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PDB: 33 results

1ANU
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COHESIN-2 DOMAIN OF THE CELLULOSOME FROM CLOSTRIDIUM THERMOCELLUM
Descriptor: COHESIN-2
Authors:Shimon, L.J.W, Yaron, S, Shoham, Y, Lamed, R, Morag, E, Bayer, E.A, Frolow, F.
Deposit date:1996-07-19
Release date:1997-07-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A cohesin domain from Clostridium thermocellum: the crystal structure provides new insights into cellulosome assembly.
Structure, 5, 1997
2HOX
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alliinase from allium sativum (garlic)
Descriptor: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shimon, L.J.W, Rabinkov, A, Wilcheck, M, Mirelman, D, Frolow, F.
Deposit date:2006-07-17
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Two Structures of Alliinase from Alliium sativum L.: Apo Form and Ternary Complex with Aminoacrylate Reaction Intermediate Covalently Bound to the PLP Cofactor.
J.Mol.Biol., 366, 2007
1G43
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CRYSTAL STRUCTURE OF A FAMILY IIIA CBD FROM CLOSTRIDIUM CELLULOLYTICUM
Descriptor: CALCIUM ION, SCAFFOLDING PROTEIN, ZINC ION
Authors:Shimon, L.J.W, Pages, S, Belaich, A, Belaich, J.-P, Bayer, E.A, Lamed, R, Shoham, Y, Frolow, F.
Deposit date:2000-10-26
Release date:2000-12-01
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of a family IIIa scaffoldin CBD from the cellulosome of Clostridium cellulolyticum at 2.2 A resolution.
Acta Crystallogr.,Sect.D, 56, 2000
1Y9A
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Alcohol Dehydrogenase from Entamoeba histolotica in complex with cacodylate
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CACODYLATE ION, ...
Authors:Shimon, L.J, Peretz, M, Goihberg, E, Burstein, Y, Frolow, F.
Deposit date:2004-12-15
Release date:2006-01-17
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structure of alcohol dehydrogenase from Entamoeba histolytica.
Acta Crystallogr.,Sect.D, 62, 2006
2HOR
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BU of 2hor by Molmil
Crystal structure of alliinase from garlic- apo form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Alliin lyase 1, ...
Authors:Shimon, L.J.W, Rabinkov, A, Wilcheck, M, Mirelman, D, Frolow, F.
Deposit date:2006-07-16
Release date:2007-02-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Two Structures of Alliinase from Alliium sativum L.: Apo Form and Ternary Complex with Aminoacrylate Reaction Intermediate Covalently Bound to the PLP Cofactor.
J.Mol.Biol., 366, 2007
1RPE
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BU of 1rpe by Molmil
THE PHAGE 434 OR2/R1-69 COMPLEX AT 2.5 ANGSTROMS RESOLUTION
Descriptor: DNA (5'-D(*AP*CP*AP*AP*AP*CP*AP*AP*GP*AP*TP*AP*CP*AP*TP*TP*G P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*CP*AP*AP*TP*GP*TP*AP*TP*CP*TP*TP*GP*T P*TP*TP*G)-3'), PROTEIN (434 REPRESSOR)
Authors:Shimon, L.J.W, Harrison, S.C.
Deposit date:1993-03-24
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The phage 434 OR2/R1-69 complex at 2.5 A resolution.
J.Mol.Biol., 232, 1993
4JO5
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BU of 4jo5 by Molmil
CBM3a-L domain with flanking linkers from scaffoldin cipA of cellulosome of Clostridium thermocellum
Descriptor: 1-METHYLIMIDAZOLE, CALCIUM ION, CHLORIDE ION, ...
Authors:Shimon, L.J.W, Frolow, F, Bayer, E.A, Yaniv, O, Lamed, R, Morag, E.
Deposit date:2013-03-16
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structure of a family 3a carbohydrate-binding module from the cellulosomal scaffoldin CipA of Clostridium thermocellum with flanking linkers: implications for cellulosome structure.
Acta Crystallogr.,Sect.F, 69, 2013
1ZV9
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Crystal structure analysis of a type II cohesin domain from the cellulosome of Acetivibrio cellulolyticus- SeMet derivative
Descriptor: 1,2-ETHANEDIOL, 1,3-PROPANDIOL, ACETIC ACID, ...
Authors:Noach, I, Rosenheck, S, Lamed, R, Shimon, L, Bayer, E, Frolow, F.
Deposit date:2005-06-01
Release date:2006-06-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Intermodular linker flexibility revealed from crystal structures of adjacent cellulosomal cohesins of Acetivibrio cellulolyticus.
J.Mol.Biol., 391, 2009
4N2O
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BU of 4n2o by Molmil
Structure of a novel autonomous cohesin protein from Ruminococcus flavefaciens
Descriptor: Autonomous cohesin, CHLORIDE ION
Authors:Frolow, F, Voronov-Goldman, M, Levy-Assaraf, M, Lamed, R, Bayer, E, Shimon, L.
