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4K6R
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BU of 4k6r by Molmil
Crystal structure of GlmU in complex with ATP
分子名称: 2-acetamido-2-deoxy-1-O-phosphono-alpha-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional protein GlmU, ...
著者Vithani, N, Prakash, B.
登録日2013-04-16
公開日2014-04-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献GlmU (N-acetylglucosamine-1-phosphate uridyltransferase) bound to three magnesium ions and ATP at the active site.
Acta Crystallogr.,Sect.F, 70, 2014
4Z20
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BU of 4z20 by Molmil
Crystal Structure of Meganuclease I-SmaMI Bound to Uncleaveable DNA with a TTGT Central Four
分子名称: CALCIUM ION, DNA (26-MER), GLYCEROL, ...
著者Hallinan, J.P, Stoddard, B.L.
登録日2015-03-27
公開日2016-03-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Indirect DNA Sequence Recognition and Its Impact on Nuclease Cleavage Activity.
Structure, 24, 2016
4ETU
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BU of 4etu by Molmil
Crystal structure of rabbit ryanodine receptor 1 mutant R2939S
分子名称: GLYCEROL, Ryanodine receptor 1
著者Yuchi, Z, Lau, K, Van Petegem, F.
登録日2012-04-24
公開日2012-06-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Disease mutations in the ryanodine receptor central region: crystal structures of a phosphorylation hot spot domain.
Structure, 20, 2012
4KSK
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BU of 4ksk by Molmil
Gumby/Fam105B in complex with ubiquitin
分子名称: Polyubiquitin-C, Protein FAM105B, SULFATE ION
著者Ceccarelli, D.F, Juang, Y.-C, Sicheri, F.
登録日2013-05-17
公開日2013-06-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The linear ubiquitin-specific deubiquitinase gumby regulates angiogenesis.
Nature, 498, 2013
4IS1
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BU of 4is1 by Molmil
Crystal structure of ZNF217 bound to DNA
分子名称: 5'-D(*AP*AP*TP*GP*CP*AP*GP*AP*AP*TP*CP*GP*AP*TP*TP*CP*TP*GP*CP*A)-3', 5'-D(*TP*TP*TP*GP*CP*AP*GP*AP*AP*TP*CP*GP*AP*TP*TP*CP*TP*GP*CP*A)-3', CHLORIDE ION, ...
著者Vandevenne, M.S, Jacques, D.A, Guss, J.M, Mackay, J.P.
登録日2013-01-16
公開日2013-02-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献New insights into DNA recognition by zinc fingers revealed by structural analysis of the oncoprotein ZNF217.
J.Biol.Chem., 288, 2013
4IWW
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BU of 4iww by Molmil
Computational Design of an Unnatural Amino Acid Metalloprotein with Atomic Level Accuracy
分子名称: COBALT (II) ION, SULFATE ION, Unnatural Amino Acid Mediated Metalloprotein
著者Mills, J, Bolduc, J, Khare, S, Stoddard, B, Baker, D.
登録日2013-01-24
公開日2013-08-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Computational design of an unnatural amino Acid dependent metalloprotein with atomic level accuracy.
J.Am.Chem.Soc., 135, 2013
3NH9
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BU of 3nh9 by Molmil
Nucleotide Binding Domain of Human ABCB6 (ATP bound structure)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ATP-binding cassette sub-family B member 6, mitochondrial, ...
著者Haffke, M, Menzel, A, Carius, Y, Jahn, D, Heinz, D.W.
登録日2010-06-14
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structures of the nucleotide-binding domain of the human ABCB6 transporter and its complexes with nucleotides.
Acta Crystallogr.,Sect.D, 66, 2010
3MEB
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BU of 3meb by Molmil
Structure of cytoplasmic aspartate aminotransferase from giardia lamblia
分子名称: 1,2-ETHANEDIOL, Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2010-03-31
公開日2010-04-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures of aspartate aminotransferases from Trypanosoma brucei, Leishmania major and Giardia lamblia.
Acta Crystallogr F Struct Biol Commun, 71, 2015
3VM5
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BU of 3vm5 by Molmil
Recombinant medaka fish alpha-amylase expressed in yeast Pichia pastoris
分子名称: CALCIUM ION, CHLORIDE ION, alpha-amylase
著者Mizutani, K, Toyoda, M, Mikami, B.
登録日2011-12-08
公開日2012-06-06
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural and functional characterization of recombinant medaka fish alpha-amylase expressed in yeast Pichia pastoris.
