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1WRF
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Refined solution structure of Der f 2, The Major Mite Allergen from Dermatophagoides farinae
分子名称: Mite group 2 allergen Der f 2
著者Ichikawa, S, Takai, T, Inoue, T, Yuuki, T, Okumura, Y, Ogura, K, Inagaki, F, Hatanaka, H.
登録日2004-10-15
公開日2005-04-19
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献NMR Study on the Major Mite Allergen Der f 2: Its Refined Tertiary Structure, Epitopes for Monoclonal Antibodies and Characteristics Shared by ML Protein Group Members
J.Biochem.(Tokyo), 137, 2005
8FMX
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Langya virus F glycoprotein ectodomain in prefusion form
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Low, Y.S, Isaacs, A, Modhiran, N, Watterson, D.
登録日2022-12-26
公開日2023-06-28
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Structure and antigenicity of divergent Henipavirus fusion glycoproteins.
Nat Commun, 14, 2023
8FMY
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Mojiang virus F ectodomain in prefusion form
分子名称: Fusion glycoprotein F0
著者Low, Y.S, Isaacs, A, Modhiran, N, Watterson, D.
登録日2022-12-26
公開日2023-06-28
実験手法ELECTRON MICROSCOPY (2.66 Å)
主引用文献Structure and antigenicity of divergent Henipavirus fusion glycoproteins.
Nat Commun, 14, 2023
7C28
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Unusual quaternary structure of a homodimeric synergistic toxin from mamba snake venom
分子名称: SULFATE ION, Synergistic-type venom protein S2C4
著者Jobichen, C, Narumi, A, Sivaraman, J, Kini, R.M.
登録日2020-05-07
公開日2020-10-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Unusual quaternary structure of a homodimeric synergistic-type toxin from mamba snake venom defines its molecular evolution.
Biochem.J., 477, 2020
1R1Z
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The Crystal structure of the Carbohydrate recognition domain of the glycoprotein sorting receptor p58/ERGIC-53 reveals a novel metal binding site and conformational changes associated with calcium ion binding
分子名称: CALCIUM ION, ERGIC-53 protein
著者Velloso, L.M, Svensson, K, Pettersson, R.F, Lindqvist, Y.
登録日2003-09-25
公開日2003-12-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The Crystal Structure of the Carbohydrate-recognition Domain of the Glycoprotein Sorting Receptor p58/ERGIC-53 Reveals an Unpredicted Metal-binding Site and Conformational Changes Associated with Calcium Ion Binding.
J.Mol.Biol., 334, 2003
8IWF
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Aspergillus niger Rha-2 and pNPR
分子名称: (2S,3R,4R,5R,6S)-2-methyl-6-[4-[oxidanyl(oxidanylidene)-$l^4-azanyl]phenoxy]oxane-3,4,5-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Li, L.J, Li, L, Wang, M.H, Jiang, Z.D, Zhu, Y.B, Jin, T.C, Ni, H.
登録日2023-03-29
公開日2024-04-03
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Crystal structure and catalytic function of alpha-L-rhamnosidase from Aspergillus niger
To Be Published
8IWD
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Aspergillus niger Rha-2
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Li, L.J, Li, L, Wang, M.H, Jiang, Z.D, Zhu, Y.B, Jin, T.C, Ni, H.
登録日2023-03-29
公開日2024-04-03
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Crystal structure and catalytic function of alpha-L-rhamnosidase from Aspergillus niger
To Be Published
7DH5
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Dog beta3 adrenergic receptor bound to mirabegron in complex with a miniGs heterotrimer
分子名称: 2-(2-azanyl-1,3-thiazol-4-yl)-N-[4-[2-[[(2R)-2-oxidanyl-2-phenyl-ethyl]amino]ethyl]phenyl]ethanamide, Beta-3 adrenergic receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Shihoya, W, Yamashita, K, Nureki, O.
登録日2020-11-12
公開日2021-08-04
最終更新日2021-08-18
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Cryo-EM structure of the beta 3-adrenergic receptor reveals the molecular basis of subtype selectivity.
Mol.Cell, 81, 2021
1SBC
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THE REFINED CRYSTAL STRUCTURE OF SUBTILISIN CARLSBERG AT 2.5 ANGSTROMS RESOLUTION
分子名称: CALCIUM ION, SUBTILISIN CARLSBERG
著者Neidhart, D.J, Petsko, G.A.
登録日1988-05-13
公開日1988-07-16
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The refined crystal structure of subtilisin Carlsberg at 2.5 A resolution.
