7XFN
| Structure of nucleosome-DI complex (-55I, Apo state) | 分子名称: | DNA (152-MER), Histone H2A type 1, Histone H2B 1.1, ... | 著者 | Zheng, L, Tsai, B, Gao, N. | 登録日 | 2022-04-01 | 公開日 | 2023-04-19 | 最終更新日 | 2023-11-08 | 実験手法 | ELECTRON MICROSCOPY (2.8 Å) | 主引用文献 | Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome. Cell Discov, 9, 2023
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3AV1
| The human nucleosome structure containing the histone variant H3.2 | 分子名称: | 146-MER DNA, Histone H2A type 1-B/E, Histone H2B type 1-J, ... | 著者 | Tachiwana, H, Osakabe, A, Shiga, T, Miya, Y, Kimura, H, Kagawa, W, Kurumizaka, H. | 登録日 | 2011-02-18 | 公開日 | 2011-06-01 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Structures of human nucleosomes containing major histone H3 variants Acta Crystallogr.,Sect.D, 67, 2011
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7XFM
| Structure of nucleosome-AAG complex (A-53I, post-catalytic state) | 分子名称: | DNA (152-MER), DNA-3-methyladenine glycosylase, Histone H2A type 1, ... | 著者 | Zheng, L, Tsai, B, Gao, N. | 登録日 | 2022-04-01 | 公開日 | 2023-04-19 | 最終更新日 | 2023-11-08 | 実験手法 | ELECTRON MICROSCOPY (3.1 Å) | 主引用文献 | Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome. Cell Discov, 9, 2023
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7XFC
| Structure of nucleosome-DI complex (-30I, Apo state) | 分子名称: | DNA (152-MER), Histone H2A type 1, Histone H2B 1.1, ... | 著者 | Zheng, L, Tsai, B, Gao, N. | 登録日 | 2022-04-01 | 公開日 | 2023-04-19 | 最終更新日 | 2023-11-08 | 実験手法 | ELECTRON MICROSCOPY (2.9 Å) | 主引用文献 | Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome. Cell Discov, 9, 2023
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7XFI
| Structure of nucleosome-DI complex (-50I, Apo state) | 分子名称: | DNA (152-MER), Histone H2A type 1, Histone H2B 1.1, ... | 著者 | Zheng, L, Tsai, B, Gao, N. | 登録日 | 2022-04-01 | 公開日 | 2023-04-19 | 最終更新日 | 2023-11-08 | 実験手法 | ELECTRON MICROSCOPY (2.9 Å) | 主引用文献 | Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome. Cell Discov, 9, 2023
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7XFH
| Structure of nucleosome-AAG complex (A-30I, post-catalytic state) | 分子名称: | DNA (152-MER), DNA-3-methyladenine glycosylase, Histone H2A type 1, ... | 著者 | Zheng, L, Tsai, B, Gao, N. | 登録日 | 2022-04-01 | 公開日 | 2023-04-19 | 最終更新日 | 2023-11-08 | 実験手法 | ELECTRON MICROSCOPY (2.9 Å) | 主引用文献 | Structural and mechanistic insights into the DNA glycosylase AAG-mediated base excision in nucleosome. Cell Discov, 9, 2023
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3AV2
| The human nucleosome structure containing the histone variant H3.3 | 分子名称: | 146-MER DNA, Histone H2A type 1-B/E, Histone H2B type 1-J, ... | 著者 | Tachiwana, H, Osakabe, A, Shiga, T, Miya, M, Kimura, H, Kagawa, W, Kurumizaka, H. | 登録日 | 2011-02-18 | 公開日 | 2011-06-01 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Structures of human nucleosomes containing major histone H3 variants Acta Crystallogr.,Sect.D, 67, 2011
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4L0M
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8G6H
| H2BK120ub+H3K79me2-modified nucleosome ubiquitin position 6 | 分子名称: | 601 DNA (185-MER), Histone H2A, Histone H2B 1.1, ... | 著者 | Hicks, C.W, Wolberger, C, Keogh, M. | 登録日 | 2023-02-15 | 公開日 | 2024-02-21 | 最終更新日 | 2024-09-25 | 実験手法 | ELECTRON MICROSCOPY (3.06 Å) | 主引用文献 | Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch. Nucleic Acids Res., 52, 2024
