PDB: 97138 件ウェブページステータス検索Chemie searchBIRD

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2FZW	Structure of the binary complex of the E67L mutant of human glutathione-dependent formaldehyde dehydrogenase with NAD(H) 分子名称: Alcohol dehydrogenase class III chi chain, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PHOSPHATE ION, ... 著者 Sanghani, P.C, Robinson, H. 登録日 2006-02-10 公開日 2006-06-13 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Structure-function relationships in human glutathione-dependent formaldehyde dehydrogenase. Role of Glu-67 and Arg-368 in the catalytic mechanism. Biochemistry, 45, 2006
5YUS	DNA polymerase IV - DNA ternary complex 2 分子名称: DNA polymerase IV, DTN, MAGNESIUM ION, ... 著者 Kottur, J, Nair, D.T. 登録日 2017-11-23 公開日 2018-11-07 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction Nucleic Acids Res., 46, 2018
8J82	GaHNL-12gen (artificial S-hydroxynitrile lyase generated by GAOptimizer) 分子名称: S-hydroxynitrile lyase 著者 Ozawa, H, Unno, I, Sekine, R, Ito, S, Nakano, S. 登録日 2023-04-29 公開日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.69 Å) 主引用文献 Development of evolutionary algorithm-based protein redesign method Cell Rep Phys Sci, 5, 2024
2DNJ	DNASE I-INDUCED DNA CONFORMATION. 2 ANGSTROMS STRUCTURE OF A DNASE I-OCTAMER COMPLEX 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5'-D(*GP*CP*GP*AP*TP*C)-3', 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3', ... 著者 Lahm, A, Suck, D. 登録日 1986-10-21 公開日 1994-01-31 最終更新日 2020-10-21 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 DNase I-induced DNA conformation. 2 A structure of a DNase I-octamer complex J.Mol.Biol., 222, 1991
8G4M	Vaccine-elicited human antibody 2C06 in complex with HIV-1 envelope trimer BG505 DS-SOSIP 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ... 著者 Wang, S, Morano, N.C, Shapiro, L, Kwong, P.D. 登録日 2023-02-10 公開日 2023-07-12 最終更新日 2023-07-26 実験手法 ELECTRON MICROSCOPY (2.95 Å) 主引用文献 HIV-1 neutralizing antibodies elicited in humans by a prefusion-stabilized envelope trimer form a reproducible class targeting fusion peptide. Cell Rep, 42, 2023
8G4T	Vaccine-elicited human antibody 2C09 in complex with HIV-1 envelope trimer BG505 DS-SOSIP 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein BG505 DS-SOSIP gp120, ... 著者 Wang, S, Kwong, P.D. 登録日 2023-02-10 公開日 2023-07-12 最終更新日 2023-07-26 実験手法 ELECTRON MICROSCOPY (2.81 Å) 主引用文献 HIV-1 neutralizing antibodies elicited in humans by a prefusion-stabilized envelope trimer form a reproducible class targeting fusion peptide. Cell Rep, 42, 2023
5YV3	DNA polymerase IV - DNA ternary complex 7 分子名称: DIPHOSPHATE, DNA polymerase IV, DTN1, ... 著者 Kottur, J, Nair, D.T. 登録日 2017-11-23 公開日 2018-11-07 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction Nucleic Acids Res., 46, 2018
1BIO	HUMAN COMPLEMENT FACTOR D IN COMPLEX WITH ISATOIC ANHYDRIDE INHIBITOR 分子名称: COMPLEMENT FACTOR D, GLYCEROL, ISATOIC ANHYDRIDE 著者 Jing, H, Babu, Y.S, Moore, D, Kilpatrick, J.M, Liu, X.-Y, Volanakis, J.E, Narayana, S.V.L. 登録日 1998-06-18 公開日 1999-06-22 最終更新日 2023-08-02 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structures of native and complexed complement factor D: implications of the atypical His57 conformation and self-inhibitory loop in the regulation of specific serine protease activity. J.Mol.Biol., 282, 1998
