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2RQT
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Solution structure of the human DDEF1 SH3 domain
分子名称: Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1
著者Kaieda, S, Matsui, C, Mimori-Kiyosue, Y, Ikegami, T.
登録日2009-12-14
公開日2010-07-07
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structural basis of the recognition of the SAMP motif of adenomatous polyposis coli by the Src-homology 3 domain.
Biochemistry, 49, 2010
2RLF
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Proton Channel M2 from Influenza A in complex with inhibitor rimantadine
分子名称: Matrix protein 2, RIMANTADINE
著者Chou, J.J, Schnell, J.R.
登録日2007-07-11
公開日2008-01-29
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure and mechanism of the M2 proton channel of influenza A virus.
Nature, 451, 2008
2RQU
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Solution structure of the complex between the DDEF1 SH3 domain and the APC SAMP1 motif
分子名称: 19-mer from Adenomatous polyposis coli protein, DDEF1_SH3
著者Kaieda, S, Matsui, C, Mimori-Kiyosue, Y, Ikegami, T.
登録日2009-12-14
公開日2010-07-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis of the recognition of the SAMP motif of adenomatous polyposis coli by the Src-homology 3 domain.
Biochemistry, 49, 2010
2RQL
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Solution structure of the E. coli ribosome hibernation promoting factor HPF
分子名称: Probable sigma-54 modulation protein
著者Sato, A, Mishima, M.
登録日2009-08-13
公開日2010-02-02
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the E. coli ribosome hibernation promoting factor HPF: Implications for the relationship between structure and function.
Biochem.Biophys.Res.Commun., 389, 2009
2RPC
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Solution structure of the tandem zf-C2H2 domains from the human zinc finger protein ZIC 3
分子名称: ZINC ION, Zinc finger protein ZIC 3
著者Tomizawa, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-05-14
公開日2009-03-31
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Functional and structural basis of the nuclear localization signal in the ZIC3 zinc finger domain
Hum.Mol.Genet., 17, 2008
2RSM
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Solution structure and siRNA-mediated knockdown analysis of the mitochondrial disease-related protein C12orf65 (ICT2)
分子名称: Probable peptide chain release factor C12orf65 homolog, mitochondrial
著者Enomoto, M, Tochio, N, Tomizawa, T, Koshiba, S, Guntert, P, Kigawa, T, Yokoyama, S, Nameki, N.
登録日2012-03-28
公開日2012-08-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure and siRNA-mediated knockdown analysis of the mitochondrial disease-related protein C12orf65.
Proteins, 2012
2RRF
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The solution structure of the C-terminal region of Zinc finger FYVE domain-containing protein 21
分子名称: Zinc finger FYVE domain-containing protein 21
著者Koshiba, S, Tomizawa, T, Hayashi, F, Tochio, N, Harada, T, Watanabe, S, Kigawa, T, Yokoyama, S.
登録日2010-08-03
公開日2011-08-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献ZF21 protein, a regulator of the disassembly of focal adhesions and cancer metastasis, contains a novel noncanonical pleckstrin homology domain
J.Biol.Chem., 286, 2011
6YH2
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tRNA-guanine Transglycosylase (TGT) labeled with 5-fluorotryptophan in co-crystallized complex with 2-(methylamino)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
分子名称: 2-(methylamino)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one, CHLORIDE ION, GLYCEROL, ...
著者Nguyen, A, Heine, A, Klebe, G.
登録日2020-03-28
公開日2020-04-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Co-crystallization, nanoESI-MS and 19F NMR reveal dimer disturbing inhibitors and conformational changes at dimer contacts
To Be Published
6YIQ
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tRNA-Guanine Transglycosylase (TGT) in co-crystallized complex (P2) with 6-amino-2-(methylamino)-4-phenethyl-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
分子名称: 6-amino-2-(methylamino)-4-phenethyl-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one, GLYCEROL, Queuine tRNA-ribosyltransferase, ...
著者Nguyen, A, Heine, A, Klebe, G.
登録日2020-04-01
公開日2020-04-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Co-crystallization, 19F NMR and nanoESI-MS reveal dimer disturbing inhibitors and conformational changes at dimer contacts
To Be Published
6YGX
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tRNA-guanine Transglycosylase (TGT) labeled with 5-fluorotryptophan in co-crystallized complex with 6-amino-2-(methylamino)-4-(2-((2R,3R,4S,5R,6S)-3,4,5,6-tetramethoxytetrahydro-2H-pyran-2-yl)ethyl)-1H-imidazo[4,5-g]quinazolin-8(7H)-one
分子名称: 6-azanyl-2-(methylamino)-4-[2-[(2~{R},3~{R},4~{S},5~{R},6~{S})-3,4,5,6-tetramethoxyoxan-2-yl]ethyl]-1,7-dihydroimidazo[4,5-g]quinazolin-8-one, Queuine tRNA-ribosyltransferase, ZINC ION
著者Nguyen, A, Heine, A, Klebe, G.
