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6D6E
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Triclinic lysozyme (295 K) in the presence of 47% xylose
分子名称: Lysozyme C, NITRATE ION
著者Juers, D.H.
登録日2018-04-20
公開日2018-09-19
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
6D6F
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Triclinic lysozyme cryocooled to 100 K with 47% xylose as cryoprotectant
分子名称: Lysozyme C, NITRATE ION, alpha-D-xylopyranose
著者Juers, D.H.
登録日2018-04-20
公開日2018-09-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
1NYJ
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The closed state structure of M2 protein H+ channel by solid state NMR spectroscopy
分子名称: Matrix protein M2
著者Nishimura, K, Kim, S, Zhang, L, Cross, T.A.
登録日2003-02-12
公開日2003-03-25
最終更新日2024-05-22
実験手法SOLID-STATE NMR
主引用文献The closed state of a H+ channel helical bundle combining precise orientational and distance restraints from solid state NMR
Biochemistry, 41, 2002
6D6G
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Triclinic lysozyme (295 K) in the presence of 47% MPD
分子名称: Lysozyme C, NITRATE ION
著者Juers, D.H.
登録日2018-04-20
公開日2018-09-19
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
5J0M
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BU of 5j0m by Molmil
Ground state sampled during RDC restrained Replica-averaged Metadynamics (RAM) simulations of the HIV-1 TAR complexed with cyclic peptide mimetic of Tat
分子名称: Apical region (29-mer) of the HIV-1 TAR RNA element, Cyclic peptide mimetic of HIV-1 Tat
著者Borkar, A.N, Bardaro Jr, M.F, Varani, G, Vendruscolo, M.
登録日2016-03-28
公開日2016-06-08
最終更新日2019-10-23
実験手法SOLUTION NMR
主引用文献Structure of a low-population binding intermediate in protein-RNA recognition.
Proc.Natl.Acad.Sci.USA, 113, 2016
8Q92
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P301S Tau Filaments from the Brains of PS19 Transgenic Mouse Line
分子名称: Microtubule-associated protein tau
著者Schweighauser, M, Murzin, A.G, Macdonald, J, Lavenir, I, Crowther, R.A, Scheres, S.H.W, Goedert, M.
登録日2023-08-19
公開日2023-10-11
最終更新日2023-10-18
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Cryo-EM structures of tau filaments from the brains of mice transgenic for human mutant P301S Tau.
Acta Neuropathol Commun, 11, 2023
6T22
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BU of 6t22 by Molmil
N-terminal domain of EcoKMcrA restriction endonuclease (NEco) in complex with T5hmCGA target sequence
分子名称: DNA (5'-D(*GP*AP*AP*TP*(5HC)P*GP*AP*TP*GP*A)-3'), DNA (5'-D(*TP*CP*AP*TP*(5HC)P*GP*AP*TP*TP*C)-3'), EcoKMcrA modification dependent restriction endonuclease
著者Slyvka, A, Zagorskaite, E, Czapinska, H, Sasnauskas, G, Bochtler, M.
登録日2019-10-07
公開日2019-10-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Crystal structure of the EcoKMcrA N-terminal domain (NEco): recognition of modified cytosine bases without flipping.
Nucleic Acids Res., 47, 2019
5P2P
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X-RAY STRUCTURE OF PHOSPHOLIPASE A2 COMPLEXED WITH A SUBSTRATE-DERIVED INHIBITOR
分子名称: CALCIUM ION, PHOSPHOLIPASE A2, PHOSPHONIC ACID 2-DODECANOYLAMINO-HEXYL ESTER PROPYL ESTER
著者Dijkstra, B.W, Thunnissen, M.M.G.M, Kalk, K.H, Drenth, J.
登録日1990-09-01
公開日1991-10-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献X-ray structure of phospholipase A2 complexed with a substrate-derived inhibitor.
Nature, 347, 1990
6T21
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N-terminal domain of EcoKMcrA restriction endonuclease (NEco) in complex with T5mCGA target sequence
分子名称: 5-methylcytosine-specific restriction enzyme A, DNA (5'-D(*GP*AP*AP*TP*(5CM)P*GP*AP*TP*GP*A)-3'), DNA (5'-D(*TP*CP*AP*TP*(5CM)P*GP*AP*TP*TP*C)-3')
著者Slyvka, A, Zagorskaite, E, Czapinska, H, Sasnauskas, G, Bochtler, M.
登録日2019-10-07
公開日2019-10-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Crystal structure of the EcoKMcrA N-terminal domain (NEco): recognition of modified cytosine bases without flipping.
