PDB: 1848 件ウェブページステータス検索Chemie searchBIRD

---

4FWT	Complex structure of viral RNA polymerase form III 分子名称: CALCIUM ION, Elongation factor Ts, Elongation factor Tu, ... 著者 Takeshita, D, Tomita, K. 登録日 2012-07-02 公開日 2012-08-08 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Mechanism for template-independent terminal adenylation activity of Q beta replicase Structure, 20, 2012
6P1H	Cryo-EM Structure of DNA Polymerase Delta Holoenzyme 分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (30-MER), ... 著者 Jain, R, Rice, W, Aggarwal, A.K. 登録日 2019-05-19 公開日 2019-10-02 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Cryo-EM structure and dynamics of eukaryotic DNA polymerase delta holoenzyme. Nat.Struct.Mol.Biol., 26, 2019
4FRG	Crystal structure of the cobalamin riboswitch aptamer domain 分子名称: Hydroxocobalamin, IRIDIUM (III) ION, MAGNESIUM ION, ... 著者 Reyes, F.E, Johnson, J.E, Polaski, J.T, Batey, R.T. 登録日 2012-06-26 公開日 2012-10-17 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 B12 cofactors directly stabilize an mRNA regulatory switch. Nature, 492, 2012
3Q36	Crystal structure of the 4Fe-4S cluster domain of human DNA primase large subunit 分子名称: DNA primase large subunit, FE (III) ION, IRON/SULFUR CLUSTER 著者 Agarkar, V.B, Babayeva, N.D, Tahirov, T.H. 登録日 2010-12-21 公開日 2011-04-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure of the C-terminal domain of human DNA primase large subunit: Implications for the mechanism of the primase - polymerase alpha switch. Cell Cycle, 10, 2011
8KG9	Yeast replisome in state III 分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 45, DNA (61-mer), ... 著者 Dang, S, Zhai, Y, Feng, J, Yu, D, Xu, Z. 登録日 2023-08-17 公開日 2023-12-06 実験手法 ELECTRON MICROSCOPY (4.52 Å) 主引用文献 Synergism between CMG helicase and leading strand DNA polymerase at replication fork. Nat Commun, 14, 2023
2LTO	TDRD3 complex 分子名称: DNA-directed RNA polymerase II subunit RPB1, Tudor domain-containing protein 3 著者 Sikorsky, T. 登録日 2012-05-30 公開日 2013-01-16 最終更新日 2023-11-15 実験手法 SOLUTION NMR 主引用文献 Recognition of asymmetrically dimethylated arginine by TDRD3. Nucleic Acids Res., 40, 2012
6XQB	SARS-CoV-2 RdRp/RNA complex 分子名称: MAGNESIUM ION, Non-structural protein 7, Non-structural protein 8, ... 著者 Liu, B, Shi, W, Yang, Y. 登録日 2020-07-09 公開日 2020-07-29 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of SARS-CoV-2 RdRp/RNA complex at 3.4 Angstroms resolution To Be Published
6VEM	Structure of RNA octamer 分子名称: COBALT HEXAMMINE(III), Modified Octamer RNA 著者 Pallan, P.S, Egli, M. 登録日 2020-01-02 公開日 2020-11-18 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.56 Å) 主引用文献 Synthesis, chirality-dependent conformational and biological properties of siRNAs containing 5'-(R)- and 5'-(S)-C-methyl-guanosine. Nucleic Acids Res., 48, 2020
4R71	Structure of the Qbeta holoenzyme complex in the P1211 crystal form 分子名称: 30S ribosomal protein S1, Elongation factor Ts, Elongation factor Tu, ... 著者 Gytz, H, Seweryn, P, Kutlubaeva, Z, Chetverin, A.B, Brodersen, D.E, Knudsen, C.R. 登録日 2014-08-26 公開日 2015-09-23 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.21 Å) 主引用文献 Structural basis for RNA-genome recognition during bacteriophage Q beta replication. Nucleic Acids Res., 43, 2015