登録日2020-03-27
公開日2020-04-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Co-crystallization, nanoESI-MS and 19F NMR reveal dimer disturbing inhibitors and conformational changes at dimer contacts
To Be Published
6YH3
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tRNA-Guanine Transglycosylase (TGT) in co-crystallized complex with 6-amino-2-(methylamino)-4-phenethyl-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
分子名称: 6-amino-2-(methylamino)-4-phenethyl-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one, Queuine tRNA-ribosyltransferase, ZINC ION
著者Nguyen, A, Heine, A, Klebe, G.
登録日2020-03-28
公開日2020-04-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Co-crystallization, 19F NMR and nanoESI-MS reveal dimer disturbing inhibitors and conformational changes at dimer contacts
To Be Published
6YGS
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BU of 6ygs by Molmil
tRNA-guanine Transglycosylase (TGT) in co-crystallized complex with 6-amino-2-(methylamino)-4-(4-(trifluoromethyl)phenethyl)-3,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
分子名称: 6-amino-2-(methylamino)-4-(4-(trifluoromethyl)phenethyl)-3,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one, GLYCEROL, Queuine tRNA-ribosyltransferase, ...
著者Nguyen, A, Heine, A, Klebe, G.
登録日2020-03-27
公開日2020-04-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Co-crystallization and 19F NMR reveal dimer disturbing inhibitors and conformational changes at dimer contacts
To Be Published
1PU1
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BU of 1pu1 by Molmil
Solution structure of the Hypothetical protein mth677 from Methanothermobacter Thermautotrophicus
分子名称: Hypothetical protein MTH677
著者Blanco, F.J, Yee, A, Campos-Olivas, R, Devos, D, Valencia, A, Arrowsmith, C.H, Rico, M.
登録日2003-06-23
公開日2004-06-08
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the hypothetical protein Mth677 from Methanobacterium thermoautotrophicum: A novel {alpha}+{beta} fold
Protein Sci., 13, 2004
6XWI
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BU of 6xwi by Molmil
Solution NMR structure of the S0_2.126 designed protein
分子名称: S0_2.126
著者Abriata, L.A.
登録日2020-01-23
公開日2020-04-15
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献De novo protein design enables the precise induction of RSV-neutralizing antibodies.
Science, 368, 2020
1KSB
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BU of 1ksb by Molmil
Relationship of Solution and Protein-Bound Structures of DNA Duplexes with the Major Intrastrand Cross-Link Lesions Formed on Cisplatin Binding to DNA
分子名称: 5'-D(*AP*GP*GP*CP*CP*GP*GP*AP*G)-3', 5'-D(*CP*TP*CP*CP*GP*GP*CP*CP*T)-3', Cisplatin
著者Marzilli, L.G, Saad, J.S, Kuklenyik, Z, Keating, K.A, Xu, Y.
登録日2002-01-11
公開日2002-01-17
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Relationship of solution and protein-bound structures of DNA duplexes with the major intrastrand cross-link lesions formed on cisplatin binding to DNA.
J.Am.Chem.Soc., 123, 2001
5KMZ
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BU of 5kmz by Molmil
Solution NMR structure of Tetrahymena telomerase RNA pseudoknot
分子名称: Telomerase RNA pseudoknot
著者Cash, D.D, Feigon, J.
登録日2016-06-27
公開日2016-10-12
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of Tetrahymena telomerase reveals previously unknown subunits, functions, and interactions.
Science, 350, 2015
1MX7
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BU of 1mx7 by Molmil
Two homologous rat cellular retinol-binding proteins differ in local structure and flexibility
分子名称: CELLULAR RETINOL-BINDING PROTEIN I, APO
著者Lu, J, Cistola, D.P, Li, E.
登録日2002-10-01
公開日2003-07-29
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Two Homologous Rat Cellular Retinol-binding Proteins Differ in Local Conformational Flexibility.