Biochim.Biophys.Acta, 1824, 2012
4FAL
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BU of 4fal by Molmil
Crystal structure of human 17beta-hydroxysteroid dehydrogenase type 5 in complex with 3-((3,4-dihydroisoquinolin-2(1H)-yl)sulfonyl)-N-methylbenzamide (80)
分子名称: 1,2-ETHANEDIOL, 3-(3,4-dihydroisoquinolin-2(1H)-ylsulfonyl)-N-methylbenzamide, Aldo-keto reductase family 1 member C3, ...
著者Turnbull, A.P, Jamieson, S.M.F, Brooke, D.G, Heinrich, D, Atwell, G.J, Silva, S, Hamilton, E.J, Rigoreau, L.J.M, Trivier, E, Soudy, C, Samlal, S.S, Owen, P.J, Schroeder, E, Raynham, T, Flanagan, J.U, Denny, W.A.
登録日2012-05-22
公開日2012-10-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献3-(3,4-Dihydroisoquinolin-2(1H)-ylsulfonyl)benzoic acids; a New Class of Highly Potent and Selective Inhibitors of the Type 5 17-beta-hydroxysteroid Dehydrogenase AKR1C3
J.Med.Chem., 55, 2012
4IZJ
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BU of 4izj by Molmil
Crystal structure of yellowtail ascites virus VP4 protease with a wild-type active site reveals acyl-enzyme complexes and product complexes.
分子名称: BETA-MERCAPTOETHANOL, GLYCEROL, MAGNESIUM ION, ...
著者Paetzel, M, Chung, I.Y.W.
登録日2013-01-30
公開日2013-02-27
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structures of Yellowtail Ascites Virus VP4 Protease: TRAPPING AN INTERNAL CLEAVAGE SITE TRANS ACYL-ENZYME COMPLEX IN A NATIVE SER/LYS DYAD ACTIVE SITE.
J.Biol.Chem., 288, 2013
3NHB
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BU of 3nhb by Molmil
Nucleotide Binding Domain of Human ABCB6 (ADP bound structure)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-binding cassette sub-family B member 6, mitochondrial, ...
著者Haffke, M, Menzel, A, Carius, Y, Jahn, D, Heinz, D.W.
登録日2010-06-14
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structures of the nucleotide-binding domain of the human ABCB6 transporter and its complexes with nucleotides.
Acta Crystallogr.,Sect.D, 66, 2010
4F2J
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BU of 4f2j by Molmil
Crystal structure of ZNF217 bound to DNA, P6522 crystal form
分子名称: 5'-D(*TP*TP*TP*GP*CP*AP*GP*AP*AP*TP*CP*GP*AP*TP*TP*CP*TP*GP*CP*A)-3', ZINC ION, Zinc finger protein 217
著者Vandevenne, M.S, Jacques, D.A, Guss, J.M, Mackay, J.P.
登録日2012-05-08
公開日2013-02-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献New insights into DNA recognition by zinc fingers revealed by structural analysis of the oncoprotein ZNF217
J.Biol.Chem., 288, 2013
4GYN
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BU of 4gyn by Molmil
The E142L mutant of the amidase from Geobacillus pallidus
分子名称: Aliphatic amidase, CHLORIDE ION
著者Weber, B.W, Sewell, B.T, Kimani, S.W, Varsani, A, Cowan, D.A, Hunter, R.
登録日2012-09-05
公開日2013-08-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The mechanism of the amidases: mutating the glutamate adjacent to the catalytic triad inactivates the enzyme due to substrate mispositioning.
J.Biol.Chem., 288, 2013
5TBE
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BU of 5tbe by Molmil
Human p38alpha MAP Kinase in Complex with Dibenzosuberone Compound 2
分子名称: Mitogen-activated protein kinase 14, ~{N}-[2,4-bis(fluoranyl)-5-[[9-(2-morpholin-4-ylethylcarbamoyl)-11-oxidanylidene-5,6-dihydrodibenzo[1,2-~{d}:1',2'-~{f}][7]annulen-3-yl]amino]phenyl]thiophene-2-carboxamide
著者Buehrmann, M, Rauh, D.
登録日2016-09-12
公開日2017-04-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Optimized Target Residence Time: Type I1/2 Inhibitors for p38 alpha MAP Kinase with Improved Binding Kinetics through Direct Interaction with the R-Spine.
Angew. Chem. Int. Ed. Engl., 56, 2017
4KYD
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BU of 4kyd by Molmil
Partial Structure of the C-terminal domain of the HPIV4B phosphoprotein, fused to MBP.
分子名称: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Maltose-binding periplasmic protein, Phosphoprotein, ...
著者Yegambaram, K, Bulloch, E.M.M, Kingston, R.L.