Nucleic Acids Res., 47, 2019
1NQP
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Crystal structure of Human hemoglobin E at 1.73 A resolution
分子名称: CYANIDE ION, Hemoglobin alpha chain, Hemoglobin beta chain, ...
著者Dasgupta, J, Sen, U, Choudhury, D, Dutta, P, Basu, S, Chakrabarti, A, Chakrabarty, A, Dattagupta, J.K.
登録日2003-01-22
公開日2004-03-02
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Crystallization and preliminary X-ray structural Studies of Hemoglobin A2 and Hemoglobin E, isolated from the blood samples of Beta-thalassemic patients
Biochem.Biophys.Res.Commun., 303, 2004
2J3V
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Crystal structure of the enzymatic component C2-I of the C2-toxin from Clostridium botulinum at pH 3.0
分子名称: C2 TOXIN COMPONENT I, GLYCEROL, SULFATE ION
著者Schleberger, C, Hochmann, H, Barth, H, Aktories, K, Schulz, G.E.
登録日2006-08-23
公開日2006-10-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Structure and Action of the Binary C2 Toxin from Clostridium Botulinum.
J.Mol.Biol., 364, 2006
5J1O
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BU of 5j1o by Molmil
Excited state (Bound-like) sampled during RDC restrained Replica-averaged Metadynamics (RAM) simulations of the HIV-1 TAR complexed with cyclic peptide mimetic of Tat
分子名称: Apical region (29mer) of the HIV-1 TAR element, Cyclic peptide mimetic of Tat
著者Borkar, A.N, Bardaro, M.F, Varani, G, Vendruscolo, M.
登録日2016-03-29
公開日2016-06-08
最終更新日2019-10-23
実験手法SOLUTION NMR
主引用文献Structure of a low-population binding intermediate in protein-RNA recognition.
Proc.Natl.Acad.Sci.USA, 113, 2016
7FC0
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BU of 7fc0 by Molmil
Reconstitution of MbnABC complex from Rugamonas rubra ATCC-43154 (GroupIII)
分子名称: FE (III) ION, Methanobactin biosynthesis cassette protein MbnB, Methanobactin biosynthesis cassette protein MbnC, ...
著者Chao, D, Zhaolin, L, Shoujie, L, Li, Z, Dan, Z, Ying, J, Wei, C.
登録日2021-07-13
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.643 Å)
主引用文献Crystal structure and catalytic mechanism of the MbnBC holoenzyme required for methanobactin biosynthesis.
Cell Res., 32, 2022
1NTF
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Crystal Structure of Cimex Nitrophorin
分子名称: PROTOPORPHYRIN IX CONTAINING FE, salivary nitrophorin
著者Weichsel, A, Maes, E.M, Andersen, J.F, Valenzuela, J.G, Walker, F.A, Montfort, W.R.
登録日2003-01-29
公開日2004-03-16
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Heme-assisted S-nitrosation of a proximal thiolate in a nitric oxide transport protein.
Proc.Natl.Acad.Sci.USA, 102, 2005
2IVD
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BU of 2ivd by Molmil
Structure of protoporphyrinogen oxidase from Myxococcus xanthus with acifluorfen
分子名称: (3S)-3-[(2S,3S,4R)-3,4-DIMETHYLTETRAHYDROFURAN-2-YL]BUTYL LAURATE, 5-[2-CHLORO-4-(TRIFLUOROMETHYL)PHENOXY]-2-NITROBENZOIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Corradi, H.R, Corrigall, A.V, Boix, E, Mohan, C.G, Sturrock, E.D, Meissner, P.N, Acharya, K.R.
登録日2006-06-12
公開日2006-10-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of Protoporphyrinogen Oxidase from Myxococcus Xanthus and its Complex with the Inhibitor Acifluorfen.
J.Biol.Chem., 281, 2006
8Q72
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E. coli plasmid-borne JetABCD(E248A) core in a cleavage-competent state
分子名称: ADENOSINE-5'-DIPHOSPHATE, Circular plasmid DNA (1840-MER), JetA, ...
著者Roisne-Hamelin, F, Li, Y, Gruber, S.
登録日2023-08-15
公開日2024-01-31
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.17 Å)
主引用文献Structural basis for plasmid restriction by SMC JET nuclease.
Mol.Cell, 84, 2024
6T5F
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Human 14-3-3 sigma fused to the StARD1 peptide including phosphoserine-195
分子名称: 14-3-3 protein sigma, StARD1 peptide
著者Sluchanko, N.N, Tugaeva, K.V, Titterington, J, Antson, A.A.