6VMY	Structure of the B. subtilis cobalamin riboswitch 分子名称: Adenosylcobalamin, B. subtilis cobalamin riboswitch, COBALT HEXAMMINE(III), ... 著者 Chan, C.W, Mondragon, A. 登録日 2020-01-28 公開日 2020-06-10 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 Crystal structure of an atypical cobalamin riboswitch reveals RNA structural adaptability as basis for promiscuous ligand binding. Nucleic Acids Res., 48, 2020
3AX1	Molecular insights into miRNA processing by Arabidopsis Serrate 分子名称: Serrate RNA effector molecule, ZINC ION 著者 Yuan, Y.A, Machida, S, Chen, H.Y. 登録日 2011-03-28 公開日 2011-07-13 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.74 Å) 主引用文献 Molecular insights into miRNA processing by Arabidopsis thaliana SERRATE Nucleic Acids Res., 39, 2011
8T1R	Crystal structure of human CPSF73 catalytic segment in complex with compound 2 分子名称: 3-[7,7-bis(oxidanyl)-8-oxa-7-boranuidabicyclo[4.3.0]nona-1,3,5-trien-5-yl]-~{N}-[3-(3-methoxyphenyl)phenyl]propanamide, CHLORIDE ION, Cleavage and polyadenylation specificity factor subunit 3, ... 著者 Huang, J, Tong, L. 登録日 2023-06-02 公開日 2023-11-08 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Anticancer benzoxaboroles block pre-mRNA processing by directly inhibiting CPSF3. Cell Chem Biol, 31, 2024
8T1Q	Crystal structure of human CPSF73 catalytic segment in complex with compound 1 分子名称: 3-[7,7-bis(oxidanyl)-8-oxa-7-boranuidabicyclo[4.3.0]nona-1,3,5-trien-5-yl]-~{N}-[3-(4-ethanoylphenyl)phenyl]propanamide, CHLORIDE ION, Cleavage and polyadenylation specificity factor subunit 3, ... 著者 Huang, J, Tong, L. 登録日 2023-06-02 公開日 2023-11-08 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Anticancer benzoxaboroles block pre-mRNA processing by directly inhibiting CPSF3. Cell Chem Biol, 31, 2024
6Y83	Capsid structure of Leishmania RNA virus 1 分子名称: Capsid protein 著者 Prochazkova, M, Fuzik, T, Grybtchuk, D, Falginella, F, Podesvova, L, Yurchenko, V, Vacha, R, Plevka, P. 登録日 2020-03-03 公開日 2020-11-11 最終更新日 2022-03-30 実験手法 ELECTRON MICROSCOPY (3.65 Å) 主引用文献 Capsid Structure of Leishmania RNA Virus 1. J.Virol., 95, 2021
4KL5	Crystal structure of NpuDnaE intein 分子名称: CITRIC ACID, DNA polymerase III, alpha subunit, ... 著者 Aranko, A.S, Oeemig, J.S, Kajander, T, Iwai, H. 登録日 2013-05-07 公開日 2013-09-04 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 Intermolecular domain swapping induces intein-mediated protein alternative splicing. Nat.Chem.Biol., 9, 2013
4LCK	Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA 分子名称: MAGNESIUM ION, Ribosomal protein YbxF, STRONTIUM ION, ... 著者 Zhang, J, Ferre-D'Amare, A.R. 登録日 2013-06-21 公開日 2013-07-31 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA. Nature, 500, 2013
7Z90	Leishmania RNA virus 1 virion 分子名称: Capsid protein,Major capsid protein 著者 Prochazkova, M, Plevka, P. 登録日 2022-03-19 公開日 2022-11-23 実験手法 ELECTRON MICROSCOPY (3.88 Å) 主引用文献 Virion structure of Leishmania RNA virus 1. Virology, 577, 2022
