PDB: 42250 件ウェブページステータス検索Chemie searchBIRD

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4WBI	Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutations H230Q and H309Q 分子名称: 2',3'-cyclic-nucleotide 3'-phosphodiesterase 著者 Myllykoski, M, Raasakka, A, Kursula, P. 登録日 2014-09-03 公開日 2015-09-23 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Determinants of ligand binding and catalytic activity in the myelin enzyme 2',3'-cyclic nucleotide 3'-phosphodiesterase. Sci Rep, 5, 2015
4WCA	Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation H230Q, complexed with citrate 分子名称: 2',3'-cyclic-nucleotide 3'-phosphodiesterase, CHLORIDE ION, CITRIC ACID, ... 著者 Myllykoski, M, Raasakka, A, Kursula, P. 登録日 2014-09-04 公開日 2015-09-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Determinants of ligand binding and catalytic activity in the myelin enzyme 2',3'-cyclic nucleotide 3'-phosphodiesterase. Sci Rep, 5, 2015
4UU2	Ferulic acid decarboxylase from Enterobacter sp., single mutant 分子名称: FERULIC ACID DECARBOXYLASE, GLYCINE, PHOSPHATE ION, ... 著者 Hromic, A, Pavkov-Keller, T, Steinkellner, G, Lyskowski, A, Wuensch, C, Gross, J, Fuchs, M, Fauland, K, Glueck, S.M, Faber, K, Gruber, K. 登録日 2014-07-24 公開日 2015-06-10 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 Regioselective Enzymatic Beta-Carboxylation of Para-Hydroxy-Styrene Derivatives Catalyzed by Phenolic Acid Decarboxylases. Adv. Synth. Catal., 357, 2015
3SEC	Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase complexed with pyrazofurin monophosphate 分子名称: (1S)-1,4-anhydro-1-(5-carbamoyl-4-hydroxy-1H-pyrazol-3-yl)-5-O-phosphono-D-ribitol, GLYCEROL, Orotidine 5'-phosphate decarboxylase 著者 Liu, Y, Kotra, L.P, Pai, E.F. 登録日 2011-06-10 公開日 2012-04-25 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal structure of methanococcus thermolithotrophicus orotidine 5'-monophosphate decarboxylase complexed with pyrazofurin monophosphate To be Published
4WIB	Crystal structure of Magnesium transporter MgtE 分子名称: CALCIUM ION, Magnesium transporter MgtE 著者 Takeda, H, Hattori, M, Nishizawa, T, Yamashita, K, Shah, S.T.A, Caffrey, M, Maturana, A.D, Ishitani, R, Nureki, O. 登録日 2014-09-25 公開日 2014-12-03 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural basis for ion selectivity revealed by high-resolution crystal structure of Mg(2+) channel MgtE Nat Commun, 5, 2014
6T5J	Structure of NUDT15 in complex with inhibitor TH1760 分子名称: 6-[4-(1~{H}-indol-5-ylcarbonyl)piperazin-1-yl]sulfonyl-3~{H}-1,3-benzoxazol-2-one, CHLORIDE ION, MAGNESIUM ION, ... 著者 Carter, M, Rehling, D, Desroses, M, Zhang, S.M, Hagenkort, A, Valerie, N.C.K, Helleday, T, Stenmark, P. 登録日 2019-10-16 公開日 2020-07-29 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Development of a chemical probe against NUDT15. Nat.Chem.Biol., 16, 2020
3K7Q	Crystal structure of substrate-bound 6-hydroxy-L-nicotine oxidase from Arthrobacter nicotinovorans 分子名称: (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(pentadecanoyloxy)methyl]ethyl (12E)-hexadeca-9,12-dienoate, 5-[(2S)-1-methylpyrrolidin-2-yl]pyridin-2-ol, 6-hydroxy-L-nicotine oxidase, ... 著者 Bourenkov, G.P, Kachalova, G.S, Bartunik, H.D. 登録日 2009-10-13 公開日 2010-01-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Crystal Structure Analysis of Free and Substrate-Bound 6-Hydroxy-l-Nicotine Oxidase from Arthrobacter nicotinovorans. J.Mol.Biol., 396, 2010
