PDB: 95574 件ウェブページステータス検索Chemie searchBIRD

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1L56	ANALYSIS OF THE INTERACTION BETWEEN CHARGED SIDE CHAINS AND THE ALPHA-HELIX DIPOLE USING DESIGNED THERMOSTABLE MUTANTS OF PHAGE T4 LYSOZYME 分子名称: BETA-MERCAPTOETHANOL, T4 LYSOZYME 著者 Nicholson, H, Matthews, B.W. 登録日 1991-05-06 公開日 1991-10-15 最終更新日 2017-11-29 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Analysis of the effectiveness of proline substitutions and glycine replacements in increasing the stability of phage T4 lysozyme. Biopolymers, 32, 1992
5CDW	Crystal Structure Analysis of a mutant Grb2 SH2 domain (W121G) with a pYVNV peptide 分子名称: Growth factor receptor-bound protein 2, SER-PTR-VAL-ASN-VAL-GLN 著者 Papaioannou, D, Geibel, S, Kunze, M, Kay, C, Waksman, G. 登録日 2015-07-05 公開日 2016-05-25 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.602 Å) 主引用文献 Structural and biophysical investigation of the interaction of a mutant Grb2 SH2 domain (W121G) with its cognate phosphopeptide. Protein Sci., 25, 2016
6UGB	C3 symmetric peptide design number 2, Baby Basil 分子名称: C3 symmetric peptide design number 2, Baby Basil, CHLORIDE ION, ... 著者 Mulligan, V.K, Kang, C.S, Antselovich, I, Sawaya, M.R, Yeates, T.O, Baker, D. 登録日 2019-09-26 公開日 2020-12-02 実験手法 X-RAY DIFFRACTION (0.95 Å) 主引用文献 Computational design of mixed chirality peptide macrocycles with internal symmetry. Protein Sci., 29, 2020
3TGJ	S195A TRYPSINOGEN COMPLEXED WITH BOVINE PANCREATIC TRYPSIN INHIBITOR (BPTI) 分子名称: BOVINE PANCREATIC TRYPSIN INHIBITOR, CALCIUM ION, SULFATE ION, ... 著者 Pasternak, A, Ringe, D, Hedstrom, L. 登録日 1998-07-16 公開日 1998-12-23 最終更新日 2021-11-03 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Comparison of Anionic and Cationic Trypsinogens: The Anionic Activation Domain is More Flexible in Solution and Differs in its Mode of Bpti Binding in the Crystal Structure Protein Sci., 8, 1999
5GDS	HIRUNORMS ARE TRUE HIRUDIN MIMETICS. THE CRYSTAL STRUCTURE OF HUMAN ALPHA-THROMBIN:HIRUNORM V COMPLEX 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA-THROMBIN, HIRUNORM V 著者 De Simone, G, Lombardi, A, Galdiero, S, Nastri, F, Della Morte, R, Staiano, N, Pedone, C, Bolognesi, M, Pavone, V. 登録日 1997-07-17 公開日 1998-01-21 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Hirunorms are true hirudin mimetics. The crystal structure of human alpha-thrombin-hirunorm V complex. Protein Sci., 7, 1998
5LRT	Structure of the Deamidase-Depupylase Dop of the Prokaryotic Ubiquitin-like Modification Pathway in Complex with ADP and Phosphate 分子名称: ADENOSINE-5'-DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, Depupylase, ... 著者 Bolten, M, Vahlensieck, C, Lipp, C, Leibundgut, M, Ban, N, Weber-Ban, E. 登録日 2016-08-19 公開日 2017-02-01 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Depupylase Dop Requires Inorganic Phosphate in the Active Site for Catalysis. J. Biol. Chem., 292, 2017
5F16	CTA-modified hen egg-white lysozyme 分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION 著者 McGlone, C, Nix, J.C, Page, R.C. 登録日 2015-11-30 公開日 2016-02-24 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Investigating the Impact of Polymer Functional Groups on the Stability and Activity of Lysozyme-Polymer Conjugates. Biomacromolecules, 17, 2016
6SYE	Crystal structure of orthorhombic lysozyme in presence of the dye bromophenol blue at pH 7.0 分子名称: CHLORIDE ION, Lysozyme C, bromophenol blue 著者 Camara-Artigas, A, Plaza-Garrido, M, Salinas-Garcia, M.C. 登録日 2019-09-27 公開日 2020-09-09 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (0.97 Å) 主引用文献 Lysozyme crystals dyed with bromophenol blue: where has the dye gone? Acta Crystallogr D Struct Biol, 76, 2020
