PDB: 1544 件ウェブページステータス検索Chemie searchBIRD

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8ST7	Structure of E3 ligase VsHECT bound to ubiquitin 分子名称: E3 ubiquitin-protein ligase SopA-like catalytic domain-containing protein, Ubiquitin, prop-2-en-1-amine 著者 Franklin, T.G, Pruneda, J.N. 登録日 2023-05-09 公開日 2023-07-12 最終更新日 2024-01-03 実験手法 X-RAY DIFFRACTION (1.44 Å) 主引用文献 Bacterial ligases reveal fundamental principles of polyubiquitin specificity. Mol.Cell, 83, 2023
8ST9	Structure of E3 ligase NleL bound to ubiquitin 分子名称: E3 ubiquitin-protein ligase SopA, Ubiquitin, prop-2-en-1-amine 著者 Franklin, T.G, Pruneda, J.N. 登録日 2023-05-09 公開日 2023-07-12 最終更新日 2024-01-03 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Bacterial ligases reveal fundamental principles of polyubiquitin specificity. Mol.Cell, 83, 2023
8ST8	Structure of E3 ligase SopA bound to ubiquitin 分子名称: E3 ubiquitin-protein ligase SopA, Ubiquitin, prop-2-en-1-amine 著者 Franklin, T.G, Pruneda, J.N. 登録日 2023-05-09 公開日 2023-07-12 最終更新日 2024-01-03 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Bacterial ligases reveal fundamental principles of polyubiquitin specificity. Mol.Cell, 83, 2023
2KWV	Solution Structure of UBM1 of murine Polymerase iota in Complex with Ubiquitin 分子名称: DNA polymerase iota, Ubiquitin 著者 Burschowsky, D, Rudolf, F, Rabut, G, Herrmann, T, Peter, M, Wider, G. 登録日 2010-04-20 公開日 2010-10-06 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural analysis of the conserved ubiquitin-binding motifs (UBMs) of the translesion polymerase iota in complex with ubiquitin. J.Biol.Chem., 286, 2011
2KWU	Solution Structure of UBM2 of murine Polymerase iota in Complex with Ubiquitin 分子名称: DNA polymerase iota, Ubiquitin 著者 Burschowsky, D, Rudolf, F, Rabut, G, Herrmann, T, Peter, M, Wider, G. 登録日 2010-04-19 公開日 2010-10-06 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural analysis of the conserved ubiquitin-binding motifs (UBMs) of the translesion polymerase iota in complex with ubiquitin. J.Biol.Chem., 286, 2011
2L0T	Solution structure of the complex of ubiquitin and the VHS domain of Stam2 分子名称: Signal transducing adapter molecule 2, Ubiquitin 著者 Lange, A, Hoeller, D, Wienk, H, Marcillat, O, Lancelin, J, Walker, O. 登録日 2010-07-15 公開日 2010-12-15 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 NMR reveals a different mode of binding of the Stam2 VHS domain to ubiquitin and diubiquitin. Biochemistry, 50, 2011
2LVO	Structure of the gp78CUE domain bound to monubiquitin 分子名称: E3 ubiquitin-protein ligase AMFR, Ubiquitin 著者 Liu, S, Chen, Y, Huang, T, Tarasov, S.G, King, A, Li, J, Weissman, A.M, Byrd, R.A, Das, R. 登録日 2012-07-09 公開日 2012-11-21 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Promiscuous Interactions of gp78 E3 Ligase CUE Domain with Polyubiquitin Chains. Structure, 20, 2012
2LVP	gp78CUE domain bound to the distal ubiquitin of K48-linked diubiquitin 分子名称: E3 ubiquitin-protein ligase AMFR, Ubiquitin 著者 Liu, S, Chen, Y, Huang, T, Tarasov, S.G, King, A, Li, J, Weissman, A.M, Byrd, R.A, Das, R. 登録日 2012-07-09 公開日 2012-11-21 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Promiscuous Interactions of gp78 E3 Ligase CUE Domain with Polyubiquitin Chains. Structure, 20, 2012
