PDB: 42250 件ウェブページステータス検索Chemie searchBIRD

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4Y4P	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Polikanov, Y.S, Melnikov, S.V, Soll, D, Steitz, T.A. 登録日 2015-02-10 公開日 2015-03-18 最終更新日 2025-03-19 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural insights into the role of rRNA modifications in protein synthesis and ribosome assembly. Nat.Struct.Mol.Biol., 22, 2015
4Y4O	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ... 著者 Polikanov, Y.S, Melnikov, S.V, Soll, D, Steitz, T.A. 登録日 2015-02-10 公開日 2015-03-18 最終更新日 2025-03-19 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural insights into the role of rRNA modifications in protein synthesis and ribosome assembly. Nat.Struct.Mol.Biol., 22, 2015
2BBW	Crystal structure of human adenylate kinase 4 (AK4) in complex with diguanosine pentaphosphate 分子名称: DIGUANOSINE-PENTAPHOSPHATE, adenylate kinase 4, AK4 著者 Filippakopoulos, P, Turnbull, A.P, Fedorov, O, Weigelt, J, Bunkoczi, G, Ugochukwu, E, Debreczeni, J, Niesen, F, von Delft, F, Edwards, A, Arrowsmith, C, Sundstrom, M, Knapp, S, Structural Genomics Consortium (SGC) 登録日 2005-10-17 公開日 2005-12-06 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Crystal structure of human adenylate kinase 4 (AK4) in complex with diguanosine pentaphosphate To be Published
4WF9	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 23S ribosomal RNA, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... 著者 Eyal, Z, Matzov, D, Krupkin, M, Wekselman, I, Zimmerman, E, Rozenberg, H, Bashan, A, Yonath, A.E. 登録日 2014-09-14 公開日 2015-10-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.427 Å) 主引用文献 Structural insights into species-specific features of the ribosome from the pathogen Staphylococcus aureus. Proc.Natl.Acad.Sci.USA, 112, 2015
4WU1	Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Rozov, A, Demeshkina, N, Yusupov, M, Yusupova, G. 登録日 2014-10-30 公開日 2015-06-10 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural insights into the translational infidelity mechanism. Nat Commun, 6, 2015
4WFB	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 23S rRNA, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... 著者 Eyal, Z, Matzov, D, Krupkin, M, Wekselman, I, Zimmerman, E, Rozenberg, H, Bashan, A, Yonath, A.E. 登録日 2014-09-14 公開日 2015-10-21 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (3.43 Å) 主引用文献 Structural insights into species-specific features of the ribosome from the pathogen Staphylococcus aureus. Proc.Natl.Acad.Sci.USA, 112, 2015
4WQF	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Lin, J, Gagnon, M.G, Steitz, T.A. 登録日 2014-10-21 公開日 2015-01-28 最終更新日 2024-12-25 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Conformational Changes of Elongation Factor G on the Ribosome during tRNA Translocation. Cell, 160, 2015
4YUU	Crystal structure of oxygen-evolving photosystem II from a red alga 分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... 著者 Ago, H, Shen, J.-R. 登録日 2015-03-19 公開日 2016-01-20 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.7700038 Å) 主引用文献 Novel Features of Eukaryotic Photosystem II Revealed by Its Crystal Structure Analysis from a Red Alga J.Biol.Chem., 291, 2016
4YPB	Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Schureck, M.A, Dunkle, J.A, Maehigashi, T, Dunham, C.M. 登録日 2015-03-12 公開日 2015-10-21 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Defining the mRNA recognition signature of a bacterial toxin protein. Proc.Natl.Acad.Sci.USA, 112, 2015
2AR7	Crystal structure of human adenylate kinase 4, AK4 分子名称: Adenylate kinase 4 著者 Filippakopoulos, P, Turnbull, A.P, Fedorov, O, Weigelt, J, Bunkoczi, G, Ugochukwu, E, Debreczeni, J, Niesen, F, von Delft, F, Edwards, A, Arrowsmith, C, Sundstrom, M, Structural Genomics Consortium (SGC) 登録日 2005-08-19 公開日 2005-12-06 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Crystal structure of human adenylate kinase 4, AK4 To be Published
2K7W	BAX Activation is Initiated at a Novel Interaction Site 分子名称: Apoptosis regulator BAX, Bcl-2-like protein 11 著者 Gavathiotis, E, Suzuki, M, Davis, M.L, Pitter, K, Bird, G.H, Katz, S.G, Tu, H.C, Kim, H, Cheng, E.H, Tjandra, N, Walensky, L.D. 登録日 2008-08-27 公開日 2008-10-21 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 BAX activation is initiated at a novel interaction site. Nature, 455, 2008
