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4IX0
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Computational Design of an Unnatural Amino Acid Metalloprotein with Atomic Level Accuracy
分子名称: NICKEL (II) ION, SULFATE ION, Unnatural Amino Acid Mediated Metalloprotein
著者Mills, J, Bolduc, J, Khare, S, Stoddard, B, Baker, D.
登録日2013-01-24
公開日2013-08-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Computational design of an unnatural amino Acid dependent metalloprotein with atomic level accuracy.
J.Am.Chem.Soc., 135, 2013
4WX2
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BU of 4wx2 by Molmil
Crystal structure of Tryptophan Synthase from Salmonella typhimurium in complex with two F6F molecules in the alpha-site and one F6F molecule in the beta-site
分子名称: 1,2-ETHANEDIOL, 2-{[4-(TRIFLUOROMETHOXY)BENZOYL]AMINO}ETHYL DIHYDROGEN PHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
著者Hilario, E, Caulkins, B.G, Young, R.P, Niks, D, Dunn, M.F, Mueller, L.J, Fan, L.
登録日2014-11-13
公開日2015-11-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Visualizing the tunnel in tryptophan synthase with crystallography: Insights into a selective filter for accommodating indole and rejecting water.
Biochim.Biophys.Acta, 1864, 2016
4X4A
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BU of 4x4a by Molmil
Crystal structure of the intramolecular trans-sialidase from Ruminococcus gnavus in complex with 2,7-Anhydro-Neu5Ac
分子名称: 2-ACETYLAMINO-7-(1,2-DIHYDROXY-ETHYL)-3-HYDROXY-6,8-DIOXA-BICYCLO[3.2.1]OCTANE-5-CARBOXYLIC ACID, ACETYL GROUP, Anhydrosialidase, ...
著者Owen, C.D, Tailford, L.E, Taylor, G.L, Juge, N.
登録日2014-12-02
公開日2015-07-22
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Discovery of intramolecular trans-sialidases in human gut microbiota suggests novel mechanisms of mucosal adaptation.
Nat Commun, 6, 2015
3M9Y
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BU of 3m9y by Molmil
Crystal structure of Triosephosphate isomerase from methicillin resistant Staphylococcus aureus at 1.9 Angstrom resolution
分子名称: CITRIC ACID, SODIUM ION, Triosephosphate isomerase
著者Mukherjee, S, Dutta, D, Saha, B, Das, A.K.
登録日2010-03-23
公開日2011-04-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of triosephosphate isomerase from methicillin resistant Staphylococcus aureus MRSA252 provide structural insights into novel modes of ligand binding and unique conformations of catalytic loop
Biochimie, 94, 2012
4YW5
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BU of 4yw5 by Molmil
Crystal Structure of Streptococcus pneumoniae NanC, complex with oseltamivir carboxylate
分子名称: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, 1,2-ETHANEDIOL, GLYCEROL, ...
著者Owen, C.D, Lukacik, P, Potter, J.A, Walsh, M, Taylor, G.L.
登録日2015-03-20
公開日2015-09-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Streptococcus pneumoniae NanC: STRUCTURAL INSIGHTS INTO THE SPECIFICITY AND MECHANISM OF A SIALIDASE THAT PRODUCES A SIALIDASE INHIBITOR.
J.Biol.Chem., 290, 2015
3LF6
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BU of 3lf6 by Molmil
Crystal structure of HIV epitope-scaffold 4E10_1XIZA_S0_001_N
分子名称: PHOSPHATE ION, Putative phosphotransferase system
著者Holmes, M.A.
登録日2010-01-15
公開日2010-09-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Computational Design of Epitope-Scaffolds Allows Induction of Antibodies Specific for a Poorly Immunogenic HIV Vaccine Epitope.
Structure, 18, 2010
3LFO
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BU of 3lfo by Molmil
Crystal structure of T. celer L30e E90A/R92A variant
分子名称: 50S ribosomal protein L30e
著者Chan, C.H, Wong, K.B.
登録日2010-01-18
公開日2010-04-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Stabilizing salt-bridge enhances protein thermostability by reducing the heat capacity change of unfolding.
Plos One, 6, 2011
4X6K
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Crystal structure of the intramolecular trans-sialidase from Ruminococcus gnavus in complex with Siastatin B
分子名称: (2S,3R,4S,5S)-2-(acetylamino)-5-carboxy-3,4-dihydroxypiperidinium, ACETYL GROUP, Anhydrosialidase
著者Owen, C.D, Tailford, L.E, Taylor, G.L, Juge, N.
登録日2014-12-08
公開日2015-07-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Discovery of intramolecular trans-sialidases in human gut microbiota suggests novel mechanisms of mucosal adaptation.
