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4ETC
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Lysozyme, room temperature, 24 kGy dose
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Boutet, S, Lomb, L, Williams, G, Barends, T, Aquila, A, Doak, R.B, Weierstall, U, DePonte, D, Steinbrener, J, Shoeman, R, Messerschmidt, M, Barty, A, White, T, Kassemeyer, S, Kirian, R, Seibert, M, Montanez, P, Kenney, C, Herbst, R, Hart, P, Pines, J, Haller, G, Gruner, S, Philllip, H, Tate, M, Hromalik, M, Koerner, L, van Bakel, N, Morse, J, Ghonsalves, W, Arnlund, D, Bogan, M, Calemann, C, Fromme, R, Hampton, C, Hunter, M, Johansson, L, Katona, G, Kupitz, C, Liang, M, Martin, A, Nass, K, Redecke, L, Stellato, F, Timneanu, N, Wang, D, Zatsepin, N, Schafer, D, Defever, K, Neutze, R, Fromme, P, Spence, J, Chapman, H, Schlichting, I.
登録日2012-04-24
公開日2012-06-13
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.906 Å)
主引用文献High-resolution protein structure determination by serial femtosecond crystallography.
Science, 337, 2012
2DYS
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BU of 2dys by Molmil
Bovine heart cytochrome C oxidase modified by DCCD
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
著者Shinzawa-Itoh, K, Aoyama, H, Muramoto, K, Kurauchi, T, Mizushima, T, Yamashita, E, Tsukihara, T, Yoshikawa, S.
登録日2006-09-16
公開日2007-04-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structures and physiological roles of 13 integral lipids of bovine heart cytochrome c oxidase
Embo J., 26, 2007
4MKJ
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Crystal structure of L-methionine gamma-lyase from Citrobacter freundii modified by allicine
分子名称: Methionine gamma-lyase, PENTAETHYLENE GLYCOL, SODIUM ION, ...
著者Revtovich, S.V, Nikulin, A.D, Morozova, E.A, Zakomirdina, L.N, Demidkina, T.V.
登録日2013-09-05
公開日2014-11-12
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.849 Å)
主引用文献Alliin is a suicide substrate of Citrobacter freundii methionine gamma-lyase: structural bases of inactivation of the enzyme.
Acta Crystallogr.,Sect.D, 70, 2014
4D9T
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Rsk2 C-terminal Kinase Domain with inhibitor (E)-methyl 3-(4-amino-7-(3-hydroxypropyl)-5-p-tolyl-7H-pyrrolo[2,3-d]pyrimidin-6-yl)-2-cyanoacrylate
分子名称: Ribosomal protein S6 kinase alpha-3, SODIUM ION, methyl (2S)-3-{4-amino-7-[(1E)-3-hydroxyprop-1-en-1-yl]-5-(4-methylphenyl)-7H-pyrrolo[2,3-d]pyrimidin-6-yl}-2-cyanopropanoate
著者Serafimova, I.M, Pufall, M.A, Krishnan, S, Duda, K, Cohen, M.S, Maglathlin, R.L, McFarland, J.M, Miller, R.M, Frodin, M, Taunton, J.
登録日2012-01-12
公開日2012-04-25
最終更新日2012-05-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Reversible targeting of noncatalytic cysteines with chemically tuned electrophiles.
Nat.Chem.Biol., 8, 2012
2EIL
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BU of 2eil by Molmil
Cadmium ion binding structure of bovine heart cytochrome C oxidase in the fully oxidized state
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
著者Muramoto, K, Hirata, K, Shinzawa-Itoh, K, Yoko-o, S, Yamashita, E, Aoyama, H, Tsukihara, T, Yoshikawa, S.
登録日2007-03-13
公開日2007-05-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A histidine residue acting as a controlling site for dioxygen reduction and proton pumping by cytochrome c oxidase
Proc.Natl.Acad.Sci.Usa, 104, 2007
4D77
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BU of 4d77 by Molmil
High-resolution structure of the extracellular olfactomedin domain from gliomedin
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLIOMEDIN, SODIUM ION
著者Han, H, Kursula, P.
登録日2014-11-20
公開日2014-12-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.481 Å)
主引用文献The Olfactomedin Domain from Gliomedin is a Beta-Propeller with Unique Structural Properties.
J.Biol.Chem., 290, 2015
4CTJ
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DENGUE 3 NS5 METHYLTRANSFERASE BOUND TO S-ADENOSYL METHIONINE AND FRAGMENT 3A9
分子名称: 2,3-dihydro-1-benzofuran-5-carboxylic acid, NON-STRUCTURAL PROTEIN 5, S-ADENOSYLMETHIONINE, ...
