PDB: 222415 件ウェブページステータス検索Chemie searchBIRD

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6QSH	Crystal structure of the hybrid bioinorganic complex of Pizza6S linked by the 1:2 Ce-substituted Keggin 分子名称: 1:2 Ce-substituted Keggin, Pizza6S 著者 Noguchi, H, Vandebroek, L, Kamata, K, Tame, J.R.H, Van Meervelt, L, Parac-Vogt, T.N, Voet, A.R.D. 登録日 2019-02-20 公開日 2020-03-18 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Hybrid assemblies of a symmetric designer protein and polyoxometalates with matching symmetry. Chem.Commun.(Camb.), 56, 2020
2G58	Crystal structure of a complex of phospholipase A2 with a designed peptide inhibitor Dehydro-Ile-Ala-Arg-Ser at 0.98 A resolution 分子名称: (PHQ)IARS, Phospholipase A2 VRV-PL-VIIIa, SULFATE ION 著者 Prem Kumar, R, Singh, N, Somvanshi, R.K, Ethayathulla, A.S, Dey, S, Sharma, S, Kaur, P, Perbandt, M, Betzel, C, Singh, T.P. 登録日 2006-02-22 公開日 2006-03-28 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (0.98 Å) 主引用文献 Crystal structure of a complex of phospholipase A2 with a designed peptide inhibitor Dehydro-Ile-Ala-Arg-Ser at 0.98 A resolution To be Published
2G5L	Streptavidin in complex with Nanotag 分子名称: (FME)(ASP)(VAL)(GLU)(ALA)(TRP)(LEU), GLYCEROL, SULFATE ION, ... 著者 Perbandt, M, Bruns, O, Vallazza, M, Lamla, T, Betzel, C, Erdmann, V.A. 登録日 2006-02-23 公開日 2007-02-06 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.15 Å) 主引用文献 High resolution structure of Streptavidin in complex with a novel high affinity peptide tag mimicking the biotin binding motif To be Published
7Y4X	Crystal structure of sDscam Ig1 domain, isoform alpha7 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Down syndrome cell adhesion molecule 著者 Chen, Q, Yu, Y, Cheng, J. 登録日 2022-06-16 公開日 2023-05-24 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.952 Å) 主引用文献 Structural basis for the self-recognition of sDSCAM in Chelicerata. Nat Commun, 14, 2023
2G8F	B. halodurans RNase H catalytic domain E188A mutant in complex with Mg2+ and RNA/DNA hybrid (non-P nick at the active site) 分子名称: 5'-D(*AP*TP*GP*TP*CP*G)-3', 5'-R(*UP*CP*GP*AP*CP*A)-3', CHLORIDE ION, ... 著者 Nowotny, M, Yang, W. 登録日 2006-03-02 公開日 2006-04-25 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Stepwise analyses of metal ions in RNase H catalysis from substrate destabilization to product release. Embo J., 25, 2006
2G8U	B. halodurans RNase H catalytic domain D132N mutant in complex with Mg2+ and RNA/DNA hybrid (non-P nick at the active site) 分子名称: 5'-D(*AP*TP*GP*TP*CP*G)-3', 5'-R(*UP*CP*GP*AP*CP*A)-3', MAGNESIUM ION, ... 著者 Nowotny, M, Yang, W. 登録日 2006-03-03 公開日 2006-04-25 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Stepwise analyses of metal ions in RNase H catalysis from substrate destabilization to product release. Embo J., 25, 2006
7Y6O	Crystal structure of sDscam Ig1-3 domains, isoform alpha25 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Down Syndrome Cell Adhesion Molecules 著者 Chen, Q, Yu, Y, Cheng, J. 登録日 2022-06-21 公開日 2023-05-24 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.102 Å) 主引用文献 Structural basis for the self-recognition of sDSCAM in Chelicerata. Nat Commun, 14, 2023
2GEW	Atomic resolution structure of cholesterol oxidase @ pH 9.0 (Streptomyces sp. SA-COO) 分子名称: Cholesterol oxidase, FLAVIN-ADENINE DINUCLEOTIDE, OXYGEN MOLECULE, ... 著者 Lyubimov, A.Y, Vrielink, A. 登録日 2006-03-20 公開日 2006-05-02 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (0.97 Å) 主引用文献 Atomic resolution crystallography reveals how changes in pH shape the protein microenvironment. Nat.Chem.Biol., 2, 2006
4V6B	Crystal structure of human ferritin Phe167SerfsX26 mutant. 分子名称: CALCIUM ION, Ferritin 著者 Hurley, T.D, Vidal, R. 登録日 2009-06-19 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Unraveling of the E-helices and disruption of 4-fold pores are associated with iron mishandling in a mutant ferritin causing neurodegeneration J.Biol.Chem., 285, 2010