Nat Commun, 6, 2015
4FA3
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BU of 4fa3 by Molmil
Crystal structure of human 17beta-hydroxysteroid dehydrogenase type 5 in complex with (R)-1-(naphthalen-2-ylsulfonyl)piperidine-3-carboxylic acid (86)
分子名称: (3R)-1-(naphthalen-2-ylsulfonyl)piperidine-3-carboxylic acid, 1,2-ETHANEDIOL, ACETATE ION, ...
著者Turnbull, A.P, Jamieson, S.M.F, Brooke, D.G, Heinrich, D, Atwell, G.J, Silva, S, Hamilton, E.J, Rigoreau, L.J.M, Trivier, E, Soudy, C, Samlal, S.S, Owen, P.J, Schroeder, E, Raynham, T, Flanagan, J.U, Denny, W.A.
登録日2012-05-21
公開日2012-10-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献3-(3,4-Dihydroisoquinolin-2(1H)-ylsulfonyl)benzoic acids; a New Class of Highly Potent and Selective Inhibitors of the Type 5 17-beta-hydroxysteroid Dehydrogenase AKR1C3
J.Med.Chem., 55, 2012
4WRB
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Macrophage Migration Inhibitory Factor in complex with a biaryltriazole inhibitor (3b-190)
分子名称: 4-{4-[6-(2-methoxyethoxy)quinolin-2-yl]-1H-1,2,3-triazol-1-yl}phenol, GLYCEROL, ISOPROPYL ALCOHOL, ...
著者Robertson, M.J, Baxter, R.H.G, Jorgensen, W.L.
登録日2014-10-23
公開日2015-03-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Design, synthesis, and protein crystallography of biaryltriazoles as potent tautomerase inhibitors of macrophage migration inhibitory factor.
J.Am.Chem.Soc., 137, 2015
4WQQ
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BU of 4wqq by Molmil
Structure of EPNH mutant of CEL-I
分子名称: CALCIUM ION, Lectin CEL-I, N-acetyl-D-galactosamine-specific C-type, ...
著者Unno, H, Hatakeyama, T.
登録日2014-10-22
公開日2015-04-29
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mannose-recognition mutant of the galactose/N-acetylgalactosamine-specific C-type lectin CEL-I engineered by site-directed mutagenesis.
Biochim.Biophys.Acta, 1850, 2015
3MOS
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BU of 3mos by Molmil
The structure of human Transketolase
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, SODIUM ION, ...
著者Parthier, C, Tittmann, K.
登録日2010-04-23
公開日2010-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The crystal structure of human transketolase and new insights into its mode of action.
J.Biol.Chem., 285, 2010
4YJG
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BU of 4yjg by Molmil
Crystal structure of DAAO(Y228L/R283G) variant (R-3-amino 1-phenylbutane binding form)
分子名称: (2R)-4-phenylbutan-2-amine, D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Nakano, S, Yasukawa, K, Kawahara, N, Ishitsubo, E, Tokiwa, H, Asano, Y.
登録日2015-03-03
公開日2016-04-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of DAAO variant
To Be Published
4YIP
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BU of 4yip by Molmil
X-ray structure of the iron/manganese cambialistic superoxide dismutase from Streptococcus mutans
分子名称: FE (III) ION, Superoxide dismutase [Mn/Fe]
著者Russo Krauss, I, Merlino, A, Pica, A, Sica, F.
登録日2015-03-02
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Fine tuning of metal-specific activity in the Mn-like group of cambialistic superoxide dismutases
Rsc Adv, 5, 2015
4YNQ
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BU of 4ynq by Molmil
TREX1-dsDNA complex
分子名称: DNA (24-MER), DNA (5'-D(P*GP*TP*GP*CP*TP*GP*AP*CP*GP*TP*CP*AP*GP*CP*AP*CP*GP*AP*CP*G)-3'), MAGNESIUM ION, ...
著者Fye, J.M, Harvey, S, Perrino, F.W, Hollis, T.
登録日2015-03-10
公開日2015-05-27
最終更新日2025-02-12
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Exonuclease TREX1 degrades double-stranded DNA to prevent spontaneous lupus-like inflammatory disease.
Proc.Natl.Acad.Sci.USA, 112, 2015
3KRE
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BU of 3kre by Molmil
Crystal structure of phosphoribosylaminoimidazole-succinocarboxamide synthase from Ehrlichia chaffeensis at 1.8A resolution
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Phosphoribosylaminoimidazole-succinocarboxamide synthase
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2009-11-18
公開日2009-12-01
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of phosphoribosylaminoimidazole-succinocarboxamide synthase from Ehrlichia chaffeensis at 1.8A resolution
To be Published
3KSZ
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BU of 3ksz by Molmil
Crystal Structure of C151S+H178N mutant of Glyceraldehyde-3-phosphate-dehydrogenase 1 (GAPDH 1) from Staphylococcus aureus MRSA252 complexed with NAD and G3P
分子名称: 3-PHOSPHOGLYCERIC ACID, Glyceraldehyde-3-phosphate dehydrogenase 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Mukherjee, S, Dutta, D, Saha, B, Das, A.K.