著者Barral, K, Bricogne, G, Sharff, A.
登録日2014-03-14
公開日2014-04-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Assessment of Dengue Virus Helicase and Methyltransferase as Targets for Fragment-Based Drug Discovery.
Antiviral Res., 106, 2014
3FPC
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Chimera of alcohol dehydrogenase by exchange of the cofactor binding domain res 153-294 of T. brockii ADH by E. histolytica ADH
分子名称: 1,2-ETHANEDIOL, CACODYLATE ION, IMIDAZOLE, ...
著者Felix, F, Goihberg, E, Shimon, L, Burstein, Y.
登録日2009-01-05
公開日2010-01-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Biochemical and structural properties of chimeras constructed by exchange of cofactor-binding domains in alcohol dehydrogenases from thermophilic and mesophilic microorganisms
Biochemistry, 49, 2010
3NU6
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Crystal Structure of HIV-1 Protease Mutant I54M with Antiviral Drug Amprenavir
分子名称: ACETATE ION, CHLORIDE ION, Protease, ...
著者Shen, C.H, Weber, I.T.
登録日2010-07-06
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Amprenavir complexes with HIV-1 protease and its drug-resistant mutants altering hydrophobic clusters.
Febs J., 277, 2010
3NYT
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BU of 3nyt by Molmil
X-ray crystal structure of the WlbE (WpbE) aminotransferase from pseudomonas aeruginosa, mutation K185A, in complex with the PLP external aldimine adduct with UDP-3-amino-2-N-acetyl-glucuronic acid, at 1.3 angstrom resolution
分子名称: (2S,3S,4R,5R,6R)-5-(acetylamino)-6-{[(R)-{[(S)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-3-hydroxy-4-{[(1E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}tetrahydro-2H-pyran-2-carboxylic acid (non-preferred name), Aminotransferase WbpE, SODIUM ION
著者Holden, H.M, Thoden, J.B.
登録日2010-07-15
公開日2010-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.301 Å)
主引用文献Structural investigation on WlaRG from Campylobacter jejuni: A sugar aminotransferase.
Protein Sci., 26, 2017
4DEF
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BU of 4def by Molmil
Active site loop dynamics of a class IIa fructose 1,6-bisphosphate aldolase from M. tuberculosis
分子名称: ACETATE ION, Fructose-bisphosphate aldolase, SODIUM ION, ...
著者Capodagli, G.C, Pegan, S.D.
登録日2012-01-20
公開日2013-01-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Active site loop dynamics of a class IIa fructose 1,6-bisphosphate aldolase from Mycobacterium tuberculosis.
Biochemistry, 52, 2013
4E27
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Crystal Structure of a Pentameric Capsid Protein Isolated from Metagenomic Phage Sequences Solved by Iodide SAD Phasing
分子名称: Capsid Protein, IODIDE ION, SODIUM ION
著者Craig, T.K, Abendroth, J, Lorimer, D, Burgin Jr, A.B, Segall, A, Rohwer, F.
登録日2012-03-07
公開日2013-03-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of a Pentameric Capsid Protein Isolated from Metagenomic Phage Sequences Solved by Iodide SAD Phasing
To be Published
4DJT
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BU of 4djt by Molmil
Crystal structure of a nuclear GTP-binding protein from Encephalitozoon cuniculi bound to GDP-Mg2+
分子名称: GTP-binding nuclear protein GSP1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2012-02-02
公開日2012-02-15
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of a nuclear GTP-binding protein from Encephalitozoon cuniculi bound to GDP-Mg2+
To be Published
3CGL
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BU of 3cgl by Molmil
Crystal Structure and Raman Studies of dsFP483, a Cyan Fluorescent Protein from Discosoma striata
分子名称: GFP-like fluorescent chromoprotein dsFP483, SODIUM ION
著者Malo, G.D.
登録日2008-03-05
公開日2008-07-01
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Crystal structure and Raman studies of dsFP483, a cyan fluorescent protein from Discosoma striata.
J.Mol.Biol., 378, 2008
2WIQ
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BU of 2wiq by Molmil
Fluorescent protein KillerRed in the native state
分子名称: KILLERRED, SODIUM ION, SULFATE ION
著者Carpentier, P, Violot, S, Blanchoin, L, Bourgeois, D.
登録日2009-05-15
公開日2009-08-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis for the Phototoxicity of the Fluorescent Protein Killerred.
FEBS Lett., 583, 2009
3O4J
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BU of 3o4j by Molmil
Structure and Catalysis of Acylaminoacyl Peptidase
分子名称: Acylamino-acid-releasing enzyme, CHLORIDE ION, GLYCEROL, ...
