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6T9I
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cryo-EM structure of transcription coactivator SAGA
分子名称: Protein SPT3, SAGA-associated factor 73, Transcription factor SPT20, ...
著者Wang, H, Cheung, A, Cramer, P.
登録日2019-10-28
公開日2020-01-29
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure of the transcription coactivator SAGA.
Nature, 577, 2020
4D25
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Crystal structure of the Bombyx mori Vasa helicase (E339Q) in complex with RNA and AMPPNP
分子名称: 5'-R(*UP*GP*AP*CP*AP*UP)-3', BMVLG PROTEIN, GLYCEROL, ...
著者Spinelli, P, Pillai, R.S, Kadlec, J, Cusack, S.
登録日2014-05-07
公開日2014-06-18
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献RNA Clamping by Vasa Assembles a Pirna Amplifier Complex on Transposon Transcripts.
Cell(Cambridge,Mass.), 157, 2014
4D2M
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BU of 4d2m by Molmil
Vaccinia Virus F1L bound to Bim BH3
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, BCL-2-LIKE PROTEIN 11, CHLORIDE ION, ...
著者Kvansakul, M, Colman, P.M.
登録日2014-05-12
公開日2014-06-04
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Insight Into Bh3-Domain Binding of Vaccinia Virus Anti-Apoptotic F1L.
J.Virol., 88, 2014
6CSB
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BU of 6csb by Molmil
V308E mutant of cytochrome P450 2D6 complexed with thioridazine
分子名称: 10-{2-[(2R)-1-methylpiperidin-2-yl]ethyl}-2-(methylsulfanyl)-10H-phenothiazine, ACETATE ION, Cytochrome P450 2D6, ...
著者Yang, Y.T, Fujita, K, Wang, P.F, Im, S.C, Pearl, N.M, Meagher, J, Stuckey, J, Waskell, L.
登録日2018-03-20
公開日2019-03-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.394 Å)
主引用文献Characteristic conformational changes on the distal and proximal surfaces of cytochrome P450 2D6 in response to substrate binding
To Be Published
6T1P
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BU of 6t1p by Molmil
ASR Alternansucrase in complex with isomaltononaose
分子名称: Alternansucrase, CALCIUM ION, alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose, ...
著者Cioci, G, Molina, M, Moulis, C, Remaud-Simeon, M.
登録日2019-10-04
公開日2020-06-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献A specific oligosaccharide-binding site in the alternansucrase catalytic domain mediates alternan elongation.
J.Biol.Chem., 295, 2020
6CSX
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BU of 6csx by Molmil
Single particles Cryo-EM structure of AcrB D407A associated with lipid bilayer at 3.0 Angstrom
分子名称: DODECANE, Multidrug efflux pump subunit AcrB, PHOSPHATIDYLETHANOLAMINE
著者Qiu, W, Fu, Z, Guo, Y.
登録日2018-03-21
公開日2018-12-05
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure and activity of lipid bilayer within a membrane-protein transporter.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5EPP
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BU of 5epp by Molmil
Structural Insights into the Interaction of p97 N-terminus Domain and VBM Motif in Rhomboid Protease, RHBDL4
分子名称: Rhomboid-related protein 4, Transitional endoplasmic reticulum ATPase
著者Lim, J.J, Lee, Y, Ly, T.T, Kang, J.Y, Lee, J.-G, An, J.Y, Youn, H.-S, Park, K.R, Kim, T.G, Yang, J.K, Jun, Y, Eom, S.H.
登録日2015-11-12
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structural insights into the interaction of p97 N-terminus domain and VBM in rhomboid protease, RHBDL4.
Biochem.J., 473, 2016
5EFM
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Beclin 1 Flexible-helical Domian (FHD) (141-171)
分子名称: Beclin-1, SULFATE ION
著者Sinha, S, Mei, Y.
登録日2015-10-23
公開日2016-07-20
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Conformational Flexibility Enables the Function of a BECN1 Region Essential for Starvation-Mediated Autophagy.
Biochemistry, 55, 2016
6ZIY
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BU of 6ziy by Molmil
Respiratory complex I from Thermus thermophilus, NADH dataset, major state
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
著者Kaszuba, K, Tambalo, M, Gallagher, G.T, Sazanov, L.A.
登録日2020-06-26
公開日2020-09-02
実験手法ELECTRON MICROSCOPY (4.25 Å)
主引用文献Key role of quinone in the mechanism of respiratory complex I.
