PDB: 2596 件ウェブページステータス検索Chemie searchBIRD

---

4V66	Structure of the E. coli ribosome and the tRNAs in Post-accommodation state 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Devkota, B, Caulfield, T.R, Tan, R.-Z, Harvey, S.C. 登録日 2008-08-03 公開日 2014-07-09 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (9 Å) 主引用文献 The Structure of the E. coli Ribosome Before and After Accommodation: Implications for Proofreading To be Published
1VTR	STRUCTURE OF THE DEOXYTETRANUCLEOTIDE D-PAPTPAPT AND A SEQUENCE-DEPENDENT MODEL FOR POLY(DA-DT) 分子名称: DNA (5'-D(*AP*TP*AP*T)-3') 著者 Viswamitra, M.A, Shakked, Z, Jones, P.G, Sheldrick, G.M, Salisbury, S.A, Kennard, O. 登録日 1988-08-18 公開日 2011-07-13 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.04 Å) 主引用文献 Structure of the Deoxytetranucleotide d-pApTpApT and a Sequence-Dependent Model for Poly(dA-dT) Biopolymers, 21, 1982
8Q9P	Crystal Structure of the MADS-box/MEF2 Domain of MEF2D bound to dsDNA and HDAC5 deacetylase binding motif 分子名称: HDAC5 (histone deacetylase 5) binding motif peptide: TRP-GLY-SER-GLY-GLU-VAL-LYS-LEU-ARG-LEU-GLN-GLU-PHE-LEU-LEU-SER-LYS-SER, MADS box dsDNA fw: AACTATTTATAAGA, MADS box dsNA rev:TCTTATAAATAGTT, ... 著者 Chinellato, M, Carli, A, Perin, S, Mazzocato, Y, Biondi, B, Di Giorgio, E, Brancolini, C, Angelini, A, Cendron, L. 登録日 2023-08-20 公開日 2024-04-17 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Folding of Class IIa HDAC Derived Peptides into alpha-helices Upon Binding to Myocyte Enhancer Factor-2 in Complex with DNA. J.Mol.Biol., 436, 2024
8Q9Q	Crystal Structure of the MADS-box/MEF2 Domain of MEF2D bound to dsDNA and HDAC7 deacetylase binding motif 分子名称: HDAC7 (histone deacetylase 7) binding motif peptide: GLY-VAL-VAL-LYS-GLN-LYS-LEU-ALA-GLU-VAL-ILE-LEU-LYS-LYS-GLN, MADS box dsDNA: AACTATTTATAAGA, MADS box dsDNA: TCTTATAAATAGTT, ... 著者 Chinellato, M, Carli, A, Perin, S, Mazzocato, Y, Biondi, B, Di Giorgio, E, Brancolini, C, Angelini, A, Cendron, L. 登録日 2023-08-20 公開日 2024-04-17 実験手法 X-RAY DIFFRACTION (2.11 Å) 主引用文献 Folding of Class IIa HDAC Derived Peptides into alpha-helices Upon Binding to Myocyte Enhancer Factor-2 in Complex with DNA. J.Mol.Biol., 436, 2024
7TEC	Structure of the Listeria monocytogenes GlnR-DNA complex to 3.45 Angstrom 分子名称: DNA (5'-D(*CP*GP*TP*GP*TP*CP*AP*GP*AP*TP*AP*AP*TP*CP*TP*GP*AP*CP*AP*CP*G)-3'), HTH-type transcriptional regulator GlnR 著者 Schumacher, M.A, Brennan, R.G. 登録日 2022-01-04 公開日 2022-06-29 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.45 Å) 主引用文献 Molecular dissection of the glutamine synthetase-GlnR nitrogen regulatory circuitry in Gram-positive bacteria. Nat Commun, 13, 2022
6GTO	Structure of the AtaR antitoxin 分子名称: DUF1778 domain-containing protein, SODIUM ION 著者 Garcia-Pino, A, Jurenas, D. 登録日 2018-06-18 公開日 2019-03-06 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (2.97 Å) 主引用文献 Mechanism of regulation and neutralization of the AtaR-AtaT toxin-antitoxin system. Nat. Chem. Biol., 15, 2019
6GTS	Structure of the AtaT-AtaR complex bound DNA 分子名称: Acetyltransferase, DNA, DUF1778 domain-containing protein 著者 Garcia-Pino, A, Jurenas, D. 登録日 2018-06-19 公開日 2019-03-06 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (3.357 Å) 主引用文献 Mechanism of regulation and neutralization of the AtaR-AtaT toxin-antitoxin system. Nat. Chem. Biol., 15, 2019