4WJ5	Structure of HLA-A2 in complex with an altered peptide ligands based on Mart-1 variant epitope 分子名称: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ... 著者 Celie, P.H.N, Rodenko, B, Ovaa, H. 登録日 2014-09-29 公開日 2014-10-29 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Altered Peptide Ligands Revisited: Vaccine Design through Chemically Modified HLA-A2-Restricted T Cell Epitopes. J Immunol., 193, 2014
3JTT	Cystal structure of Rhesus macaque MHC class I:Mamu-A*02 分子名称: Beta-2-microglobulin, MHC class I Mamu-A*02, peptide of Protein Nef 著者 Dai, L, Feng, Y, Qi, J, Gao, G.F. 登録日 2009-09-14 公開日 2010-09-15 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of Rhesus macaque MHC class I:Mamu-A*02 To be Published
8RG0	Structure of human eIF3 core from closed 48S translation initiation complex 分子名称: 18S rRNA, 40S ribosomal protein S13, 40S ribosomal protein S14, ... 著者 Petrychenko, V, Yi, S.-H, Liedtke, D, Peng, B.Z, Rodnina, M.V, Fischer, N. 登録日 2023-12-13 公開日 2024-08-14 最終更新日 2025-01-29 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural basis for translational control by the human 48S initiation complex. Nat.Struct.Mol.Biol., 32, 2025
8S30	Crystal structure of human PLK1 Polo-Box Domain in complex with Mis18 分子名称: Protein Mis18-alpha, Serine/threonine-protein kinase PLK1 著者 Jeyaprakash, A.A, Medina-Pritchard, B. 登録日 2024-02-19 公開日 2024-08-21 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 PLK1-mediated phosphorylation cascade activates Mis18 complex to ensure centromere inheritance. Science, 385, 2024
8S31	Crystal structure of human PLK1 Polo-Box Domain in complex with Mis18BP1 分子名称: Mis18-binding protein 1, Serine/threonine-protein kinase PLK1 著者 Jeyaprakash, A.A, Medina-Pritchard, B. 登録日 2024-02-19 公開日 2024-08-21 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (2.134 Å) 主引用文献 PLK1-mediated phosphorylation cascade activates Mis18 complex to ensure centromere inheritance. Science, 385, 2024
4NYO	The 1.8 Angstrom Crystal Structure of the Periplasmic Divalent Cation Tolerance Protein Cuta from Pyrococcus Horikoshii OT3 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, Divalent-cation tolerance protein CutA, ... 著者 Bagautdinov, B, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2013-12-11 公開日 2014-01-01 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 The structures of the CutA1 proteins from Thermus thermophilus and Pyrococcus horikoshii: characterization of metal-binding sites and metal-induced assembly ACTA CRYSTALLOGR.,SECT.F, 70, 2014
3BIT	Crystal structure of yeast Spt16 N-terminal Domain 分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, FACT complex subunit SPT16, ... 著者 VanDemark, A.P, Xin, H, McCullough, L, Rawlins, R, Bentley, S, Heroux, A, David, S.J, Hill, C.P, Formosa, T. 登録日 2007-11-30 公開日 2007-12-18 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural and functional analysis of the Spt16p N-terminal domain reveals overlapping roles of yFACT subunits. J.Biol.Chem., 283, 2008
5EL4	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Rozov, A, Demeshkina, N, Khusainov, I, Yusupov, M, Yusupova, G. 登録日 2015-11-04 公開日 2016-01-27 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Novel base-pairing interactions at the tRNA wobble position crucial for accurate reading of the genetic code. Nat Commun, 7, 2016
5EL7	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Rozov, A, Demeshkina, N, Khusainov, I, Yusupov, M, Yusupova, G. 登録日 2015-11-04 公開日 2016-01-27 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Novel base-pairing interactions at the tRNA wobble position crucial for accurate reading of the genetic code. Nat Commun, 7, 2016