2JRI	Solution structure of the Josephin domain of Ataxin-3 in complex with ubiquitin molecule. 分子名称: Ataxin-3, UBC protein 著者 Nicastro, G, Masino, L, Esposito, V, Menon, R, Pastore, A. 登録日 2007-06-27 公開日 2008-07-01 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Understanding the plasticity of the ubiquitin-protein recognition code: the josephin domain of ataxin-3 is a diubiquitin binding motif To be Published
2MBB	Solution Structure of the human Polymerase iota UBM1-Ubiquitin Complex 分子名称: Immunoglobulin G-binding protein G/DNA polymerase iota fusion protein, Polyubiquitin-B 著者 Wang, S, Zhou, P. 登録日 2013-07-29 公開日 2014-06-04 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Sparsely-sampled, high-resolution 4-D omit spectra for detection and assignment of intermolecular NOEs of protein complexes. J.Biomol.Nmr, 59, 2014
2MBH	NMR structure of EKLF(22-40)/Ubiquitin Complex 分子名称: Krueppel-like factor 1, Ubiquitin 著者 Raiola, L, Omichinski, J.G. 登録日 2013-07-31 公開日 2013-10-09 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural Characterization of a Noncovalent Complex between Ubiquitin and the Transactivation Domain of the Erythroid-Specific Factor EKLF. Structure, 21, 2013
2MCN	Distinct ubiquitin binding modes exhibited by SH3 domains: molecular determinants and functional implications 分子名称: CD2-associated protein, Ubiquitin 著者 Ortega-Roldan, J, Salmon, L, Azuaga, A, Blackledge, M, Van Nuland, N. 登録日 2013-08-22 公開日 2014-02-05 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Distinct ubiquitin binding modes exhibited by SH3 domains: molecular determinants and functional implications. Plos One, 8, 2013
2LVQ	gp78CUE domain bound to the proximal ubiquitin of K48-linked diubiquitin 分子名称: E3 ubiquitin-protein ligase AMFR, Ubiquitin 著者 Liu, S, Chen, Y, Huang, T, Tarasov, S.G, King, A, Li, J, Weissman, A.M, Byrd, R.A, Das, R. 登録日 2012-07-09 公開日 2012-11-21 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Promiscuous Interactions of gp78 E3 Ligase CUE Domain with Polyubiquitin Chains. Structure, 20, 2012
2JY6	Solution structure of the complex of ubiquitin and ubiquilin 1 UBA domain 分子名称: Ubiquilin-1, Ubiquitin protein 著者 Zhang, D, Raasi, S, Fushman, D. 登録日 2007-12-06 公開日 2008-03-18 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Affinity makes the difference: nonselective interaction of the UBA domain of Ubiquilin-1 with monomeric ubiquitin and polyubiquitin chains J.Mol.Biol., 377, 2008
2N3W	Solution structure of the Rpn1 T1 site with K48-linked diubiquitin in the contracted binding mode 分子名称: 26S proteasome regulatory subunit RPN1, Ubiquitin-60S ribosomal protein L40 著者 Chen, X, Walters, K.J. 登録日 2015-06-10 公開日 2016-02-24 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome. Science, 351, 2016
2L00	Solution structure of the non-covalent complex of the ZNF216 A20 domain with ubiquitin 分子名称: Ubiquitin, ZINC ION, Zfand5 protein (Zinc finger protein 216 (Predicted), ... 著者 Garner, T.P, Long, J.E, Searle, M.S, Layfield, R. 登録日 2010-06-29 公開日 2011-07-20 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Co-localisation of ubiquitin receptors ZNF216 and p62 in a ubiquitin-mediated ternary complex To be Published
2L0F	Solution NMR structure of human polymerase iota UBM2 (P692A mutant) in complex with ubiquitin 分子名称: DNA polymerase iota, Ubiquitin 著者 Cui, G, Benirschke, R, Mer, G. 登録日 2010-07-01 公開日 2010-11-03 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural Basis of Ubiquitin Recognition by Translesion Synthesis DNA Polymerase iota. Biochemistry, 49, 2010