6GTQ	Structure of the AtaT Y144F mutant toxin bound to the C-terminus of the antitoxin AtaR 分子名称: ACETATE ION, CHLORIDE ION, CITRATE ANION, ... 著者 Garcia-Pino, A, Jurenas, D. 登録日 2018-06-18 公開日 2019-03-06 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.49 Å) 主引用文献 Mechanism of regulation and neutralization of the AtaR-AtaT toxin-antitoxin system. Nat. Chem. Biol., 15, 2019
8BJV	Crystal structure of YopR 分子名称: GLYCEROL, SPbeta prophage-derived uncharacterized protein YopR 著者 Gallego del Sol, F, Marina, A. 登録日 2022-11-08 公開日 2023-11-22 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Characterization of a unique repression system present in arbitrium phages of the SPbeta family. Cell Host Microbe, 31, 2023
8BPZ	Crystal structure of YopR 分子名称: SPbeta prophage-derived uncharacterized protein YopR 著者 Gallego del Sol, F, Marina, A. 登録日 2022-11-18 公開日 2023-11-29 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Characterization of a unique repression system present in arbitrium phages of the SPbeta family. Cell Host Microbe, 31, 2023
6GTR	Structure of the AtaT Y144F mutant toxin bound to the C-terminus of the antitoxin AtaR and Acetyl-CoA 分子名称: ACETYL COENZYME *A, DUF1778 domain-containing protein, GLYCEROL, ... 著者 Garcia-Pino, A, Jurenas, D. 登録日 2018-06-18 公開日 2019-03-06 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.99 Å) 主引用文献 Mechanism of regulation and neutralization of the AtaR-AtaT toxin-antitoxin system. Nat. Chem. Biol., 15, 2019
6GTP	Structure of the AtaT Y144F mutant toxin 分子名称: ACETYL COENZYME *A, CHLORIDE ION, MAGNESIUM ION, ... 著者 Garcia-Pino, A, Jurenas, D. 登録日 2018-06-18 公開日 2019-03-06 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Mechanism of regulation and neutralization of the AtaR-AtaT toxin-antitoxin system. Nat. Chem. Biol., 15, 2019
7LZQ	Crystal structure of the BCL6 BTB domain in complex with OICR-4425 分子名称: B-cell lymphoma 6 protein, DIMETHYL SULFOXIDE, N-(3-chloropyridin-4-yl)-2-(5-methyl-4-oxo-4,5-dihydro-1H-pyrrolo[3,2-c]pyridin-1-yl)acetamide 著者 Kuntz, D.A, Prive, G.G. 登録日 2021-03-10 公開日 2022-08-17 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.71 Å) 主引用文献 Discovery of OICR12694: A Novel, Potent, Selective, and Orally Bioavailable BCL6 BTB Inhibitor. Acs Med.Chem.Lett., 14, 2023
9ATK	BIFUNCTIONAL INHIBITION OF NEUTROPHIL ELASTASE AND CATHEPSIN G by Eap4 of S. aureus 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Cathepsin-G, ... 著者 Mishra, N.B, Herdendorf, T.J, Geisbrecht, B.V. 登録日 2024-02-27 公開日 2024-06-12 実験手法 X-RAY DIFFRACTION (2.11 Å) 主引用文献 Bifunctional Inhibition of Neutrophil Elastase and Cathepsin-G by Eap4 from S. aureus To Be Published
9ASS	Crystal Structure of Neutrophil Elastase Inhibited by Eap4 from S. aureus 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Extracellular Adherence Protein, Neutrophil elastase, ... 著者 Mishra, N.B, Geisbrecht, B.V. 登録日 2024-02-26 公開日 2024-06-12 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Bifunctional Inhibition of Neutrophil Elastase and Cathepsin-G by Eap4 from S. aureus To Be Published
9ASX	BIFUNCTIONAL INHIBITION OF NEUTROPHIL ELASTASE AND CATHEPSIN G by Eap3 of S. aureus 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Cathepsin-G, ... 著者 Mishra, N.B, Herdendorf, T.J, Geisbrecht, B.V. 登録日 2024-02-26 公開日 2024-06-12 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Bifunctional Inhibition of Neutrophil Elastase and Cathepsin-G by Eap4 from S. aureus To Be Published