7TNY	Cryo-EM structure of RIG-I in complex with p2dsRNA 分子名称: Antiviral innate immune response receptor RIG-I, ZINC ION, p2dsRNA 著者 Wang, W, Pyle, A.M. 登録日 2022-01-22 公開日 2022-11-02 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 The RIG-I receptor adopts two different conformations for distinguishing host from viral RNA ligands. Mol.Cell, 82, 2022
7TNX	Cryo-EM structure of RIG-I in complex with p3dsRNA 分子名称: Antiviral innate immune response receptor RIG-I, ZINC ION, p3dsRNAa, ... 著者 Wang, W, Pyle, A.M. 登録日 2022-01-22 公開日 2022-11-02 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.54 Å) 主引用文献 The RIG-I receptor adopts two different conformations for distinguishing host from viral RNA ligands. Mol.Cell, 82, 2022
7TO0	Cryo-EM structure of RIG-I in complex with OHdsRNA 分子名称: Antiviral innate immune response receptor RIG-I, OHdsRNA, ZINC ION 著者 Wang, W, Pyle, A.M. 登録日 2022-01-22 公開日 2022-11-02 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 The RIG-I receptor adopts two different conformations for distinguishing host from viral RNA ligands. Mol.Cell, 82, 2022
7TNZ	Cryo-EM structure of RIG-I in complex with p1dsRNA 分子名称: Antiviral innate immune response receptor RIG-I, ZINC ION, p1dsRNA 著者 Wang, W, Pyle, A.M. 登録日 2022-01-22 公開日 2022-11-02 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.54 Å) 主引用文献 The RIG-I receptor adopts two different conformations for distinguishing host from viral RNA ligands. Mol.Cell, 82, 2022
2KTZ	Inhibitor Induced Structural Change in the HCV IRES Domain IIa RNA 分子名称: (7R)-7-[(dimethylamino)methyl]-1-[3-(dimethylamino)propyl]-7,8-dihydro-1H-furo[3,2-e]benzimidazol-2-amine, HCV IRES Domain IIa RNA 著者 Paulsen, R.B, Seth, P.P, Swayze, E.E, Griffey, R.H, Skalicky, J.J, Cheatham III, T.E, Davis, D.R. 登録日 2010-02-10 公開日 2010-04-28 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Inhibitor-induced structural change in the HCV IRES domain IIa RNA. Proc.Natl.Acad.Sci.USA, 107, 2010
2KU0	Inhibitor Induced Structural Change in the HCV IRES Domain IIa RNA 分子名称: (7S)-7-[(dimethylamino)methyl]-1-[3-(dimethylamino)propyl]-7,8-dihydro-1H-furo[3,2-e]benzimidazol-2-amine, HCV IRES Domain IIa RNA 著者 Paulsen, R.B, Seth, P.P, Swayze, E.E, Griffey, R.H, Skalicky, J.J, Cheatham III, T.E, Davis, D.R. 登録日 2010-02-10 公開日 2010-04-28 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Inhibitor-induced structural change in the HCV IRES domain IIa RNA. Proc.Natl.Acad.Sci.USA, 107, 2010
6D3P	Crystal structure of an exoribonuclease-resistant RNA from Sweet clover necrotic mosaic virus (SCNMV) 分子名称: IRIDIUM HEXAMMINE ION, RNA (45-MER) 著者 Steckelberg, A.-L, Akiyama, B.M, Costantino, D.A, Sit, T.L, Nix, J.C, Kieft, J.S. 登録日 2018-04-16 公開日 2018-06-20 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 A folded viral noncoding RNA blocks host cell exoribonucleases through a conformationally dynamic RNA structure. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3NPN	Structure of the s-adenosylhomocysteine riboswitch at 3.0A 分子名称: S-ADENOSYL-L-HOMOCYSTEINE, S-ADENOSYLHOMOCYSTEINE RIBOSWITCH 著者 Reyes, F.E, Edwards, A.E, Batey, R.T. 登録日 2010-06-28 公開日 2010-10-06 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.792 Å) 主引用文献 Structural basis for recognition of S-adenosylhomocysteine by riboswitches. Rna, 16, 2010

<21222324252627282930313233343536>