登録日2019-10-16
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Molecular basis for the recognition of steroidogenic acute regulatory protein by the 14-3-3 protein family.
Febs J., 287, 2020
8QFD
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UFL1 E3 ligase bound 60S ribosome
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Makhlouf, L, Kulathu, Y, Zeqiraj, E.
登録日2023-09-04
公開日2024-02-21
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献The UFM1 E3 ligase recognizes and releases 60S ribosomes from ER translocons.
Nature, 627, 2024
8R4Q
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Salt inducible kinase 3 in complex with inhibitor
分子名称: 4-[(2,4-dichloro-5-methoxyphenyl)amino]-6-methoxy-7-[3-(4-methylpiperazin-1-yl)propoxy]quinoline-3-carbonitrile, SULFATE ION, Serine/threonine-protein kinase SIK3, ...
著者Kack, H, Oster, L.
登録日2023-11-14
公開日2024-03-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.838 Å)
主引用文献The structures of salt-inducible kinase 3 in complex with inhibitors reveal determinants for binding and selectivity.
J.Biol.Chem., 300, 2024
8R4V
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Structure of Salt-inducible kinase 3 in complex with inhibitor
分子名称: 1-(2,4-dimethoxyphenyl)-3-(2,6-dimethylphenyl)-1-[6-[[4-(4-methylpiperazin-1-yl)phenyl]amino]pyrimidin-4-yl]urea, Serine/threonine-protein kinase SIK3
著者Kack, H, Oster, L.
登録日2023-11-14
公開日2024-03-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The structures of salt-inducible kinase 3 in complex with inhibitors reveal determinants for binding and selectivity.
J.Biol.Chem., 300, 2024
6DIK
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Crystal structure of Bothropstoxin I (BthTX-I) complexed to Chicoric acid
分子名称: (2R,3R)-2,3-bis{[(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy}butanedioic acid, BICARBONATE ION, Basic phospholipase A2 homolog bothropstoxin-1, ...
著者Cardoso, F.F, Salvador, G.H.M, Borges, R.J.
登録日2018-05-23
公開日2018-10-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structural basis of phospholipase A2-like myotoxin inhibition by chicoric acid, a novel potent inhibitor of ophidian toxins.
Biochim Biophys Acta Gen Subj, 1862, 2018
8R4U
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Structure of salt-inducible kinase 3 with inhibitors
分子名称: 8-[(5-azanyl-1,3-dioxan-2-yl)methyl]-6-[2-chloranyl-4-(3-fluoranylpyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one, SULFATE ION, Serine/threonine-protein kinase SIK3, ...
著者Kack, H, Oster, L.
登録日2023-11-14
公開日2024-03-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.416 Å)
主引用文献The structures of salt-inducible kinase 3 in complex with inhibitors reveal determinants for binding and selectivity.
J.Biol.Chem., 300, 2024
8R4O
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Salt inducible kinase 3 in complex with inhibitor
分子名称: 2-[bis(fluoranyl)methoxy]-4-[6-(2-cyanopropan-2-yl)pyrazolo[1,5-a]pyridin-3-yl]-~{N}-[(1~{R},2~{S})-2-fluoranylcyclopropyl]-6-methoxy-benzamide, SULFATE ION, Serine/threonine-protein kinase SIK3, ...
著者Kack, H, Oster, L.
登録日2023-11-14
公開日2024-03-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.725 Å)
主引用文献The structures of salt-inducible kinase 3 in complex with inhibitors reveal determinants for binding and selectivity.
J.Biol.Chem., 300, 2024
5M5R
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Clathrin heavy chain N-terminal domain bound to beta2 adaptin clathrin box motif
分子名称: AP-2 complex subunit beta, Clathrin heavy chain 1
著者Muenzner, J, Graham, S.C.
登録日2016-10-22
公開日2016-11-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Cellular and viral peptides bind multiple sites on the N-terminal domain of clathrin.
Traffic, 18, 2017
5J6T
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NMR structures of hylin-a1 analogs: Hylin-Ac
分子名称: Hylin-a1
著者Crusca Jr, E, Matos, C.O, Liao, L.M, Oliveira, A.L.
登録日2016-04-05
公開日2017-04-12
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献NMR structures and molecular dynamics simulation of hylin-a1 peptide analogs interacting with micelles.
J. Pept. Sci., 23, 2017

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