9ATU	Bifunctional Inhibition of Neutrophil Elastase by Eap4 from S. aureus 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Extracellular Adherence Protein, Neutrophil elastase, ... 著者 Mishra, N.B, Herdendorf, T.J, Geisbrecht, B.V. 登録日 2024-02-27 公開日 2024-06-12 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Bifunctional Inhibition of Neutrophil Elastase by Eap4 from S. aureus To Be Published
2W1T	Crystal Structure of B. subtilis SpoVT 分子名称: STAGE V SPORULATION PROTEIN T 著者 Asen, I, Djuranovic, S, Lupas, A.N, Zeth, K. 登録日 2008-10-20 公開日 2008-11-18 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal Structure of Spovt, the Final Modulator of Gene Expression During Spore Development in Bacillus Subtilis J.Mol.Biol., 386, 2009
7XL9	The structure of HucR with urate 分子名称: CHLORIDE ION, Transcriptional regulator, MarR family, ... 著者 Park, S.Y. 登録日 2022-04-21 公開日 2022-07-13 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.58 Å) 主引用文献 The structure of Deinococcus radiodurans transcriptional regulator HucR retold with the urate bound. Biochem.Biophys.Res.Commun., 615, 2022
3EWF	Crystal Structure Analysis of human HDAC8 H143A variant complexed with substrate. 分子名称: 7-AMINO-4-METHYL-CHROMEN-2-ONE, Histone deacetylase 8, PEPTIDIC SUBSTRATE, ... 著者 Dowling, D.P, Gantt, S.L, Gattis, S.G, Fierke, C.A, Christianson, D.W. 登録日 2008-10-14 公開日 2008-12-30 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural studies of human histone deacetylase 8 and its site-specific variants complexed with substrate and inhibitors. Biochemistry, 47, 2008
3F06	Crystal Structure Analysis of Human HDAC8 D101A Variant. 分子名称: 4-(dimethylamino)-N-[7-(hydroxyamino)-7-oxoheptyl]benzamide, BETA-MERCAPTOETHANOL, Histone deacetylase 8, ... 著者 Dowling, D.P, Gantt, S.L, Gattis, S.G, Fierke, C.A, Christianson, D.W. 登録日 2008-10-24 公開日 2008-12-30 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Structural studies of human histone deacetylase 8 and its site-specific variants complexed with substrate and inhibitors. Biochemistry, 47, 2008
7B22	Vibrio cholerae ParD2 Antitoxin 分子名称: Antitoxin ParD 著者 Garcia-Rodriguez, G, Loris, R. 登録日 2020-11-25 公開日 2021-10-06 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3.08 Å) 主引用文献 Entropic pressure controls the oligomerization of the Vibrio cholerae ParD2 antitoxin. Acta Crystallogr D Struct Biol, 77, 2021
7Y7F	Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC) 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T. 登録日 2022-06-22 公開日 2023-10-25 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (2.43 Å) 主引用文献 Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth. Cell, 186, 2023
7Y7E	Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU) 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T. 登録日 2022-06-22 公開日 2023-10-25 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (2.41 Å) 主引用文献 Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth. Cell, 186, 2023
7Y7D	Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU) 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T. 登録日 2022-06-22 公開日 2023-10-25 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (2.58 Å) 主引用文献 Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth. Cell, 186, 2023

<28293031323334353637383940414243>