5YUU	DNA polymerase IV - DNA ternary complex 4 分子名称: DNA polymerase IV, DTN1, DTN2, ... 著者 Kottur, J, Nair, D.T. 登録日 2017-11-23 公開日 2019-01-02 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.892 Å) 主引用文献 Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction Nucleic Acids Res., 46, 2018
6GBF	The Structure of variant R369A of the Mo-insertase domain Cnx1E from Arabidopsis thaliana in complex with AMP 分子名称: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE MONOPHOSPHATE, ... 著者 Krausze, J. 登録日 2018-04-13 公開日 2018-07-18 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.712 Å) 主引用文献 The functional principle of eukaryotic molybdenum insertases. Biochem. J., 475, 2018
8OJ9	Arabidopsis thaliana Phosphoenolpyruvate carboxylase PPC1 free form 分子名称: Phosphoenolpyruvate carboxylase 1 著者 Haesaerts, S, Loris, R, Larsen, P.B. 登録日 2023-03-24 公開日 2023-04-12 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (3.246383 Å) 主引用文献 Amino acid changes that deregulate PHOSPHOENOLPYRUVATE CARBOXYLASE in plants To Be Published
8OJE	Arabidopsis thaliana Phosphoenolpyruvate carboxylase PPC1 in complex with L-malate 分子名称: (2S)-2-hydroxybutanedioic acid, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Haesaerts, S, Loris, R, Larsen, P.B. 登録日 2023-03-24 公開日 2023-05-31 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.142399 Å) 主引用文献 Amino acid changes that deregulate PHOSPHOENOLPYRUVATE CARBOXYLASE in plants To Be Published
8OJF	Arabidopsis thaliana Phosphoenolpyruvate carboxylase PPC1 with bound phosphate 分子名称: CHLORIDE ION, PHOSPHATE ION, Phosphoenolpyruvate carboxylase 1 著者 Haesaerts, S, Loris, R, Larsen, P.B. 登録日 2023-03-24 公開日 2023-05-31 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (3.03683758 Å) 主引用文献 Amino acid changes that deregulate PHOSPHOENOLPYRUVATE CARBOXYLASE in plants To Be Published
6W2T	Structure of the Cricket Paralysis Virus 5-UTR IRES (CrPV 5-UTR-IRES) bound to the small ribosomal subunit in the closed state (Class 2) 分子名称: 18S rRNA, CrPV 5'-UTR IRES, Eukaryotic translation initiation factor 3 subunit A, ... 著者 Neupane, R, Pisareva, V, Rodriguez, C.F, Pisarev, A, Fernandez, I.S. 登録日 2020-03-08 公開日 2020-04-22 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.36 Å) 主引用文献 A complex IRES at the 5'-UTR of a viral mRNA assembles a functional 48S complex via an uAUG intermediate. Elife, 9, 2020
5YUV	DNA polymerase IV - DNA ternary complex 5 分子名称: DNA polymerase IV, DTN1, DTN2, ... 著者 Kottur, J, Nair, D.T. 登録日 2017-11-23 公開日 2018-10-03 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction Nucleic Acids Res., 46, 2018
2DRC	INVESTIGATION OF THE FUNCTIONAL ROLE OF TRYPTOPHAN-22 IN ESCHERICHIA COLI DIHYDROFOLATE REDUCTASE BY SITE-DIRECTED MUTAGENESIS 分子名称: CALCIUM ION, CHLORIDE ION, DIHYDROFOLATE REDUCTASE, ... 著者 Brown, K.A, Kraut, J. 登録日 1992-06-10 公開日 1994-01-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Investigation of the functional role of tryptophan-22 in Escherichia coli dihydrofolate reductase by site-directed mutagenesis. Biochemistry, 30, 1991
5YUX	DNA polymerase IV - DNA ternary complex 8 分子名称: DIPHOSPHATE, DNA polymerase IV, DTN1, ... 著者 Kottur, J, Nair, D.T. 登録日 2017-11-23 公開日 2018-12-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction Nucleic Acids Res., 46, 2018
