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7YU3
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Human Lysophosphatidic Acid Receptor 1-Gi complex bound to ONO-0740556
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
著者Akasaka, H, Shihoya, W, Nureki, O.
登録日2022-08-16
公開日2022-10-05
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of the active G i -coupled human lysophosphatidic acid receptor 1 complexed with a potent agonist.
Nat Commun, 13, 2022
7YU2
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Structure of 6-aminohexanoate-oligomer hydrolase NylC, D122G/H130Y/T267C mutant, hydroxylamine-treated
分子名称: 6-aminohexanoate-oligomer endohydrolase, GLYCEROL, SULFATE ION
著者Negoro, S, Higuchi, Y.
登録日2022-08-16
公開日2023-03-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献X-ray crystallographic and mutational analysis of the NylC precursor: catalytic mechanism of autocleavage and substrate hydrolysis of nylon hydrolase.
Febs J., 290, 2023
7YU1
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Structure of 6-aminohexanoate-oligomer hydrolase NylC precursor, D122G/H130Y/T267C mutant
分子名称: 6-aminohexanoate-oligomer endohydrolase, GLYCEROL, SODIUM ION, ...
著者Negoro, S, Higuchi, Y.
登録日2022-08-16
公開日2023-03-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献X-ray crystallographic and mutational analysis of the NylC precursor: catalytic mechanism of autocleavage and substrate hydrolysis of nylon hydrolase.
Febs J., 290, 2023
7YU0
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Structure of 6-aminohexanoate-oligomer hydrolase NylC precursor, H130Y/N266A/T267A mutant
分子名称: 6-aminohexanoate-oligomer endohydrolase, GLYCEROL, SODIUM ION, ...
著者Negoro, S, Higuchi, Y.
登録日2022-08-16
公開日2023-03-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献X-ray crystallographic and mutational analysis of the NylC precursor: catalytic mechanism of autocleavage and substrate hydrolysis of nylon hydrolase.
Febs J., 290, 2023
7YTH
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Structure of OCPx1 from Nostoc flagelliforme CCNUN1
分子名称: Ketosteroid isomerase-related protein
著者Yang, Y.W, Liu, K, Chen, S.Z, Chen, M, Qiu, B.S.
登録日2022-08-14
公開日2023-06-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Functional specialization of expanded orange carotenoid protein paralogs in subaerial Nostoc species.
Plant Physiol., 192, 2023
7YTF
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Structure of OCPx2 from Nostoc flagelliforme CCNUN1
分子名称: Ketosteroid isomerase-related protein, beta,beta-carotene-4,4'-dione
著者Yang, Y.W, Chen, S.Z, Liu, K, Chen, M, Qiu, B.S.
登録日2022-08-14
公開日2023-06-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Functional specialization of expanded orange carotenoid protein paralogs in subaerial Nostoc species.
Plant Physiol., 192, 2023
7YTB
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Crystal structure of Kin4B8
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Kin4B8, RETINAL
著者Murakoshi, S, Chazan, A, Shihoya, W, Beja, O, Nureki, O.
登録日2022-08-14
公開日2023-03-15
最終更新日2023-03-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Phototrophy by antenna-containing rhodopsin pumps in aquatic environments.
Nature, 615, 2023
7YTA
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crystal structure of NtAGDP3 AGD1-2 in complex with an H3K9me2 peptide
分子名称: AGDP3 AGD1-2, H3(1-15)K9me2 peptide
著者Zhou, X, Du, J.
登録日2022-08-13
公開日2022-10-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献The H3K9me2-binding protein AGDP3 limits DNA methylation and transcriptional gene silencing in Arabidopsis.
J Integr Plant Biol, 64, 2022
7YSZ
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Spiroplasma melliferum FtsZ bound to GDP
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
著者Chakraborty, J, Pananghat, G.
登録日2022-08-13
公開日2023-08-16
実験手法X-RAY DIFFRACTION (2.3000412 Å)
主引用文献Structural basis of kinetic polarity of FtsZ from a cell wall less bacterium Spiroplasma
To Be Published
7YSX
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Crystal structure of PDE4D complexed with licoisoflavone A
分子名称: 1,2-ETHANEDIOL, 3-[3-(3-methylbut-2-enyl)-2,4-bis(oxidanyl)phenyl]-5,7-bis(oxidanyl)chromen-4-one, MAGNESIUM ION, ...
著者Liu, J.Y, Li, M.J, Xu, Y.C.
登録日2022-08-13
公開日2023-07-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Bioactive compounds from Huashi Baidu decoction possess both antiviral and anti-inflammatory effects against COVID-19.
Proc.Natl.Acad.Sci.USA, 120, 2023
7YSW
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Cryo-EM Structure of FGF23-FGFR4-aKlotho-HS Quaternary Complex
分子名称: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid, COPPER (II) ION, Fibroblast growth factor 23, ...
著者Mohammadi, M, Chen, L.
登録日2022-08-13
公開日2023-06-14
最終更新日2023-07-05
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献Structural basis for FGF hormone signalling.
Nature, 618, 2023
7YSU
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Cryo-EM Structure of FGF23-FGFR3c-aKlotho-HS Quaternary Complex
分子名称: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid, COPPER (II) ION, Fibroblast growth factor 23, ...
著者Mohammadi, M, Chen, L.
登録日2022-08-13
公開日2023-04-19
最終更新日2023-07-05
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis for FGF hormone signalling.
Nature, 618, 2023
7YSL
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Crystal structure of D-Cysteine desulfhydrase with a trapped PLP-pyruvate geminal diamine
分子名称: 1,2-ETHANEDIOL, D-Cysteine desulfhydrase, FORMIC ACID
著者Zhang, X, Wang, L, Xu, X, Xing, X, Zhou, J.