4V7P	Recognition of the amber stop codon by release factor RF1. 分子名称: 16S rRNA (1504-MER), 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Korostelev, A, Zhu, J, Asahara, H, Noller, H.F. 登録日 2010-04-29 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.62 Å) 主引用文献 Recognition of the amber UAG stop codon by release factor RF1. Embo J., 29, 2010
4V99	The Crystallographic Structure of Panicum Mosaic Virus 分子名称: 5'-R(P*UP*UP*AP*AP*UP*AP*UP*UP*UP*UP*UP*AP*UP*UP*UP*UP*U)-3', CALCIUM ION, Capsid protein 著者 Makino, D.L, Larson, S.B, McPherson, A. 登録日 2012-07-04 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 The crystallographic structure of Panicum Mosaic Virus (PMV). J.Struct.Biol., 181, 2013
4V6H	Crystal structure of succinate-semialdehyde dehydrogenase from Burkholderia pseudomallei 分子名称: Succinate-semialdehyde dehydrogenase (NADP+) 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2009-07-24 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal structure of succinate-semialdehyde dehydrogenase from Burkholderia pseudomallei To be Published
7Q8H	Peptide EVCKKKK in complex with human cathepsin V C25A mutant 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Cathepsin L2, ... 著者 Loboda, J, Sosnowski, P, Tusar, L, Vidmar, R, Vizovisek, M, Horvat, J, Kosec, G, Impens, F, Demol, H, Turk, B, Gevaert, K, Turk, D. 登録日 2021-11-11 公開日 2022-11-23 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Proteomic data and structure analysis combined reveal interplay of structural rigidity and flexibility on selectivity of cysteine cathepsins. Commun Biol, 6, 2023
1MFP	E. coli Enoyl Reductase in complex with NAD and SB611113 分子名称: (E)-N-METHYL-N-(1-METHYL-1H-INDOL-3-YLMETHYL)-3-(7-OXO-5,6,7,8-TETRAHYDRO-[1,8]NAPHTHYRIDIN-3-YL)-ACRYLAMIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, ... 著者 Seefeld, M.A, Miller, W.H, Newlander, K.A, Burgess, W.J, DeWolf Jr, W.E, Elkins, P.A, Head, M.S, Jakas, D.R, Janson, C.A, Keller, P.M, Manley, P.J, Moore, T.D, Payne, D.J, Pearson, S, Polizzi, B.J, Qiu, X, Rittenhouse, S.F, Uzinskas, I.N, Wallis, N.G, Huffman, W.F. 登録日 2002-08-13 公開日 2003-05-06 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.33 Å) 主引用文献 Indole Naphthyridinones as Inhibitors of Bacterial Enoyl-ACP Reductases FabI and FabK J.MED.CHEM., 46, 2003
5VFP	Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome 分子名称: 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 11, 26S proteasome non-ATPase regulatory subunit 12, ... 著者 Zhu, Y, Wang, W.L, Yu, D, Ouyang, Q, Lu, Y, Mao, Y. 登録日 2017-04-09 公開日 2018-07-18 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome. Nat Commun, 9, 2018
7Q9H	Peptide LLKAVAEKQ in complex with human cathepsin V C25A mutant 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Cathepsin L2, ... 著者 Loboda, J, Sosnowski, P, Tusar, L, Vidmar, R, Vizovisek, M, Horvat, J, Kosec, G, Impens, F, Demol, H, Turk, B, Gevaert, K, Turk, D. 登録日 2021-11-12 公開日 2022-11-23 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Proteomic data and structure analysis combined reveal interplay of structural rigidity and flexibility on selectivity of cysteine cathepsins. Commun Biol, 6, 2023
1MG3	MUTATION OF ALPHA PHE55 OF METHYLAMINE DEHYDROGENASE ALTERS THE REORGANIZATION ENERGY AND ELECTRONIC COUPLING FOR ITS ELECTRON TRANSFER REACTION WITH AMICYANIN 分子名称: Amicyanin, COPPER (II) ION, CYTOCHROME C-L, ... 著者 Sun, D, Chen, Z.W, Mathews, F.S, Davidson, V.L. 登録日 2002-08-14 公開日 2002-12-11 最終更新日 2021-10-27 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 MUTATION OF ALPHA PHE55 OF METHYLAMINE DEHYDROGENASE ALTERS THE REORGANIZATION ENERGY AND ELECTRONIC COUPLING FOR ITS ELECTRON TRANSFER REACTION WITH AMICYANIN Biochemistry, 41, 2002