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7VDV
| The overall structure of human chromatin remodeling PBAF-nucleosome complex | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, AT-rich interactive domain-containing protein 2,AT-rich interactive domain-containing protein 2, Actin, ... | 著者 | Chen, Z.C, Chen, K.J, Yuan, J.J. | 登録日 | 2021-09-07 | 公開日 | 2022-05-18 | 実験手法 | ELECTRON MICROSCOPY (3.4 Å) | 主引用文献 | Structure of human chromatin-remodelling PBAF complex bound to a nucleosome. Nature, 605, 2022
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7E8D
| NSD2 E1099K mutant bound to nucleosome | 分子名称: | DNA (185-MER), Histone H2A type 1, Histone H2B type 1-J, ... | 著者 | Sengoku, T, Sato, K, Nishizawa, T, Nureki, O, Ogata, K. | 登録日 | 2021-03-01 | 公開日 | 2021-11-10 | 最終更新日 | 2024-06-05 | 実験手法 | ELECTRON MICROSCOPY (2.8 Å) | 主引用文献 | Structural basis of the regulation of the normal and oncogenic methylation of nucleosomal histone H3 Lys36 by NSD2. Nat Commun, 12, 2021
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4PNP
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3HVT
| STRUCTURAL BASIS OF ASYMMETRY IN THE HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE HETERODIMER | 分子名称: | 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE, HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P51), HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P66) | 著者 | Steitz, T.A, Smerdon, S.J, Jaeger, J, Wang, J, Kohlstaedt, L.A, Chirino, A.J, Friedman, J.M, Rice, P.A. | 登録日 | 1994-07-25 | 公開日 | 1994-10-15 | 最終更新日 | 2024-02-21 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | Structure of the binding site for nonnucleoside inhibitors of the reverse transcriptase of human immunodeficiency virus type 1. Proc.Natl.Acad.Sci.Usa, 91, 1994
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8HR1
| Cryo-EM structure of SSX1 bound to the unmodified nucleosome at a resolution of 3.02 angstrom | 分子名称: | DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ... | 著者 | Zebin, T, Ai, H.S, Ziyu, X, Man, P, Liu, L. | 登録日 | 2022-12-14 | 公開日 | 2023-09-13 | 最終更新日 | 2024-03-06 | 実験手法 | ELECTRON MICROSCOPY (3.02 Å) | 主引用文献 | Synovial sarcoma X breakpoint 1 protein uses a cryptic groove to selectively recognize H2AK119Ub nucleosomes. Nat.Struct.Mol.Biol., 31, 2024
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8HQY
| Cryo-EM structure of SSX1 bound to the H2AK119Ub nucleosome at a resolution of 3.05 angstrom | 分子名称: | DNA (136-MER), DNA (137-MER), Histone H2A type 1-B/E, ... | 著者 | Zebin, T, Ai, H.S, Ziyu, X, GuoChao, C, Man, P, Liu, L. | 登録日 | 2022-12-14 | 公開日 | 2023-09-27 | 最終更新日 | 2024-03-06 | 実験手法 | ELECTRON MICROSCOPY (3.05 Å) | 主引用文献 | Synovial sarcoma X breakpoint 1 protein uses a cryptic groove to selectively recognize H2AK119Ub nucleosomes. Nat.Struct.Mol.Biol., 31, 2024
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4HQI
| Structure of O6-Benzyl-2'-deoxyguanosine opposite perimidinone-derived synthetic nucleoside in DNA duplex | 分子名称: | SPERMINE, STRONTIUM ION, Short modified nucleic acids | 著者 | Kowal, E.A, Lad, R, Pallan, P.S, Muffly, E, Wawrzak, Z, Egli, M, Sturla, S.J, Stone, M.P. | 登録日 | 2012-10-25 | 公開日 | 2013-07-10 | 最終更新日 | 2024-02-28 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Recognition of O6-benzyl-2'-deoxyguanosine by a perimidinone-derived synthetic nucleoside: a DNA interstrand stacking interaction. Nucleic Acids Res., 41, 2013