6Z4K	A4V mutant of human SOD1 bound with benzyl benzoisoselenazolone derivative 6 in P21 space group 分子名称: CHLORIDE ION, Superoxide dismutase [Cu-Zn], ZINC ION, ... 著者 Amporndanai, K, Hasnain, S.S. 登録日 2020-05-25 公開日 2020-09-16 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis. Ebiomedicine, 59, 2020
6Z4J	A4V mutant of human SOD1 bound with benzyl benzoisoselenazolone derivative 5 in P21 space group 分子名称: CHLORIDE ION, Superoxide dismutase [Cu-Zn], ZINC ION, ... 著者 Amporndanai, K, Hasnain, S.S. 登録日 2020-05-25 公開日 2020-09-16 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis. Ebiomedicine, 59, 2020
6Z6L	Cryo-EM structure of human CCDC124 bound to 80S ribosomes 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... 著者 Wells, J.N, Buschauer, R, Mackens-Kiani, T, Best, K, Kratzat, H, Berninghausen, O, Becker, T, Cheng, J, Beckmann, R. 登録日 2020-05-28 公開日 2020-07-29 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structure and function of yeast Lso2 and human CCDC124 bound to hibernating ribosomes. Plos Biol., 18, 2020
6Z4M	A4V mutant of human SOD1 bound with 2-(pyridin-3-ylmethyl)benzoisoselenazolone derivative 10 in P21 space group 分子名称: CHLORIDE ION, SULFATE ION, Superoxide dismutase [Cu-Zn], ... 著者 Amporndanai, K, Hasnain, S.S. 登録日 2020-05-25 公開日 2020-09-16 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis. Ebiomedicine, 59, 2020
6Z4H	A4V mutant of human SOD1 bound with benzyl benzoisoselenazolone derivative 2 in P21 space group 分子名称: SULFATE ION, Superoxide dismutase [Cu-Zn], ZINC ION, ... 著者 Amporndanai, K, Hasnain, S.S. 登録日 2020-05-25 公開日 2020-09-16 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis. Ebiomedicine, 59, 2020
6Z4L	A4V mutant of human SOD1 bound with 2-(pyridin-3-ylmethyl)benzoisoselenazolone derivative 9 in P21 space group 分子名称: SULFATE ION, Superoxide dismutase [Cu-Zn], ZINC ION, ... 著者 Amporndanai, K, Hasnain, S.S. 登録日 2020-05-25 公開日 2020-09-16 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis. Ebiomedicine, 59, 2020
6LBH	Cryo-EM structure of the MgtE Mg2+ channel under Mg2+-free conditions 分子名称: Fab heavy chain, Fab light chain, Magnesium transporter MgtE 著者 Hattori, M, Jin, F. 登録日 2019-11-14 公開日 2021-04-14 最終更新日 2025-07-02 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 The structure of MgtE in the absence of magnesium provides new insights into channel gating. Plos Biol., 19, 2021
6Z4G	A4V mutant of human SOD1 bound with ebselen in P21 space group 分子名称: ACETATE ION, CHLORIDE ION, N-phenyl-2-selanylbenzamide, ... 著者 Amporndanai, K, Hasnain, S.S. 登録日 2020-05-25 公開日 2020-09-16 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis. Ebiomedicine, 59, 2020
6LQR	Cryo-EM structure of 90S small subunit preribosomes in transition states (State C) 分子名称: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S1-A, ... 著者 Du, Y, Ye, K. 登録日 2020-01-14 公開日 2020-09-16 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (8.6 Å) 主引用文献 Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states. Science, 369, 2020
6LQV	Cryo-EM structure of 90S small subunit preribosomes in transition states (State C1) 分子名称: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S11-A, ... 著者 Du, Y, Ye, K. 登録日 2020-01-14 公開日 2020-09-16 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states. Science, 369, 2020
6UZV	The structure of a red shifted photosystem I complex 分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ... 著者 Toporik, H, Williams, D, Chiu, P.L, Mazor, Y. 登録日 2019-11-15 公開日 2020-09-16 最終更新日 2024-10-30 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 The structure of a red-shifted photosystem I reveals a red site in the core antenna. Nat Commun, 11, 2020
8CGN	Non-rotated 80S S. cerevisiae ribosome with ligands 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G. 登録日 2023-02-06 公開日 2023-09-20 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.28 Å) 主引用文献 mRNA reading frame maintenance during eukaryotic ribosome translocation. Nature, 625, 2024
8CIV	Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G. 登録日 2023-02-10 公開日 2023-09-20 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.47 Å) 主引用文献 mRNA reading frame maintenance during eukaryotic ribosome translocation. Nature, 625, 2024
8OKX	Structure of cGAS in complex with SPSB3-ELOBC 分子名称: Cyclic GMP-AMP synthase, Elongin-B, Elongin-C, ... 著者 Xu, P.B, Ablasser, A. 登録日 2023-03-29 公開日 2024-02-14 最終更新日 2025-07-09 実験手法 ELECTRON MICROSCOPY (3.51 Å) 主引用文献 The CRL5-SPSB3 ubiquitin ligase targets nuclear cGAS for degradation. Nature, 627, 2024

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