Deposit date:2013-10-05
Release date:2013-12-18
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.442 Å)
Cite:Structural characterization of a novel autonomous cohesin from Ruminococcus flavefaciens.
Acta Crystallogr F Struct Biol Commun, 70, 2014
4WKZ
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Complex of autonomous ScaG cohesin CohG and X-doc domains
Descriptor: ACETATE ION, Autonomous cohesin, CALCIUM ION, ...
Authors:Voronov-Goldman, M, Lamed, R, Bayer, E.A, Yaniv, O, Shimon, L.J.W.
Deposit date:2014-10-05
Release date:2015-12-23
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Complex of autonomous ScaG cohesin CohG and X-doc domains
To Be Published
1TYJ
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Crystal Structure Analysis of type II Cohesin A11 from Bacteroides cellulosolvens
Descriptor: 1,2-ETHANEDIOL, METHANOL, cellulosomal scaffoldin
Authors:Noach, I, Frolow, F, Jakoby, H, Rosenheck, S, Shimon, L.J.W, Lamed, R, Bayer, E.A.
Deposit date:2004-07-08
Release date:2005-04-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a type-II cohesin module from the Bacteroides cellulosolvens cellulosome reveals novel and distinctive secondary structural elements
J.Mol.Biol., 348, 2005
1LJM
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DNA recognition is mediated by conformational transition and by DNA bending
Descriptor: CHLORIDE ION, RUNX1 transcription factor
Authors:Bartfeld, D, Shimon, L, Couture, G.C, Rabinovich, D, Frolow, F, Levanon, D, Groner, Y, Shakked, Z.
Deposit date:2002-04-22
Release date:2002-11-06
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:DNA Recognition by the RUNX1 Transcription Factor Is Mediated by an Allosteric Transition in the RUNT Domain and by DNA Bending.
Structure, 10
2OUI
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D275P mutant of alcohol dehydrogenase from protozoa Entamoeba histolytica
Descriptor: 1,2-ETHANEDIOL, CACODYLATE ION, CHLORIDE ION, ...
Authors:Frolow, F, Shimon, L, Burstein, Y, Goihberg, E, Peretz, M, Dym, O.
Deposit date:2007-02-11
Release date:2008-02-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Thermal stabilization of the protozoan Entamoeba histolytica alcohol dehydrogenase by a single proline substitution.
Proteins, 72, 2008
1QZN
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BU of 1qzn by Molmil
Crystal Structure Analysis of a type II cohesin domain from the cellulosome of Acetivibrio cellulolyticus
Descriptor: cellulosomal scaffoldin adaptor protein B
Authors:Frolow, F, Noach, I, Rosenheck, S, Lamed, R, Qi, X, Shimon, L.J.W, Bayer, E.A.
Deposit date:2003-09-17
Release date:2004-09-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a type-II cohesin module from the Bacteroides cellulosolvens cellulosome reveals novel and distinctive secondary structural elements.
J.Mol.Biol., 348, 2005
3FTN
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BU of 3ftn by Molmil
Q165E/S254K Double Mutant Chimera of alcohol dehydrogenase by exchange of the cofactor binding domain res 153-295 of T. brockii ADH by C. beijerinckii ADH
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Frolow, F, Goihberg, E, Shimon, L, Burstein, Y.
Deposit date:2009-01-13
Release date:2010-01-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.192 Å)
Cite:Biochemical and structural properties of chimeras constructed by exchange of cofactor-binding domains in alcohol dehydrogenases from thermophilic and mesophilic microorganisms.
Biochemistry, 49, 2010
3BWZ
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BU of 3bwz by Molmil
Crystal structure of the type II cohesin module from the cellulosome of Acetivibrio cellulolyticus with an extended linker conformation
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Cellulosomal scaffoldin adaptor protein B, ...
Authors:Noach, I, Lamed, R, Shimon, L.J.W, Bayer, E, Frolow, F.
Deposit date:2008-01-10
Release date:2009-01-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Intermodular linker flexibility revealed from crystal structures of adjacent cellulosomal cohesins of Acetivibrio cellulolyticus.
J.Mol.Biol., 391, 2009
2XDH
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Non-cellulosomal cohesin from the hyperthermophilic archaeon Archaeoglobus fulgidus
Descriptor: CHLORIDE ION, COHESIN, MAGNESIUM ION, ...
Authors:Voronov-Goldman, M, Lamed, R, Noach, I, Borovok, I, Kwiat, M, Rosenheck, S, Shimon, L.J.W, Bayer, E.A, Frolow, F.