2N3V	Solution structure of the Rpn1 T1 site with K48-linked diubiquitin in the extended binding mode 分子名称: 26S proteasome regulatory subunit RPN1, Ubiquitin-60S ribosomal protein L40 著者 Chen, X, Walters, K.J. 登録日 2015-06-10 公開日 2016-02-24 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome. Science, 351, 2016
2MRO	Structure of the complex of ubiquitin and the UBA domain from DNA-damage-inducible 1 protein (Ddi1) 分子名称: DNA damage-inducible protein 1, Polyubiquitin-B 著者 Zhang, D, Fushman, D. 登録日 2014-07-14 公開日 2015-02-04 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 DNA-Damage-Inducible 1 Protein (Ddi1) Contains an Uncharacteristic Ubiquitin-like Domain that Binds Ubiquitin. Structure, 23, 2015
2MUR	Solution Structure of the Human FAAP20 UBZ-Ubiquitin Complex 分子名称: Fanconi anemia-associated protein of 20 kDa, Ubiquitin, ZINC ION 著者 Wang, S, Wojtaszek, J.L, Zhou, P. 登録日 2014-09-16 公開日 2014-12-03 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Ubiquitin recognition by FAAP20 expands the complex interface beyond the canonical UBZ domain. Nucleic Acids Res., 42, 2014
2JZ3	SOCS box elonginBC ternary complex 分子名称: Suppressor of cytokine signaling 3, Transcription elongation factor B polypeptide 1, Transcription elongation factor B polypeptide 2 著者 Babon, J.J, Sabo, J, Soetopo, A, Yao, S, Bailey, M.F, Zhang, J, Nicola, N.A, Norton, R.S. 登録日 2007-12-27 公開日 2008-09-23 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 The SOCS box domain of SOCS3: structure and interaction with the elonginBC-cullin5 ubiquitin ligase J.Mol.Biol., 381, 2008
2NBW	Solution structure of the Rpn1 T1 site with the Rad23 UBL domain 分子名称: 26S proteasome regulatory subunit RPN1, UV excision repair protein RAD23 著者 Chen, X, Walters, K.J. 登録日 2016-03-14 公開日 2016-07-20 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structures of Rpn1 T1:Rad23 and hRpn13:hPLIC2 Reveal Distinct Binding Mechanisms between Substrate Receptors and Shuttle Factors of the Proteasome. Structure, 24, 2016
2NBV	Solution structure of the Rpn13 Pru domain engaging the hPLIC2 UBL domain 分子名称: Proteasomal ubiquitin receptor ADRM1, Ubiquilin-2 著者 Chen, X, Walters, K.J. 登録日 2016-03-12 公開日 2016-07-20 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structures of Rpn1 T1:Rad23 and hRpn13:hPLIC2 Reveal Distinct Binding Mechanisms between Substrate Receptors and Shuttle Factors of the Proteasome. Structure, 24, 2016
2KDE	NMR structure of major S5a (196-306):K48 linked diubiquitin species 分子名称: 26S proteasome non-ATPase regulatory subunit 4, Ubiquitin 著者 Zhang, N, Wang, Q, Ehlinger, A, Randles, L, Lary, J.W, Kang, Y, Haririnia, A, Cole, J.L, Fushman, D, Walters, K.J. 登録日 2009-01-06 公開日 2009-09-01 最終更新日 2022-03-16 実験手法 SOLUTION NMR 主引用文献 Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13. Mol.Cell, 35, 2009
2KHW	Solution Structure of the human Polymerase iota UBM2-Ubiquitin Complex 分子名称: Immunoglobulin G-binding protein G, DNA polymerase iota, Ubiquitin 著者 Bomar, M.G, D'Souza, S, Bienko, M, Dikic, I, Walker, G. 登録日 2009-04-13 公開日 2010-02-23 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution Structure of the human Polymerase iota UBM2-Ubiquitin Complex To be Published

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