5DFE	70S termination complex containing E. coli RF2 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Hoffer, E.D, Dunham, C.M. 登録日 2015-08-26 公開日 2016-10-12 最終更新日 2025-03-19 実験手法 X-RAY DIFFRACTION (3.09997559 Å) 主引用文献 Uniformity of Peptide Release Is Maintained by Methylation of Release Factors. Cell Rep, 17, 2016
5D8B	Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Svidritskiy, E, Korostelev, A.A. 登録日 2015-08-17 公開日 2015-10-14 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.63 Å) 主引用文献 Ribosome Structure Reveals Preservation of Active Sites in the Presence of a P-Site Wobble Mismatch. Structure, 23, 2015
5F8K	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Seefeldt, A.C, Graf, M, Perebaskine, N, Nguyen, F, Arenz, S, Mardirossian, M, Scocchi, M, Wilson, D.N, Innis, C.A. 登録日 2015-12-09 公開日 2016-02-03 最終更新日 2025-03-12 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure of the mammalian antimicrobial peptide Bac7(1-16) bound within the exit tunnel of a bacterial ribosome. Nucleic Acids Res., 44, 2016
6VJS	Escherichia coli RNA polymerase and ureidothiophene-2-carboxylic acid complex 分子名称: 3-{[benzyl(ethyl)carbamoyl]amino}-5-(4-phenoxyphenyl)thiophene-2-carboxylic acid, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Murakami, K.S, Molodtsov, V. 登録日 2020-01-17 公開日 2020-10-07 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (4.02 Å) 主引用文献 Evaluation of Bacterial RNA Polymerase Inhibitors in a Staphylococcus aureus -Based Wound Infection Model in SKH1 Mice. Acs Infect Dis., 6, 2020
5FDU	Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosome 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Seefeldt, A.C, Graf, M, Perebaskine, N, Nguyen, F, Arenz, S, Mardirossian, M, Scocchi, M, Wilson, D.N, Innis, C.A. 登録日 2015-12-16 公開日 2016-01-27 最終更新日 2025-03-12 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structure of the mammalian antimicrobial peptide Bac7(1-16) bound within the exit tunnel of a bacterial ribosome. Nucleic Acids Res., 44, 2016
5EL5	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Rozov, A, Demeshkina, N, Khusainov, I, Yusupov, M, Yusupova, G. 登録日 2015-11-04 公開日 2016-01-27 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Novel base-pairing interactions at the tRNA wobble position crucial for accurate reading of the genetic code. Nat Commun, 7, 2016
3HQX	Crystal structure of protein of unknown function (DUF1255,PF06865) from Acinetobacter sp. ADP1 分子名称: UPF0345 protein ACIAD0356 著者 Nocek, B, Hatzos, C, Freeman, L, Dauter, Z, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2009-06-08 公開日 2009-06-30 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 Crystal structure of protein of unknown function (DUF1255,PF06865) from Acinetobacter sp. ADP1 To be Published
5E81	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Rozov, A, Demeshkina, N, Khusainov, I, Yusupov, M, Yusupova, G. 登録日 2015-10-13 公開日 2016-01-27 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Novel base-pairing interactions at the tRNA wobble position crucial for accurate reading of the genetic code. Nat Commun, 7, 2016
5EL6	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycin 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Rozov, A, Demeshkina, N, Khusainov, I, Yusupov, M, Yusupova, G. 登録日 2015-11-04 公開日 2016-01-27 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Novel base-pairing interactions at the tRNA wobble position crucial for accurate reading of the genetic code. Nat Commun, 7, 2016

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