Nat Commun, 11, 2020
6TA4
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BU of 6ta4 by Molmil
Human kinesin-5 motor domain in the AMPPNP state bound to microtubules
分子名称: GUANOSINE-5'-TRIPHOSPHATE, Kinesin-like protein KIF11, MAGNESIUM ION, ...
著者Pena, A.P, Sweeney, A, Cook, A.D, Moores, C.A, Topf, M.
登録日2019-10-29
公開日2020-03-04
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (6.1 Å)
主引用文献Structure of Microtubule-Trapped Human Kinesin-5 and Its Mechanism of Inhibition Revealed Using Cryoelectron Microscopy.
Structure, 28, 2020
6ZA5
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M. tuberculosis salicylate synthase MbtI in complex with salicylate and Mg2+
分子名称: 2-HYDROXYBENZOIC ACID, ACETATE ION, MAGNESIUM ION, ...
著者Mori, M, Villa, S, Meneghetti, F, Bellinzoni, M.
登録日2020-06-04
公開日2020-07-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.109 Å)
主引用文献Shedding X-ray Light on the Role of Magnesium in the Activity ofMycobacterium tuberculosisSalicylate Synthase (MbtI) for Drug Design.
J.Med.Chem., 63, 2020
5EQQ
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BU of 5eqq by Molmil
Crystal structure of HCV NS3/4A WT protease in complex with 5172-Linear (MK-5172 linear analogue)
分子名称: NS3 protease, SULFATE ION, ZINC ION, ...
著者Soumana, D, Yilmaz, N.K, Ali, A, Prachanronarong, K.L, Aydin, C, Schiffer, C.A.
登録日2015-11-13
公開日2016-01-13
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural and Thermodynamic Effects of Macrocyclization in HCV NS3/4A Inhibitor MK-5172.
Acs Chem.Biol., 11, 2016
6ZJL
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BU of 6zjl by Molmil
Respiratory complex I from Thermus thermophilus, NAD+ dataset, major state
分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
著者Kaszuba, K, Tambalo, M, Gallagher, G.T, Sazanov, L.A.
登録日2020-06-29
公開日2020-09-02
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Key role of quinone in the mechanism of respiratory complex I.
Nat Commun, 11, 2020
4CQD
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The reaction mechanism of the N-isopropylammelide isopropylaminohydrolase AtzC: insights from structural and mutagenesis studies
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MALONATE ION, ...
著者Balotra, S, Newman, J, French, N.G, Peat, T.S, Scott, C.
登録日2014-02-13
公開日2015-03-04
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献X-Ray Structure and Mutagenesis Studies of the N-Isopropylammelide Isopropylaminohydrolase, Atzc
Plos One, 1, 2015
6T7C
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BU of 6t7c by Molmil
Structure of two copies of human Sox11 transcription factor in complex with a nucleosome
分子名称: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
著者Dodonova, S.O, Zhu, F, Dienemann, C, Taipale, J, Cramer, P.
登録日2019-10-21
公開日2020-04-29
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Nucleosome-bound SOX2 and SOX11 structures elucidate pioneer factor function.
Nature, 580, 2020
6TG4
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BU of 6tg4 by Molmil
Tankyrase 2 in complex with an inhibitor (OM-1700)
分子名称: N-[3-[5-(5-ethoxypyridin-2-yl)-4-(2-fluorophenyl)-1,2,4-triazol-3-yl]cyclobutyl]pyridine-2-carboxamide, Tankyrase-2, ZINC ION
著者Sowa, S.T, Lehtio, L.
登録日2019-11-15
公開日2020-07-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Preclinical Lead Optimization of a 1,2,4-Triazole Based Tankyrase Inhibitor.
J.Med.Chem., 63, 2020
5EGV
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BU of 5egv by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex the 3,4-diaryl-furan derivative 3-chloranyl-4-[4-(2-chloranyl-4-oxidanyl-phenyl)furan-3-yl]phenol
分子名称: 3-chloranyl-4-[4-(2-chloranyl-4-oxidanyl-phenyl)furan-3-yl]phenol, Estrogen receptor, NCOA2
著者Nwachukwu, J.C, Srinivasan, S, Zheng, Y, Wang, S, Min, J, Dong, C, Liao, Z, Cavett, V, Nowak, J, Houtman, R, Carlson, K.E, Josan, J.S, Elemento, O, Katzenellenbogen, J.A, Zhou, H.B, Nettles, K.W.