5FIR	Crystal structure of C. elegans XRN2 in complex with the XRN2-binding domain of PAXT-1 分子名称: 5'-3' EXORIBONUCLEASE 2 HOMOLOG, PAXT-1, SULFATE ION 著者 Richter, H, Katic, I, Gut, H, Grosshans, H. 登録日 2015-10-02 公開日 2016-01-20 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.836 Å) 主引用文献 Structural Basis and Function of Xrn2-Binding by Xtb Domains Nat.Struct.Mol.Biol., 23, 2016
5F9J	Structure of HLA-A2:01 with peptide Y9L 分子名称: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ... 著者 Remesh, S.G, Zajonc, D.M. 登録日 2015-12-09 公開日 2016-12-21 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 Unconventional Peptide Presentation by Major Histocompatibility Complex (MHC) Class I Allele HLA-A*02:01: BREAKING CONFINEMENT. J. Biol. Chem., 292, 2017
5FA3	Structure of HLA-A2:01 with peptide G9V 分子名称: Beta-2-microglobulin, G9V, GLYCEROL, ... 著者 Zajonc, D.M, Remesh, S.G. 登録日 2015-12-10 公開日 2016-12-21 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Unconventional Peptide Presentation by Major Histocompatibility Complex (MHC) Class I Allele HLA-A*02:01: BREAKING CONFINEMENT. J. Biol. Chem., 292, 2017
6SYC	Crystal structure of the lysozyme in presence of bromophenol blue at pH 6.5 分子名称: CHLORIDE ION, IMIDAZOLE, Lysozyme, ... 著者 Camara-Artigas, A, Plaza-Garrido, M, Salinas-Garcia, M.C. 登録日 2019-09-27 公開日 2020-09-09 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 Lysozyme crystals dyed with bromophenol blue: where has the dye gone? Acta Crystallogr D Struct Biol, 76, 2020
6T41	CDK8/Cyclin C in complex with N-(4-chlorobenzyl)isoquinolin-4-amine 分子名称: 1,2-ETHANEDIOL, Cyclin-C, Cyclin-dependent kinase 8, ... 著者 Schneider, E.V, Maskos, K, Huber, R, Kuhn, C.-D. 登録日 2019-10-11 公開日 2020-01-01 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 A precisely positioned MED12 activation helix stimulates CDK8 kinase activity. Proc.Natl.Acad.Sci.USA, 117, 2020
5EXA	Small-molecule stabilization of the 14-3-3/Gab2 PPI interface 分子名称: 14-3-3 protein zeta/delta, BENZOIC ACID, Fusicoccin A-THF derivative, ... 著者 Bier, D, Ottmann, C. 登録日 2015-11-23 公開日 2016-05-04 最終更新日 2018-12-19 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Small-Molecule Stabilization of the 14-3-3/Gab2 Protein-Protein Interaction (PPI) Interface. Chemmedchem, 11, 2016
6TWG	Solution structure of antimicrobial peptide, crabrolin Plus in the presence of Lipopolysaccharide 分子名称: Crabrolin Plus, mutant of Crabrolin peptide 著者 Cantini, F, Bouchemal, N, Savarin, P, Sette, M. 登録日 2020-01-13 公開日 2020-07-22 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Effect of positive charges in the structural interaction of crabrolin isoforms with lipopolysaccharide. J.Pept.Sci., 26, 2020
5GCH	CHEMISTRY OF CAGED ENZYMES /II$. PHOTOACTIVATION OF INHIBITED CHYMOTRYPSIN 分子名称: GAMMA-CHYMOTRYPSIN A 著者 Stoddard, B.L, Ringe, D, Petsko, G.A. 登録日 1989-09-25 公開日 1990-10-15 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Photolysis and deacylation of inhibited chymotrypsin. Biochemistry, 29, 1990
5AY8	Crystal structure of human nucleosome containing H3.Y 分子名称: CHLORIDE ION, DNA (146-MER), H3.Y, ... 著者 Kujirai, T, Horikoshi, N, Sato, K, Maehara, K, Machida, S, Osakabe, A, Kimura, H, Ohkawa, Y, Kurumizaka, H. 登録日 2015-08-10 公開日 2016-04-06 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure and function of human histone H3.Y nucleosome Nucleic Acids Res., 44, 2016