Protein Eng., 2, 1988
1FSK
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COMPLEX FORMATION BETWEEN A FAB FRAGMENT OF A MONOCLONAL IGG ANTIBODY AND THE MAJOR ALLERGEN FROM BIRCH POLLEN BET V 1
分子名称: ANTIBODY HEAVY CHAIN FAB, IMMUNOGLOBULIN KAPPA LIGHT CHAIN, MAJOR POLLEN ALLERGEN BET V 1-A
著者Mirza, O, Henriksen, A, Ipsen, H, Larsen, J, Wissenbach, M, Spangfort, M, Gajhede, M.
登録日2000-09-11
公開日2000-10-02
最終更新日2018-03-07
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Dominant epitopes and allergic cross-reactivity: complex formation between a Fab fragment of a monoclonal murine IgG antibody and the major allergen from birch pollen Bet v 1.
J.Immunol., 165, 2000
3VSB
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SUBTILISIN CARLSBERG D-NAPHTHYL-1-ACETAMIDO BORONIC ACID INHIBITOR COMPLEX
分子名称: SODIUM ION, SUBTILISIN CARLSBERG, TYPE VIII
著者Stoll, V.S, Eger, B.T, Hynes, R.C, Martichonok, V, Jones, J.B, Pai, E.F.
登録日1997-09-25
公開日1998-03-25
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Differences in binding modes of enantiomers of 1-acetamido boronic acid based protease inhibitors: crystal structures of gamma-chymotrypsin and subtilisin Carlsberg complexes.
Biochemistry, 37, 1998
6SF5
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Mn-containing form of the ribonucleotide reductase NrdB protein from Leeuwenhoekiella blandensis
分子名称: MANGANESE (II) ION, Ribonucleoside-diphosphate reductase, beta subunit 1
著者Hasan, M, Rozman Grinberg, I, Sjoberg, B.M, Logan, D.T.
登録日2019-08-01
公開日2019-08-28
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Class Id ribonucleotide reductase utilizes a Mn2(IV,III) cofactor and undergoes large conformational changes on metal loading.
J.Biol.Inorg.Chem., 24, 2019
6SF4
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Apo form of the ribonucleotide reductase NrdB protein from Leeuwenhoekiella blandensis
分子名称: Ribonucleoside-diphosphate reductase, beta subunit 1
著者Hasan, M, Rozman Grinberg, I, Sjoberg, B.M, Logan, D.T.
登録日2019-07-31
公開日2019-08-28
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Class Id ribonucleotide reductase utilizes a Mn2(IV,III) cofactor and undergoes large conformational changes on metal loading.
J.Biol.Inorg.Chem., 24, 2019
3ZPR
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BU of 3zpr by Molmil
Thermostabilised turkey beta1 adrenergic receptor with 4-methyl-2-(piperazin-1-yl) quinoline bound
分子名称: 4-METHYL-2-(PIPERAZIN-1-YL) QUINOLINE, BETA-1 ADRENERGIC RECEPTOR, CHOLESTEROL HEMISUCCINATE, ...
著者Christopher, J.A, Congreve, M, Dore, A.S, Marshall, F.H, Myszka, D.G, Brown, J, Koglin, M, Tehan, B, Errey, J.C, Tate, C.G, Warne, T.
登録日2013-03-01
公開日2013-04-03
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Biophysical Fragment Screening of the Beta1-Adrenergic Receptor: Identification of High Affinity Aryl Piperazine Leads Using Structure-Based Drug Design.
J.Med.Chem., 56, 2013
3ZPQ
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Thermostabilised turkey beta1 adrenergic receptor with 4-(piperazin-1- yl)-1H-indole bound (compound 19)
分子名称: 4-(PIPERAZIN-1-YL)-1H-INDOLE, BETA-1 ADRENERGIC RECEPTOR, CHOLESTEROL HEMISUCCINATE, ...
著者Christopher, J.A, Congreve, M, Dore, A.S, Marshall, F.H, Myszka, D.G, Brown, J, Koglin, M, Tehan, B, Errey, J.C, Tate, C.G, Warne, T.
登録日2013-03-01
公開日2013-04-03
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Biophysical Fragment Screening of the Beta1-Adrenergic Receptor: Identification of High Affinity Aryl Piperazine Leads Using Structure-Based Drug Design.
J.Med.Chem., 56, 2013
6Q3R
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ASPERGILLUS ACULEATUS GALACTANASE
分子名称: 1,2-ETHANEDIOL, 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, ACETATE ION, ...
著者Muderspach, S.J, Torpenholt, S, Lo Leggio, L, Poulsen, J.C.N.
登録日2018-12-04
公開日2019-06-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Structure of Aspergillus aculeatus beta-1,4-galactanase in complex with galactobiose.
