with oxidized C106 分子名称: Protein DJ-1 著者 Lakshminarasimhan, M, Wilson, M.A. 登録日 2008-10-22 公開日 2008-12-30 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.15 Å) 主引用文献 Formation of a stabilized cysteine sulfinic acid is critical for the mitochondrial function of the parkinsonism protein DJ-1. J.Biol.Chem., 284, 2009
3BAU	Crystal structure of K12V/L26D/D28A mutant of Human acidic fibroblast growth factor 分子名称: FORMIC ACID, Heparin-binding growth factor 1, SULFATE ION 著者 Lee, J, Blaber, M. 登録日 2007-11-08 公開日 2008-04-15 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 A logical OR redundancy within the Asx-Pro-Asx-Gly type I beta-turn motif. J.Mol.Biol., 377, 2008
4NU1	Crystal structure of a transition state mimic of the GSK-3/Axin complex bound to phosphorylated N-terminal auto-inhibitory pS9 peptide 分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Axin-1, ... 著者 Chu, M.L.-H, Stamos, J.L, Enos, M.D, Shah, N, Weis, W.I. 登録日 2013-12-03 公開日 2014-03-26 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis of GSK-3 inhibition by N-terminal phosphorylation and by the Wnt receptor LRP6. Elife, 3, 2014
5I1Q	Second bromodomain of TAF1 bound to a pyrrolopyridone compound 分子名称: 3-[6-(but-3-en-1-yl)-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridin-4-yl]-N,N-dimethylbenzamide, Transcription initiation factor TFIID subunit 1 著者 Tang, Y, Poy, F, Bellon, S.F. 登録日 2016-01-09 公開日 2016-06-08 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Diving into the Water: Inducible Binding Conformations for BRD4, TAF1(2), BRD9, and CECR2 Bromodomains. J.Med.Chem., 59, 2016
4NEJ	Small molecular fragment bound to crystal contact interface of Interleukin-2 分子名称: 5-methylfuran-2-carboxylic acid, Interleukin-2 著者 Brenke, R, Jehle, S, Vajda, S, Allen, K.N, Kozakov, D. 登録日 2013-10-29 公開日 2014-11-19 実験手法 X-RAY DIFFRACTION (1.919 Å) 主引用文献 Small molecular fragments bound to binding energy hot-spot in crystal contact interface of Interleukin-2 To be Published
4S04	Crystal structure of Klebsiella pneumoniae PmrA in complex with PmrA box DNA 分子名称: BERYLLIUM TRIFLUORIDE ION, DNA (25-MER), DNA-binding transcriptional regulator BasR, ... 著者 Hsiao, C.D, Weng, T.H, Li, Y.C. 登録日 2014-12-30 公開日 2015-11-11 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structure and dynamics of polymyxin-resistance-associated response regulator PmrA in complex with promoter DNA. Nat Commun, 6, 2015
5I29	TAF1(2) bound to a pyrrolopyridone compound 分子名称: CALCIUM ION, N,N-dimethyl-3-(6-methyl-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridin-4-yl)benzamide, Transcription initiation factor TFIID subunit 1 著者 Tang, Y, Poy, F, Bellon, S.F. 登録日 2016-02-08 公開日 2016-06-08 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.21 Å) 主引用文献 Diving into the Water: Inducible Binding Conformations for BRD4, TAF1(2), BRD9, and CECR2 Bromodomains. J.Med.Chem., 59, 2016
8GI5	Cryo-EM of self-assembling pyrene peptide with Ca2+ 分子名称: Pyrene peptide 著者 Rich-New, S.T, Guo, J, Xu, B, Wang, F. 登録日 2023-03-13 公開日 2023-06-14 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Hierarchical Assembly of Intrinsically Disordered Short Peptides. Chem, 9, 2023
4RUL	Crystal structure of full-length E.Coli topoisomerase I in complex with ssDNA 分子名称: DNA topoisomerase 1, GLYCEROL, SULFATE ION, ... 著者 Tan, K, Chen, B, Tse-Dinh, Y.C. 登録日 2014-11-20 公開日 2015-11-04 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural basis for suppression of hypernegative DNA supercoiling by E. coli topoisomerase I. Nucleic Acids Res., 43, 2015
3PKJ	Human SIRT6 crystal structure in complex with 2'-N-Acetyl ADP ribose 分子名称: NAD-dependent deacetylase sirtuin-6, SULFATE ION, UNKNOWN ATOM OR ION, ... 著者 Pan, P.W, Dong, A, Qiu, W, Loppnau, P, Wang, J, Ravichandran, M, Walker, J.R, Bountra, C, Weigelt, J, Arrowsmith, C.H, Min, J, Edwards, A.M, Structural Genomics Consortium (SGC) 登録日 2010-11-11 公開日 2011-01-26 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.12 Å) 主引用文献 Structure and biochemical functions of SIRT6. J.Biol.Chem., 286, 2011