5LXM	Crystal structure of Aurora-A bound to a hydrocarbon-stapled proteomimetic of TPX2 分子名称: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, ... 著者 McIntyre, P.J, Bayliss, R. 登録日 2016-09-22 公開日 2016-11-02 最終更新日 2024-09-04 実験手法 X-RAY DIFFRACTION (2.08 Å) 主引用文献 A TPX2 Proteomimetic Has Enhanced Affinity for Aurora-A Due to Hydrocarbon Stapling of a Helix. ACS Chem. Biol., 11, 2016
6UX5	Structure of acrorhagin I from the sea anemone Actinia equina 分子名称: U-actitoxin-Aeq5a 著者 Krishnarjuna, B, Sunanda, P, Norton, R.S. 登録日 2019-11-06 公開日 2020-11-18 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 A disulfide-stabilised helical hairpin fold in acrorhagin I: An emerging structural motif in peptide toxins. J.Struct.Biol., 213, 2020
3SGB	STRUCTURE OF THE COMPLEX OF STREPTOMYCES GRISEUS PROTEASE B AND THE THIRD DOMAIN OF THE TURKEY OVOMUCOID INHIBITOR AT 1.8 ANGSTROMS RESOLUTION 分子名称: PROTEINASE B (SGPB), TURKEY OVOMUCOID INHIBITOR (OMTKY3) 著者 Read, R.J, Fujinaga, M, Sielecki, A.R, James, M.N.G. 登録日 1983-01-21 公開日 1983-07-12 最終更新日 2017-11-29 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of the complex of Streptomyces griseus protease B and the third domain of the turkey ovomucoid inhibitor at 1.8-A resolution. Biochemistry, 22, 1983
3U92	Crystal structure of the GluK3 ligand binding domain complex with kainate and zinc: P2221 form 分子名称: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE, CHLORIDE ION, Glutamate receptor, ... 著者 Kumar, J, Mayer, M.L. 登録日 2011-10-17 公開日 2012-09-26 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Zinc Potentiates GluK3 Glutamate Receptor Function by Stabilizing the Ligand Binding Domain Dimer Interface. Neuron, 76, 2012
6SJG	Cryo-EM structure of the RecBCD no Chi negative control complex 分子名称: Forked DNA substrate, RecBCD enzyme subunit RecB, RecBCD enzyme subunit RecC, ... 著者 Cheng, K, Wilkinson, M, Wigley, D.B. 登録日 2019-08-13 公開日 2020-01-01 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 A conformational switch in response to Chi converts RecBCD from phage destruction to DNA repair. Nat.Struct.Mol.Biol., 27, 2020
5BTA	Crystal structure of a topoisomerase II complex 分子名称: 1-cyclopropyl-6-fluoro-8-methoxy-7-[(4aS,7aS)-octahydro-6H-pyrrolo[3,4-b]pyridin-6-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid, DNA gyrase subunit A, DNA gyrase subunit B, ... 著者 Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M. 登録日 2015-06-02 公開日 2016-03-02 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis. Proc.Natl.Acad.Sci.USA, 113, 2016
5BTN	Crystal structure of a topoisomerase II complex 分子名称: 1-cyclopropyl-6-fluoro-8-methyl-7-[(4aS,7aS)-octahydro-6H-pyrrolo[3,4-b]pyridin-6-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid, DNA gyrase subunit A, DNA gyrase subunit B, ... 著者 Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M. 登録日 2015-06-03 公開日 2016-03-02 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis. Proc.Natl.Acad.Sci.USA, 113, 2016
5BS8	Crystal structure of a topoisomerase II complex 分子名称: 1-cyclopropyl-6-fluoro-8-methoxy-7-[(4aS,7aS)-octahydro-6H-pyrrolo[3,4-b]pyridin-6-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid, DNA gyrase subunit A, DNA gyrase subunit B, ... 著者 Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M. 登録日 2015-06-01 公開日 2016-03-02 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.399 Å) 主引用文献 Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis. Proc.Natl.Acad.Sci.USA, 113, 2016

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