Acta Crystallogr.,Sect.F, 75, 2019
1YU6
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Crystal Structure of the Subtilisin Carlsberg:OMTKY3 Complex
分子名称: CALCIUM ION, Ovomucoid, Subtilisin Carlsberg
著者Maynes, J.T, Cherney, M.M, Qasim, M.A, Laskowski Jr, M, James, M.N.G.
登録日2005-02-11
公開日2005-05-03
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structure of the subtilisin Carlsberg-OMTKY3 complex reveals two different ovomucoid conformations.
Acta Crystallogr.,Sect.D, 61, 2005
3NY9
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Crystal structure of the human beta2 adrenergic receptor in complex with a novel inverse agonist
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Beta-2 adrenergic receptor, Lysozyme, ...
著者Fenalti, G, Wacker, D, Brown, M.A, Katritch, V, Abagyan, R, Cherezov, V, Stevens, R.C, Accelerated Technologies Center for Gene to 3D Structure (ATCG3D), GPCR Network (GPCR)
登録日2010-07-14
公開日2010-08-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Conserved Binding Mode of Human beta(2) Adrenergic Receptor Inverse Agonists and Antagonist Revealed by X-ray Crystallography
J.Am.Chem.Soc., 132, 2010
8FJ5
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Structure of the Haloferax volcanii archaeal type IV pilus
分子名称: Pilin_N domain-containing protein
著者Wang, F, Kreutzberger, M.A, Baquero, D.P, Krupovic, M, Egelman, E.H.
登録日2022-12-19
公開日2023-06-28
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献The evolution of archaeal flagellar filaments.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FK7
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Structure of the Pyrobaculum calidifontis flagellar-like archaeal type IV pilus
分子名称: Flagellin
著者Wang, F, Kreutzberger, M.A, Cvirkaite-Krupovic, V, Krupovic, M, Egelman, E.H.
登録日2022-12-20
公開日2023-06-28
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献The evolution of archaeal flagellar filaments.
Proc.Natl.Acad.Sci.USA, 120, 2023
3MQ1
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Crystal Structure of Dust Mite Allergen Der p 5
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, Mite allergen Der p 5, ...
著者Mueller, G.A, Gosavi, R.A, Krahn, J.M, Edwards, L.L, Cuneo, M.J, Glesner, J, Pomes, A, Chapman, M.D, London, R.E, Pedersen, L.C.
登録日2010-04-27
公開日2010-06-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Der p 5 crystal structure provides insight into the group 5 dust mite allergens.
J.Biol.Chem., 285, 2010
6ARE
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Aspergillus fumigatus Cytosolic Thiolase in complex with two tetrahedral reaction intermediates and ammonium ions
分子名称: ACETATE ION, ACETYL COENZYME *A, AMMONIUM ION, ...
著者Marshall, A.C, Bond, C.S, Bruning, J.B.
登録日2017-08-22
公開日2018-05-30
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure of Aspergillus fumigatus Cytosolic Thiolase: Trapped Tetrahedral Reaction Intermediates and Activation by Monovalent Cations
Acs Catalysis, 8(3), 2018
6ARL
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Aspergillus fumigatus Cytosolic Thiolase: Apo enzyme in complex with rubidium ions
分子名称: Acetyl-CoA acetyltransferase, CHLORIDE ION, GLYCEROL, ...
著者Marshall, A.C, Bond, C.S, Bruning, J.B.
登録日2017-08-22
公開日2018-05-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of Aspergillus fumigatus Cytosolic Thiolase: Trapped Tetrahedral Reaction Intermediates and Activation by Monovalent Cations
Acs Catalysis, 8(3), 2018
6HMX
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RIP2 Kinase Catalytic Domain complex with N(4,5dimethyl1Hpyrazol3yl)7methoxy6(2methylpropane2sulfonyl)quinolin4amine
分子名称: 6-~{tert}-butylsulfonyl-~{N}-(3,4-dimethyl-1~{H}-pyrazol-5-yl)-7-methoxy-quinolin-4-amine, Receptor-interacting serine/threonine-protein kinase 2
著者Convery, M.A, Haile, P.A.
登録日2018-09-13
公開日2018-11-07
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Identification of Quinoline-Based RIP2 Kinase Inhibitors with an Improved Therapeutic Index to the hERG Ion Channel.
ACS Med Chem Lett, 9, 2018
6FNT
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Ergothioneine-biosynthetic methyltransferase EgtD in complex with pyrrolidinohistidine
分子名称: Histidine N-alpha-methyltransferase, Pyrrolidinohistidine
著者Vit, A, Blankenfeldt, W, Seebeck, F.P.
登録日2018-02-05
公開日2018-06-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Inhibition and Regulation of the Ergothioneine Biosynthetic Methyltransferase EgtD.
ACS Chem. Biol., 13, 2018

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