著者Harmat, V, Domokos, K, Menyhard, D.K, Pallo, A, Szeltner, Z, Szamosi, I, Beke-Somfai, T, Naray-Szabo, G, Polgar, L.
登録日2010-07-27
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure and Catalysis of Acylaminoacyl Peptidase: CLOSED AND OPEN SUBUNITS OF A DIMER OLIGOPEPTIDASE.
J.Biol.Chem., 286, 2011
2WQK
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BU of 2wqk by Molmil
Crystal Structure of Sure Protein from Aquifex aeolicus
分子名称: 5'-NUCLEOTIDASE SURE, SODIUM ION, SULFATE ION
著者Antonyuk, S.V, Ellis, M.J, Strange, R.W, Hasnain, S.S, Bessho, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-08-23
公開日2009-09-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of Sure Protein from Aquifex Aeolicus Vf5 at 1.5 A Resolution.
Acta Crystallogr.,Sect.F, 65, 2009
3O7W
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BU of 3o7w by Molmil
The Crystal Structure of Human Leucine Carboxyl Methyltransferase 1
分子名称: GLYCEROL, Leucine carboxyl methyltransferase 1, S-ADENOSYLMETHIONINE, ...
著者Tsai, M.L, Cronin, N, Djordjevic, S.
登録日2010-08-01
公開日2010-09-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The structure of human leucine carboxyl methyltransferase 1 that regulates protein phosphatase PP2A
Acta Crystallogr.,Sect.D, 67, 2011
4MJD
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BU of 4mjd by Molmil
Crystal structure of ketosteroid isomerase fold protein Hmuk_0747
分子名称: Ketosteroid isomerase fold protein Hmuk_0747, MAGNESIUM ION, SODIUM ION
著者Chang, C, Holowicki, J, Bearden, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2013-09-03
公開日2013-09-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Crystal structure of ketosteroid isomerase fold protein Hmuk_0747
To be Published
4MPR
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BU of 4mpr by Molmil
Benzoylformate Decarboxylase: Is the tetramer vital for activity?
分子名称: Benzoylformate decarboxylase, CALCIUM ION, CHLORIDE ION, ...
著者Andrews, F.H, McLeish, M.J.
登録日2013-09-13
公開日2014-08-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.401 Å)
主引用文献Perturbation of the monomer-monomer interfaces of the benzoylformate decarboxylase tetramer.
Biochemistry, 53, 2014
4DGV
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BU of 4dgv by Molmil
Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the broadly neutralizing antibody HCV1, P2(1) form
分子名称: E2 peptide, HCV1 Heavy Chain, HCV1 Light Chain, ...
著者Kong, L, Wilson, I.A, Law, M.
登録日2012-01-26
公開日2012-05-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.805 Å)
主引用文献Structural basis of hepatitis C virus neutralization by broadly neutralizing antibody HCV1.
Proc.Natl.Acad.Sci.USA, 109, 2012
3NRV
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BU of 3nrv by Molmil
Crystal structure of MarR/EmrR family transcriptional regulator from Acinetobacter sp. ADP1
分子名称: GLYCEROL, Putative transcriptional regulator (MarR/EmrR family), SODIUM ION, ...
著者Zhang, R, Wu, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2010-06-30
公開日2010-09-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Crystal structure of MarR/EmrR family transcriptional regulator from Acinetobacter sp. ADP1
To be Published
2WIS
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BU of 2wis by Molmil
Fluorescent protein KillerRed in the bleached state
分子名称: KILLERRED, SODIUM ION
著者Carpentier, P, Violot, S, Blanchoin, L, Bourgeois, D.
登録日2009-05-15
公開日2009-08-11
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural Basis for the Phototoxicity of the Fluorescent Protein Killerred.
FEBS Lett., 583, 2009
4E71
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Crystal structure of the RHO GTPASE binding domain of Plexin B2
分子名称: Plexin-B2, SODIUM ION
著者Guan, X, Wang, H, Tempel, W, Tong, Y, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Park, H, Structural Genomics Consortium (SGC)
登録日2012-03-16
公開日2012-03-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Crystal structure of the RHO GTPASE binding domain of Plexin B2
to be published
1PH6
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BU of 1ph6 by Molmil
Crystal Structure of THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGTGG
分子名称: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3', 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*TP*GP*G)-3', SODIUM ION, ...
著者Theobald, D.L, Schultz, S.C.
登録日2003-05-29
公開日2003-06-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Nucleotide Shuffling and ssDNA Recognition in Oxytricha Nova Telomere End-Binding Protein Complexes
Embo J., 22, 2003

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