登録日2013-05-28
公開日2013-09-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Protein domain definition should allow for conditional disorder.
Protein Sci., 22, 2013
3NH7
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BU of 3nh7 by Molmil
Crystal structure of the neutralizing Fab fragment AbD1556 bound to the BMP type I receptor IA
分子名称: Antibody fragment Fab AbD1556, heavy chain, light chain, ...
著者Mueller, T.D, Harth, S, Sebald, W.
登録日2010-06-14
公開日2010-10-27
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A selection fit mechanism in BMP receptor IA as a possible source for BMP ligand-receptor promiscuity
Plos One, 5, 2010
4GYL
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BU of 4gyl by Molmil
The E142L mutant of the amidase from Geobacillus pallidus showing the result of Michael addition of acrylamide at the active site cysteine
分子名称: Aliphatic amidase, CHLORIDE ION, PROPIONAMIDE
著者Weber, B.W, Sewell, B.T, Kimani, S.W, Varsani, A, Cowan, D.A, Hunter, R.
登録日2012-09-05
公開日2013-08-21
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The mechanism of the amidases: mutating the glutamate adjacent to the catalytic triad inactivates the enzyme due to substrate mispositioning.
J.Biol.Chem., 288, 2013
3O2L
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BU of 3o2l by Molmil
Crystal Structure of an Inactive Kemp Elimination Design HG-1
分子名称: Endo-1,4-beta-xylanase
著者Thomas, L.M, Privett, H.K, Mayo, S.L.
登録日2010-07-22
公開日2011-07-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Iterative approach to computational enzyme design.
Proc.Natl.Acad.Sci.USA, 109, 2012
4KYX
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BU of 4kyx by Molmil
Crystal structure of ADP-ribose pyrophosphatase MutT from Rickettsia felis
分子名称: ADP-ribose pyrophosphatase MutT
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2013-05-29
公開日2013-08-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of ADP-ribose pyrophosphatase MutT from Rickettsia felis
To be Published
4I8Y
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BU of 4i8y by Molmil
Structure of the unliganded N254Y/H258Y mutant of the phosphatidylinositol-specific phospholipase C from S. aureus
分子名称: 1-phosphatidylinositol phosphodiesterase, ACETATE ION, CHLORIDE ION
著者Goldstein, R.I, Cheng, J, Stec, B, Gershenson, A, Roberts, M.F.
登録日2012-12-04
公開日2013-04-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The cation-pi box is a specific phosphatidylcholine membrane targeting motif.
J.Biol.Chem., 288, 2013
4I40
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BU of 4i40 by Molmil
crystal structure of Staphylococcal inositol monophosphatase-1: 50mM LiCl inhibited complex
分子名称: GLYCEROL, Inositol monophosphatase family protein, MAGNESIUM ION, ...
著者Dutta, A, Bhattacharyya, S, Dutta, D, Das, A.K.
登録日2012-11-27
公開日2013-11-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural elucidation of the binding site and mode of inhibition of Li(+) and Mg(2+) in inositol monophosphatase.
Febs J., 281, 2014
4I90
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BU of 4i90 by Molmil
Structure of the N254Y/H258Y mutant of the phosphatidylinositol-specific phospholipase C from S. aureus bound to choline
分子名称: 1-phosphatidylinositol phosphodiesterase, ACETATE ION, CHLORIDE ION, ...
著者Goldstein, R.I, Cheng, J, Stec, B, Gershenson, A, Roberts, M.F.
登録日2012-12-04
公開日2013-04-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The cation-pi box is a specific phosphatidylcholine membrane targeting motif.
J.Biol.Chem., 288, 2013
3GRR
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BU of 3grr by Molmil
Crystal Structure of the complex between S-Adenosyl Homocysteine and Methanocaldococcus jannaschi Dim1.
分子名称: Dimethyladenosine transferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Scarsdale, J.N, Musayev, F.N, Rife, J.P.
登録日2009-03-26
公開日2010-03-31
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Binding of adenosine-based ligands to the MjDim1 rRNA methyltransferase: implications for reaction mechanism and drug design.
Biochemistry, 49, 2010
3GRV
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BU of 3grv by Molmil
Crystal Structure of the Complex between Adenosine and Methanocaldococcus jannaschi Dim1
分子名称: ADENOSINE, Dimethyladenosine transferase, SULFATE ION
著者Scarsdale, J.N, Musayev, F.N, Rife, J.P.
登録日2009-03-26
公開日2010-03-31
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Binding of adenosine-based ligands to the MjDim1 rRNA methyltransferase: implications for reaction mechanism and drug design.
Biochemistry, 49, 2010

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