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8G6S
| H2AK119ub-modified nucleosome ubiquitin position 2 | 分子名称: | 601 DNA (147-MER), Histone H2A, Histone H2B 1.1, ... | 著者 | Hicks, C.W, Wolberger, C, Keogh, M. | 登録日 | 2023-02-15 | 公開日 | 2024-02-21 | 最終更新日 | 2024-09-25 | 実験手法 | ELECTRON MICROSCOPY (3.47 Å) | 主引用文献 | Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch. Nucleic Acids Res., 52, 2024
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8KCB
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7Y00
| Cryo-EM structure of the nucleosome containing 169 base-pair DNA with a p53 target sequence | 分子名称: | DNA (169-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ... | 著者 | Nishimura, M, Nozawa, K, Takizawa, Y, Kurumizaka, H. | 登録日 | 2022-06-03 | 公開日 | 2022-10-19 | 最終更新日 | 2024-07-03 | 実験手法 | ELECTRON MICROSCOPY (3.96 Å) | 主引用文献 | Structural basis for p53 binding to its nucleosomal target DNA sequence. Pnas Nexus, 1, 2022
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7XZY
| Cryo-EM structure of the nucleosome containing 193 base-pair DNA with a p53 target sequence | 分子名称: | DNA (193-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ... | 著者 | Nishimura, M, Nozawa, K, Takizawa, Y, Kurumizaka, H. | 登録日 | 2022-06-03 | 公開日 | 2022-10-19 | 最終更新日 | 2024-07-03 | 実験手法 | ELECTRON MICROSCOPY (3.97 Å) | 主引用文献 | Structural basis for p53 binding to its nucleosomal target DNA sequence. Pnas Nexus, 1, 2022
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5B0Z
| The crystal structure of the nucleosome containing H3.2, at 1.98 A resolution | 分子名称: | CHLORIDE ION, DNA (146-MER), Histone H2A type 1-B/E, ... | 著者 | Suzuki, Y, Horikoshi, N, Kato, D, Kurumizaka, H. | 登録日 | 2015-11-14 | 公開日 | 2016-01-27 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.987 Å) | 主引用文献 | Crystal structure of the nucleosome containing histone H3 with crotonylated lysine 122 Biochem.Biophys.Res.Commun., 469, 2016
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7VDT
| The motor-nucleosome module of human chromatin remodeling PBAF-nucleosome complex | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA (207-MER), ... | 著者 | Chen, Z.C, Chen, K.J, Yuan, J.J. | 登録日 | 2021-09-07 | 公開日 | 2022-05-18 | 実験手法 | ELECTRON MICROSCOPY (2.8 Å) | 主引用文献 | Structure of human chromatin-remodelling PBAF complex bound to a nucleosome. Nature, 605, 2022
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5B0Y
| Crystal structure of the nucleosome containing histone H3 with the crotonylated lysine 122 | 分子名称: | CHLORIDE ION, DNA (146-MER), Histone H2A type 1-B/E, ... | 著者 | Suzuki, Y, Horikoshi, N, Kurumizaka, H. | 登録日 | 2015-11-13 | 公開日 | 2016-01-27 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (2.557 Å) | 主引用文献 | Crystal structure of the nucleosome containing histone H3 with crotonylated lysine 122 Biochem.Biophys.Res.Commun., 469, 2016
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4JWT
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7XZZ
| Cryo-EM structure of the nucleosome in complex with p53 | 分子名称: | Cellular tumor antigen p53, DNA (169-MER), Histone H2A type 1-B/E, ... | 著者 | Nishimura, M, Nozawa, K, Takizawa, Y, Kurumizaka, H. | 登録日 | 2022-06-03 | 公開日 | 2022-10-12 | 最終更新日 | 2024-07-03 | 実験手法 | ELECTRON MICROSCOPY (4.07 Å) | 主引用文献 | Structural basis for p53 binding to its nucleosomal target DNA sequence. Pnas Nexus, 1, 2022
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