登録日2022-08-12
公開日2022-12-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Characterization and structural basis of D-cysteine desulfhydrase from Pectobacterium atrosepticum
Tetrahedron, 2022
7YSK
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Crystal structure of D-Cysteine desulfhydrase from Pectobacterium atrosepticum
分子名称: D-Cysteine desulfhydrase
著者Zhang, X, Wang, L, Xu, X, Xing, X, Zhou, J.
登録日2022-08-12
公開日2022-12-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Characterization and structural basis of D-cysteine desulfhydrase from Pectobacterium atrosepticum
Tetrahedron, 2022
7YSH
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Cryo-EM Structure of FGF23-FGFR1c-aKlotho-HS Quaternary Complex
分子名称: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, COPPER (II) ION, Fibroblast growth factor 23, ...
著者Mohammadi, M, Chen, L.
登録日2022-08-12
公開日2023-04-19
最終更新日2023-07-05
実験手法ELECTRON MICROSCOPY (2.74 Å)
主引用文献Structural basis for FGF hormone signalling.
Nature, 618, 2023
7YS8
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Crystal Structure of UDP-glucose 4-epimerase (Rv3634c) from Mycobacterium tuberculosis
分子名称: ACETATE ION, GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Yadav, S, Bhatia, I, Biswal, B.K.
登録日2022-08-11
公開日2023-08-16
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Crystal Structure of UDP-glucose 4-epimerase (Rv3634c) from Mycobacterium tuberculosis
To Be Published
7YRZ
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Crystal structure of HCoV 229E main protease in complex with PF07321332
分子名称: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase
著者Zhou, Y.R, Zeng, P, Zhou, X.L, Lin, C, Zhang, J, Yin, X.S, Li, J.
登録日2022-08-11
公開日2023-08-16
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structural basis of main proteases of HCoV-229E bound to inhibitor PF-07304814 and PF-07321332.
Biochem.Biophys.Res.Commun., 657, 2023
7YRS
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Crystal structure of Lactobacillus rhamnosus 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase KduI complexed with MOPS
分子名称: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase, ZINC ION
著者Yamamoto, Y, Oiki, S, Takase, R, Mikami, B, Hashimoto, W.
登録日2022-08-10
公開日2023-08-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.802 Å)
主引用文献Crystal Structures of Lacticaseibacillus 4-Deoxy-L- threo- 5-hexosulose-uronate Ketol-isomerase KduI in Complex with Substrate Analogs.
J Appl Glycosci (1999), 70, 2023
7YRQ
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Cryo-EM structure of human Peroxisomal ABC Transporter ABCD1
分子名称: ATP-binding cassette sub-family D member 1, [(2~{R})-1-hexadecanoyloxy-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propan-2-yl] octadec-9-enoate
著者Chao, X, Li-Na, J, Lin, T.
登録日2022-08-10
公開日2023-03-22
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Structural insights into substrate recognition and translocation of human peroxisomal ABC transporter ALDP.
Signal Transduct Target Ther, 8, 2023
7YRP
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Crystal structure of VIM-28 metallo-beta-lactamase
分子名称: CITRATE ANION, GLYCEROL, Metallo-beta-lactamase VIM-28, ...
著者Shimizu-Ibuka, A, Sato, H.
登録日2022-08-10
公開日2023-06-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of VIM-28 metallo-beta-lactamase
To Be Published
7YRO
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Crystal structure of mango fucosyltransferase 13
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETIC ACID, Fucosyltransferase, ...
著者Okada, T, Teramoto, T, Ihara, H, Ikeda, Y, Kakuta, Y.
登録日2022-08-10
公開日2023-08-16
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Crystal structure of mango alpha 1,3/ alpha 1,4-fucosyltransferase elucidates unique elements that regulate Lewis A-dominant oligosaccharide assembly.
Glycobiology, 34, 2024
7YRK
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Crystal structure of the hen egg lysozyme-2-oxidobenzylidene-threoninato-copper (II) complex
分子名称: (6~{S})-6-[(1~{R})-1-oxidanylethyl]-2,4-dioxa-7$l^{4}-aza-3$l^{3}-cupratricyclo[7.4.0.0^{3,7}]trideca-1(13),7,9,11-tetraen-5-one, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Unno, M, Furuya, T, Kitanishi, K, Akitsu, T.
登録日2022-08-10
公開日2023-05-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (0.92 Å)
主引用文献A novel hybrid protein composed of superoxide-dismutase-active Cu(II) complex and lysozyme.
Sci Rep, 13, 2023
7YRA
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Crystal structure of [2Fe-2S]-TtPetA
分子名称: CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, GLYCEROL, ...
著者Tsutsumi, E, Niwa, S, Takeda, K.
登録日2022-08-09
公開日2023-09-20
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structure of a putative immature form of a Rieske-type iron-sulfur protein in complex with zinc chloride.
Commun Chem, 6, 2023
7YR9
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Crystal structure of the immature form of TtPetA
分子名称: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
著者Tsutsumi, E, Niwa, S, Takeda, K.
登録日2022-08-09
公開日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of a putative immature form of a Rieske-type iron-sulfur protein in complex with zinc chloride.
Commun Chem, 6, 2023
7YR8
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Lloviu cuevavirus nucleoprotein(1-450 residues)-RNA complex
分子名称: Nucleoprotein, RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3')
著者Hu, S.F, Fujita-Fujiharu, Y, Sugita, Y, Wendt, L, Muramoto, Y, Nakano, M, Hoenen, T, Noda, T.
登録日2022-08-09
公開日2023-04-19
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryoelectron microscopic structure of the nucleoprotein-RNA complex of the European filovirus, Lloviu virus.
Pnas Nexus, 2, 2023

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件を2024-08-14に公開中

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