登録日2015-10-27
公開日2016-05-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.863 Å)
主引用文献Predictive features of ligand-specific signaling through the estrogen receptor.
Mol.Syst.Biol., 12, 2016
6THD
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BU of 6thd by Molmil
Multiple Genomic RNA-Coat Protein Contacts Play Vital Roles in the Assembly of Infectious Enterovirus-E
分子名称: Genome polyprotein, MYRISTIC ACID, SULFATE ION
著者Chandler-Bostock, R, Mata, C.P, Bingham, R, Dykeman, E.J, Meng, B, Tuthill, T.J, Rowlands, D.J, Ranson, N.A, Twarock, R, Stockley, P.G.
登録日2019-11-19
公開日2020-12-09
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.23 Å)
主引用文献Assembly of infectious enteroviruses depends on multiple, conserved genomic RNA-coat protein contacts.
Plos Pathog., 16, 2020
6D0R
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BU of 6d0r by Molmil
Structure of a DNA retention-prone PCNA variant
分子名称: Proliferating cell nuclear antigen
著者Kelch, B.A, Gaubitz, C.
登録日2018-04-10
公開日2019-05-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.85856962 Å)
主引用文献Effective mismatch repair depends on timely control of PCNA retention on DNA by the Elg1 complex.
Nucleic Acids Res., 47, 2019
5EI1
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BU of 5ei1 by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with the imidazopyridine derivative 2-(4-hydroxyphenyl)-3-iodanyl-imidazo[1,2-a]pyridin-6-ol
分子名称: 2-(4-hydroxyphenyl)-3-iodanyl-imidazo[1,2-a]pyridin-6-ol, Estrogen receptor, NCOA2
著者Nwachukwu, J.C, Srinivasan, S, Zheng, Y, Wang, S, Min, J, Dong, C, Liao, Z, Cavett, V, Nowak, J, Houtman, R, Carlson, K.E, Josan, J.S, Elemento, O, Katzenellenbogen, J.A, Zhou, H.B, Nettles, K.W.
登録日2015-10-29
公開日2016-05-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Predictive features of ligand-specific signaling through the estrogen receptor.
Mol.Syst.Biol., 12, 2016
4D78
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Cytochrome P450 3A4 bound to an inhibitor
分子名称: CYTOCHROME P450 3A4, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Sevrioukova, I, Poulos, T.
登録日2014-11-21
公開日2015-09-23
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure-Based Inhibitor Design for Evaluation of a Cyp3A4 Pharmacophore Model.
J.Med.Chem., 59, 2016
5ELM
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BU of 5elm by Molmil
Crystal structure of L-aspartate/glutamate specific racemase in complex with L-glutamate
分子名称: Asp/Glu_racemase family protein, GLUTAMIC ACID, GLYCEROL, ...
著者Ahn, J.W, Chang, J.H, Kim, K.J.
登録日2015-11-04
公開日2015-11-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for an atypical active site of an l-aspartate/glutamate-specific racemase from Escherichia coli
Febs Lett., 589, 2015
4CQB
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The reaction mechanism of the N-isopropylammelide isopropylaminohydrolase AtzC: insights from structural and mutagenesis studies
分子名称: CHLORIDE ION, DIMETHYL SULFOXIDE, MALONATE ION, ...
著者Balotra, S, Newman, J, French, N.G, Peat, T.S, Scott, C.
登録日2014-02-13
公開日2015-03-04
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献X-Ray Structure and Mutagenesis Studies of the N-Isopropylammelide Isopropylaminohydrolase, Atzc
Plos One, 1, 2015
5EMH
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Crystal structure of Iridoid Synthase from Cantharanthus roseus in complex with NADP+
分子名称: Iridoid synthase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Sandholu, A, Thulasiram, H.V, Kulkarni, K.A.
登録日2015-11-06
公開日2015-11-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Dynamics of loops at the substrate entry channel determine the specificity of iridoid synthases.
FEBS Lett., 592, 2018
6CZQ
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A V-to-F substitution in SK2 channels causes Ca2+ hypersensitivity and improves locomotion in a C. elegans ALS model
分子名称: CALCIUM ION, Calmodulin-1, SULFATE ION, ...
著者Nam, Y.W, Zhang, M.
登録日2018-04-09
公開日2018-08-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A V-to-F substitution in SK2 channels causes Ca2+hypersensitivity and improves locomotion in a C. elegans ALS model.
Sci Rep, 8, 2018

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