1MHW	Design of non-covalent inhibitors of human cathepsin L. From the 96-residue proregion to optimized tripeptides 分子名称: 4-biphenylacetyl-Cys-(D)Arg-Tyr-N-(2-phenylethyl) amide, Cathepsin L 著者 Chowdhury, S, Sivaraman, J, Wang, J, Devanathan, G, Lachance, P, Qi, H, Menard, R, Lefebvre, J, Konishi, Y, Cygler, M, Sulea, T, Purisima, E.O. 登録日 2002-08-21 公開日 2002-12-11 最終更新日 2017-10-11 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Design of non-covalent inhibitors of human cathepsin L. From the 96-residue proregion to optimized tripeptides J.Med.Chem., 45, 2002
5D7I	Structure of human MR1-Ac-6-FP in complex with human MAIT M33.64 TCR 分子名称: Beta-2-microglobulin, GLYCEROL, M33.64 TCR Alpha Chain, ... 著者 Keller, A.N, Woolley, R.E, Rossjohn, J. 登録日 2015-08-14 公開日 2016-01-27 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Diversity of T Cells Restricted by the MHC Class I-Related Molecule MR1 Facilitates Differential Antigen Recognition. Immunity, 44, 2016
1MDZ	Crystal structure of ArnB aminotransferase with cycloserine and pyridoxal 5' phosphate 分子名称: ArnB aminotransferase, D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE, PYRIDOXAL-5'-PHOSPHATE 著者 Noland, B.W, Newman, J.M, Hendle, J, Badger, J, Christopher, J.A, Tresser, J, Buchanan, M.D, Wright, T, Rutter, M.E, Sanderson, W.E, Muller-Dieckmann, H.-J, Gajiwala, K.S, Sauder, J.M, Buchanan, S.G. 登録日 2002-08-07 公開日 2002-12-11 最終更新日 2018-12-26 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 Structural studies of Salmonella typhimurium ArnB (PmrH) aminotransferase: A 4-amino-4-deoxy-L-arabinose lipopolysaccharide modifying enzyme Structure, 10, 2002
7Q8D	Peptide TRESEDLE in complex with human cathepsin V C25A mutant 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ASP-LEU-GLU(AMI), CHLORIDE ION, ... 著者 Loboda, J, Sosnowski, P, Tusar, L, Vidmar, R, Vizovisek, M, Horvat, J, Kosec, G, Impens, F, Demol, H, Turk, B, Gevaert, K, Turk, D. 登録日 2021-11-11 公開日 2022-11-23 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Proteomic data and structure analysis combined reveal interplay of structural rigidity and flexibility on selectivity of cysteine cathepsins. Commun Biol, 6, 2023
1MF1	Structure of the Recombinant Mouse-Muscle Adenylosuccinate Synthetase Complexed with AMP 分子名称: ACETATE ION, ADENOSINE MONOPHOSPHATE, Adenylosuccinate Synthetase 著者 Iancu, C.V, Borza, T, Fromm, H.J, Honzatko, R.B. 登録日 2002-08-09 公開日 2002-10-30 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Feedback inhibition and product complexes of recombinant mouse muscle adenylosuccinate synthetase. J.Biol.Chem., 277, 2002
5D5R	Horse-heart myoglobin - deoxy state 分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE 著者 Barends, T, Schlichting, I. 登録日 2015-08-11 公開日 2015-09-16 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation. Science, 350, 2015
5D5X	Crystal structure of Chaetomium thermophilum Skn7 with SSRE DNA 分子名称: Putative transcription factor, SSRE DNA strand 1, SSRE DNA strand 2 著者 Neudegger, T, Verghese, J, Hayer-Hartl, M, Hartl, F.U, Bracher, A. 登録日 2015-08-11 公開日 2015-12-30 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of human heat-shock transcription factor 1 in complex with DNA. Nat.Struct.Mol.Biol., 23, 2016
7Q8G	Peptide ALAASS in complex with human cathepsin V C25S mutant 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ALAASS Peptide, CHLORIDE ION, ... 著者 Loboda, J, Sosnowski, P, Tusar, L, Vidmar, R, Vizovisek, M, Horvat, J, Kosec, G, Impens, F, Demol, H, Turk, B, Gevaert, K, Turk, D. 登録日 2021-11-11 公開日 2022-11-23 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 Proteomic data and structure analysis combined reveal interplay of structural rigidity and flexibility on selectivity of cysteine cathepsins. Commun Biol, 6, 2023

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