5AY8

Crystal structure of human nucleosome containing H3.Y

Summary for 5AY8

DescriptorH3.Y, Histone H4, Histone H2A type 1-B/E, ... (8 entities in total)
Functional Keywordshistone fold dna binding nucleus, dna binding protein-dna complex, dna binding protein/dna
Biological sourceHomo sapiens (Human)
Total number of polymer chains10
Total molecular weight202775.19
Authors
Kujirai, T.,Horikoshi, N.,Sato, K.,Maehara, K.,Machida, S.,Osakabe, A.,Kimura, H.,Ohkawa, Y.,Kurumizaka, H. (deposition date: 2015-08-10, release date: 2016-04-06, Last modification date: 2020-02-26)
Primary citation
Kujirai, T.,Horikoshi, N.,Sato, K.,Maehara, K.,Machida, S.,Osakabe, A.,Kimura, H.,Ohkawa, Y.,Kurumizaka, H.
Structure and function of human histone H3.Y nucleosome
Nucleic Acids Res., 44:6127-6141, 2016
PubMed: 27016736 (PDB entries with the same primary citation)
DOI: 10.1093/nar/gkw202
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.8 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.218110 1.5% 0.6%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload
170172
PDB entries from 2020-10-21