Deposit date:2010-05-02
Release date:2010-05-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Non-Cellulosomal Cohesin from the Hyperthermophilic Archaeon Archaeoglobus Fulgidus
Proteins, 79, 2011
2WO4
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BU of 2wo4 by Molmil
3b' carbohydrate-binding module from the Cel9V glycoside hydrolase from Clostridium thermocellum, in-house data
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCOSIDE HYDROLASE, ...
Authors:Petkun, S, Jindou, S, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
Deposit date:2009-07-21
Release date:2009-12-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of a Family 3B' Carbohydrate-Binding Module from the Cel9V Glycoside Hydrolase from Clostridium Thermocellum: Structural Diversity and Implications for Carbohydrate Binding
Acta Crystallogr.,Sect.D, 66, 2010
2WOB
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3b' carbohydrate-binding module from the Cel9V glycoside hydrolase from Clostridium thermocellum. Orthorhombic structure
Descriptor: CALCIUM ION, GLYCOSIDE HYDROLASE, FAMILY 9
Authors:Petkun, S, Jindou, S, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
Deposit date:2009-07-22
Release date:2009-12-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a Family 3B' Carbohydrate-Binding Module from the Cel9V Glycoside Hydrolase from Clostridium Thermocellum: Structural Diversity and Implications for Carbohydrate Binding
Acta Crystallogr.,Sect.D, 66, 2010
2WNX
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3b' carbohydrate-binding module from the Cel9V glycoside hydrolase from Clostridium thermocellum
Descriptor: CALCIUM ION, FORMIC ACID, GLYCOSIDE HYDROLASE, ...
Authors:Petkun, S, Jindou, S, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
Deposit date:2009-07-20
Release date:2009-12-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Structure of a Family 3B' Carbohydrate-Binding Module from the Cel9V Glycoside Hydrolase from Clostridium Thermocellum: Structural Diversity and Implications for Carbohydrate Binding
Acta Crystallogr.,Sect.D, 66, 2010
2XBT
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Structure of a scaffoldin carbohydrate-binding module family 3b from the cellulosome of Bacteroides cellulosolvens: Structural diversity and implications for carbohydrate binding
Descriptor: CELLULOSOMAL SCAFFOLDIN, NITRATE ION
Authors:Yaniv, O, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
Deposit date:2010-04-15
Release date:2011-04-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.832 Å)
Cite:Scaffoldin-Borne Family 3B Carbohydrate-Binding Module from the Cellulosome of Bacteroides Cellulosolvens: Structural Diversity and Significance of Calcium for Carbohydrate Binding
Acta Crystallogr.,Sect.D, 67, 2011
2YLK
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BU of 2ylk by Molmil
Carbohydrate-binding module CBM3b from the cellulosomal cellobiohydrolase 9A from Clostridium thermocellum
Descriptor: CELLULOSE 1,4-BETA-CELLOBIOSIDASE
Authors:Yaniv, O, Petkun, S, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
Deposit date:2011-06-02
Release date:2012-04-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Single Mutation Reforms the Binding Activity of an Adhesion-Deficient Family 3 Carbohydrate-Binding Module
Acta Crystallogr.,Sect.D, 68, 2012
3FPC
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Chimera of alcohol dehydrogenase by exchange of the cofactor binding domain res 153-294 of T. brockii ADH by E. histolytica ADH
Descriptor: 1,2-ETHANEDIOL, CACODYLATE ION, IMIDAZOLE, ...
Authors:Felix, F, Goihberg, E, Shimon, L, Burstein, Y.
Deposit date:2009-01-05
Release date:2010-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Biochemical and structural properties of chimeras constructed by exchange of cofactor-binding domains in alcohol dehydrogenases from thermophilic and mesophilic microorganisms
Biochemistry, 49, 2010
3ZQX
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Carbohydrate-binding module CBM3b from the cellulosomal cellobiohydrolase 9A from Clostridium thermocellum
Descriptor: CALCIUM ION, CELLULOSE 1,4-BETA-CELLOBIOSIDASE
Authors:Yaniv, O, Petkun, S, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
Deposit date:2011-06-12
Release date:2012-04-25
Last modified:2012-07-11
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:A Single Mutation Reforms the Binding Activity of an Adhesion-Deficient Family 3 Carbohydrate-Binding Module
Acta Crystallogr.,Sect.D, 68, 2012
4B9F
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High resolution structure for family 3a carbohydrate binding module from the cipA scaffolding of clostridium thermocellum
Descriptor: CALCIUM ION, CELLULOSOMAL-SCAFFOLDING PROTEIN A, SULFATE ION
Authors:Yaniv, O, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F.
Deposit date:2012-09-04
Release date:2012-09-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:High Resolution Structure of the Family 3A Carbohydrate-Binding Module from the Mafor Scaffoldin Subunit Cipa of Clostridium Thermocellum
To be Published

 

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