5YV2	DNA polymerase IV - DNA ternary complex 14 分子名称: DNA polymerase IV, DTN1, DTN2, ... 著者 Kottur, J, Nair, D.T. 登録日 2017-11-23 公開日 2018-09-05 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction Nucleic Acids Res., 46, 2018
8OJY	Arabidopsis thaliana Phosphoenolpyruvate carboxylase PPC1 T778 mutant with bound malate 分子名称: (2S)-2-hydroxybutanedioic acid, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Loris, R, Haesaerts, S, Larsen, P.B. 登録日 2023-03-25 公開日 2024-04-03 実験手法 X-RAY DIFFRACTION (3.09893727 Å) 主引用文献 Amino acid changes that deregulate PHOSPHOENOLPYRUVATE CARBOXYLASE in plants To Be Published
5YYD	DNA polymerase IV - ternary complex 15 分子名称: 5'-O-[hydroxy{[hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]thymidine, DNA polymerase IV, DTN2, ... 著者 Kottur, J, Nair, D.T. 登録日 2017-12-08 公開日 2018-09-05 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction Nucleic Acids Res., 46, 2018
1HQ2	CRYSTAL STRUCTURE OF A TERNARY COMPLEX OF E.COLI HPPK(R82A) WITH MGAMPCPP AND 6-HYDROXYMETHYL-7,8-DIHYDROPTERIN AT 1.25 ANGSTROM RESOLUTION 分子名称: 2-AMINO-6-HYDROXYMETHYL-7,8-DIHYDRO-3H-PTERIDIN-4-ONE, 6-HYDROXYMETHYL-7,8-DIHYDROPTERIN PYROPHOSPHOKINASE, ACETATE ION, ... 著者 Blaszczyk, J, Ji, X. 登録日 2000-12-13 公開日 2003-04-15 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Dynamic Roles of Arginine Residues 82 and 92 of Escherichia coli 6-Hydroxymethyl-7,8-dihydropterin Pyrophosphokinase: Crystallographic Studies Biochemistry, 42, 2003
8OJQ	Arabidopsis thaliana Phosphoenolpyruvate carboxylase PPC1 T778 mutant with bound phosphate 分子名称: PHOSPHATE ION, Phosphoenolpyruvate carboxylase 1 著者 Haesaerts, S, Loris, R, Larsen, P. 登録日 2023-03-24 公開日 2024-04-03 実験手法 X-RAY DIFFRACTION (3.04938388 Å) 主引用文献 Amino acid changes that deregulate PHOSPHOENOLPYRUVATE CARBOXYLASE in plants To Be Published
8OJZ	Arabidopsis thaliana Phosphoenolpyruvate carboxylase 1 (PPC1) G678S mutant 分子名称: PHOSPHATE ION, Phosphoenolpyruvate carboxylase 1 著者 Loris, R, Haesaerts, S, Larsen, P.B. 登録日 2023-03-25 公開日 2024-04-03 実験手法 X-RAY DIFFRACTION (3.247811 Å) 主引用文献 Amino acid changes that deregulate PHOSPHOENOLPYRUVATE CARBOXYLASE in plants To Be Published
2CWG	CRYSTALLOGRAPHIC REFINEMENT AND STRUCTURE ANALYSIS OF THE COMPLEX OF WHEAT GERM AGGLUTININ WITH A BIVALENT SIALOGLYCOPEPTIDE FROM GLYCOPHORIN A 分子名称: AGGLUTININ ISOLECTIN 1 (WGA1), N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-[N-acetyl-alpha-neuraminic acid-(2-6)]2-acetamido-2-deoxy-alpha-D-glucopyranose, T5 SIALOGLYCOPEPTIDE OF GLYCOPHORIN A 著者 Wright, C.S. 登録日 1993-01-08 公開日 1994-01-31 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystallographic refinement and structure analysis of the complex of wheat germ agglutinin with a bivalent sialoglycopeptide from glycophorin A. J.Mol.Biol., 232, 1993
6RFO	ERK2 MAP kinase with the activation loop of p38alpha 分子名称: Mitogen-activated protein kinase 1,Mitogen-activated protein kinase 14,Mitogen-activated protein kinase 1 著者 Livnah, O, Eitan-Wexler, M. 登録日 2019-04-15 公開日 2020-05-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The bacterial metalloprotease NleD selectively cleaves mitogen-activated protein kinases that have high flexibility in their activation loop. J.Biol.Chem., 295, 2020

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