4U85	Human Pin1 with cysteine sulfinic acid 113 分子名称: POLYETHYLENE GLYCOL (N=34), Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 著者 Li, W, Zhang, Y. 登録日 2014-08-01 公開日 2015-04-08 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Pin1 cysteine-113 oxidation inhibits its catalytic activity and cellular function in Alzheimer's disease. Neurobiol.Dis., 76, 2015
5EYI	Structure of PRRSV apo-NSP11 at 2.16A 分子名称: 2-(2-METHOXYETHOXY)ETHANOL, CHLORIDE ION, Non-structural protein 11, ... 著者 Zhang, M.F, Chen, Z. 登録日 2015-11-25 公開日 2016-10-12 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.16 Å) 主引用文献 Structural Biology of the Arterivirus nsp11 Endoribonucleases. J. Virol., 91, 2017
4P5O	Structure of an RBX1-UBC12~NEDD8-CUL1-DCN1 complex: a RING-E3-E2~ubiquitin-like protein-substrate intermediate trapped in action 分子名称: Cullin-1, DCN1-like protein 1, E3 ubiquitin-protein ligase RBX1, ... 著者 Scott, D.C, Schulman, B.A. 登録日 2014-03-18 公開日 2014-07-02 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (3.1071 Å) 主引用文献 Structure of a RING E3 Trapped in Action Reveals Ligation Mechanism for the Ubiquitin-like Protein NEDD8. Cell, 157, 2014
5F17	Structure of EAV NSP11 K170A mutant at 3.19A 分子名称: Non-structural protein 11 著者 Zhang, M.F, Chen, Z.Z. 登録日 2015-11-30 公開日 2016-11-16 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structure of EAV NSP11 K170A mutant at 3.19A To Be Published
2R5Y	Structure of Scr/Exd complex bound to a consensus Hox-Exd site 分子名称: DNA (5'-D(*DAP*DCP*DTP*DCP*DTP*DAP*DTP*DGP*DAP*DTP*DTP*DTP*DAP*DTP*DGP*DGP*DGP*DCP*DTP*DG)-3'), DNA (5'-D(*DTP*DCP*DAP*DGP*DCP*DCP*DCP*DAP*DTP*DAP*DAP*DAP*DTP*DCP*DAP*DTP*DAP*DGP*DAP*DG)-3'), Homeobox protein extradenticle, ... 著者 Aggarwal, A.K, Passner, J.M, Jain, R. 登録日 2007-09-04 公開日 2008-02-05 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Functional specificity of a Hox protein mediated by the recognition of minor groove structure Cell(Cambridge,Mass.), 131, 2007
4U86	Human Pin1 with cysteine sulfonic acid 113 分子名称: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 著者 Li, W, Zhang, Y. 登録日 2014-08-01 公開日 2015-04-08 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Pin1 cysteine-113 oxidation inhibits its catalytic activity and cellular function in Alzheimer's disease. Neurobiol.Dis., 76, 2015
4U5T	Crystal Structure of VBP Leucine Zipper with Bound Arylstibonic Acid 分子名称: (2Z)-3-{3-[dihydroxy(oxido)-lambda~5~-stibanyl]phenyl}prop-2-enoic acid, VBP leucine zipper 著者 Stagno, J.R, Ji, X. 登録日 2014-07-25 公開日 2014-08-06 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (3.301 Å) 主引用文献 P6981, an arylstibonic acid, is a novel low nanomolar inhibitor of cAMP response element-binding protein binding to DNA. Mol.Pharmacol., 82, 2012
3PKI	Human SIRT6 crystal structure in complex with ADP ribose 分子名称: NAD-dependent deacetylase sirtuin-6, SULFATE ION, UNKNOWN ATOM OR ION, ... 著者 Pan, P.W, Dong, A, Qiu, W, Loppnau, P, Wang, J, Ravichandran, M, Bochkarev, A, Bountra, C, Weigelt, J, Arrowsmith, C.H, Min, J, Edwards, A.M, Structural Genomics Consortium (SGC) 登録日 2010-11-11 公開日 2011-01-26 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 Structure and biochemical functions of SIRT6. J.Biol.Chem., 286, 2011
4U84	Human Pin1 with S-hydroxyl-cysteine 113 分子名称: POLYETHYLENE GLYCOL (N=34), Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 著者 Li, W, Zhang, Y. 登録日 2014-08-01 公開日 2015-04-08 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Pin1 cysteine-113 oxidation inhibits its catalytic activity and cellular function in Alzheimer's disease. Neurobiol.Dis., 76, 2015
8OK1	WD repeat containing protein 5 (WDR5)- N225A mutant 分子名称: Glutathione S-transferase class-mu 26 kDa isozyme,WD repeat-containing protein 5 著者 Wolf, E, Boergel, A. 登録日 2023-03-26 公開日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 A structural competition involving WDR5 times circadian oscillations To Be Published

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