J.Mol.Biol., 330, 2003
1N4B
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BU of 1n4b by Molmil
Solution Structure of the undecamer CGAAAC*TTTCG
分子名称: 5'-D(*CP*GP*AP*AP*AP*CP*TP*TP*TP*CP*G)-3', 5'-D(*CP*GP*AP*AP*AP*D00*TP*TP*TP*CP*G)-3'
著者Webba da Silva, M, Noronha, A.M, Noll, D.M, Miller, P.S, Colvin, O.M, Gamcsik, M.P.
登録日2002-10-30
公開日2003-11-04
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution Structure of a DNA Duplex Containing Mispair-Aligned N4C-Ethyl-N4C Interstrand Cross-Linked Cytosines
Biochemistry, 41, 2002
1N0D
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Stability of cyclic beta-hairpins: Asymmetric contibutions from side chains of hydrogen bonded cross-strand residue pair
分子名称: bhp_VWLH, disulfide cyclized beta-hairpin peptide
著者Russell, S.J, Blandl, T, Skelton, N.J, Cochran, A.G.
登録日2002-10-11
公開日2003-02-04
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Stability of Cyclic Beta-Hairpins: Asymmetric Contributions From Side Chains of Hydrogen Bonded Cross-Strand Residue Pair
J.Am.Chem.Soc., 125, 2003
1NA2
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BU of 1na2 by Molmil
Solution structure of the p2b hairpin from human telomerase RNA
分子名称: telomerase RNA p2b hairpin
著者Theimer, C.A, Finger, L.D, Trantirek, L, Feigon, J.
登録日2002-11-26
公開日2003-01-21
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Mutations linked to dyskeratosis congenita cause changes in the structural equilibrium in telomerase RNA
Proc.Natl.Acad.Sci.USA, 100, 2003
1N8C
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Solution Structure of a Cis-Opened (10R)-N6-Deoxyadenosine Adduct of (9S,10R)-(9,10)-Epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene in a DNA Duplex
分子名称: (9S,10R)-9-HYDROXY-7,8,9,10-TETRAHYDROBENZO[A]PYRENE, 5'-D(*CP*CP*TP*CP*GP*TP*GP*AP*CP*CP*G)-3', 5'-D(*CP*GP*GP*TP*CP*AP*CP*GP*AP*GP*G)-3'
著者Volk, D.E, Thiviyanathan, V, Rice, J.S, Luxon, B.A, Shah, J.H, Yagi, H, Sayer, J.M, Yeh, H.J.C, Jerina, D.M, Gorenstein, D.G.
登録日2002-11-20
公開日2003-02-14
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure of a Cis-Opened (10R)-N6-Deoxyadenosine Adduct of (9S,10R)-(9,10)-Epoxy-7,8,9,10-tetrahydrobenzo[a]pyrene in a DNA Duplex
Biochemistry, 42, 2003
1P8G
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The solution structure of apo CopZ from Bacillus subtilis
分子名称: similar to mercuric transport protein
著者Banci, L, Bertini, I, Del Conte, R.
登録日2003-05-07
公開日2003-11-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure of Apo CopZ from Bacillus subtilis: Further Analysis of the Changes Associated with the Presence of Copper
Biochemistry, 42, 2003
1P7A
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Solution Structure of the Third Zinc Finger from BKLF
分子名称: Kruppel-like factor 3, ZINC ION
著者Simpson, R.J.Y, Cram, E.D, Czolij, R, Matthews, J.M, Crossley, M, Mackay, J.P.
登録日2003-04-30
公開日2003-12-30
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献CCHX zinc finger derivatives retain the ability to bind Zn(II) and mediate protein-DNA interactions.
J.Biol.Chem., 278, 2003
1OQP
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STRUCTURE OF THE CA2+/C-TERMINAL DOMAIN OF CALTRACTIN IN COMPLEX WITH THE CDC31P-BINDING DOMAIN FROM KAR1P
分子名称: Caltractin, Cell division control protein KAR1
著者Hu, H.T, Chazin, W.J.
登録日2003-03-10
公開日2003-06-24
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Unique Features in the C-terminal Domain Provide Caltractin with Target Specificity
J.Mol.Biol., 330, 2003
5M1L
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Structure of DNA AGCGA-quadruplex adopted by 15-mer d(GCGAGGGAGCGAGGG), VK34, oligonucleotide found in regulatory region of the PLEKHG3 human gene
分子名称: DNA (5'-D(*GP*CP*GP*AP*GP*GP*GP*AP*GP*CP*GP*AP*GP*GP*G)-3')
著者Kocman, V, Plavec, J.
登録日2016-10-09
公開日2017-05-31
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Tetrahelical structural family adopted by AGCGA-rich regulatory DNA regions.
Nat Commun, 8, 2017

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