登録日2009-11-24
公開日2010-08-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of glyceraldehyde-3-phosphate dehydrogenase 1 from methicillin-resistant Staphylococcus aureus MRSA252 provides novel insights into substrate binding and catalytic mechanism.
J.Mol.Biol., 401, 2010
4EG4
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BU of 4eg4 by Molmil
Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor Chem 1289
分子名称: 2-({3-[(3,5-dibromo-2-ethoxybenzyl)amino]propyl}amino)quinolin-4(1H)-one, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Koh, C.Y, Kim, J.E, Shibata, S, Fan, E, Verlinde, C.L.M.J, Hol, W.G.J.
登録日2012-03-30
公開日2012-09-12
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (3.151 Å)
主引用文献Distinct States of Methionyl-tRNA Synthetase Indicate Inhibitor Binding by Conformational Selection.
Structure, 20, 2012
4YPG
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BU of 4ypg by Molmil
Structural Insights Into the Neutralization Properties of a Human Anti-Interferon Monoclonal Antibody
分子名称: Interferon alpha-2, NICKEL (II) ION, Sifalimumab heavy chain, ...
著者Oganesyan, V, Dall'Acqua, W.F.
登録日2015-03-12
公開日2015-05-06
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural Insights into the Neutralization Properties of the Fully Human, Anti-interferon Monoclonal Antibody Sifalimumab.
J.Biol.Chem., 290, 2015
4X47
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BU of 4x47 by Molmil
Crystal structure of the intramolecular trans-sialidase from Ruminococcus gnavus in complex with Neu5Ac2en
分子名称: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, Anhydrosialidase, PHOSPHATE ION
著者Owen, C.D, Tailford, L.E, Taylor, G.L, Juge, N.
登録日2014-12-02
公開日2015-07-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of intramolecular trans-sialidases in human gut microbiota suggests novel mechanisms of mucosal adaptation.
Nat Commun, 6, 2015
4YEI
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BU of 4yei by Molmil
Beta1mut synthetic solenoid protein
分子名称: beta1mut
著者Murray, J.W, Kraatz, S.
登録日2015-02-24
公開日2016-03-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.55 Å)
主引用文献Synthetic beta-solenoid proteins with the fragment-free computational design of a beta-hairpin extension.
Proc.Natl.Acad.Sci.USA, 113, 2016
4KSI
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BU of 4ksi by Molmil
Crystal Structure Analysis of the Acidic Leucine Aminopeptidase of Tomato
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, GLYCEROL, ...
著者DuPrez, K.T, Scranton, M, Walling, L, Fan, L.
登録日2013-05-17
公開日2013-06-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of tomato wound-induced leucine aminopeptidase sheds light on substrate specificity.
Acta Crystallogr.,Sect.D, 70, 2014
4YW1
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BU of 4yw1 by Molmil
Crystal Structure of Streptococcus pneumoniae NanC, complex with Neu5Ac and Neu5Ac2en following soaking with 3'SL
分子名称: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Owen, C.D, Lukacik, P, Potter, J.A, Walsh, M, Taylor, G.L.
登録日2015-03-20
公開日2015-09-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Streptococcus pneumoniae NanC: STRUCTURAL INSIGHTS INTO THE SPECIFICITY AND MECHANISM OF A SIALIDASE THAT PRODUCES A SIALIDASE INHIBITOR.
J.Biol.Chem., 290, 2015
4YW3
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BU of 4yw3 by Molmil
Crystal Structure of Streptococcus pneumoniae NanC, complex with Neu5Ac and Neu5Ac2en following soaking with Neu5Ac2en
分子名称: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, GLYCEROL, N-acetyl-alpha-neuraminic acid, ...
著者Owen, C.D, Lukacik, P, Potter, J.A, Walsh, M, Taylor, G.L.
登録日2015-03-20
公開日2015-09-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Streptococcus pneumoniae NanC: STRUCTURAL INSIGHTS INTO THE SPECIFICITY AND MECHANISM OF A SIALIDASE THAT PRODUCES A SIALIDASE INHIBITOR.
J.Biol.Chem., 290, 2015
4K6R
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BU of 4k6r by Molmil
Crystal structure of GlmU in complex with ATP
分子名称: 2-acetamido-2-deoxy-1-O-phosphono-alpha-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional protein GlmU, ...
著者Vithani, N, Prakash, B.
登録日2013-04-16
公開日2014-04-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献GlmU (N-acetylglucosamine-1-phosphate uridyltransferase) bound to three magnesium ions and ATP at the active site.
Acta Crystallogr.,Sect.F, 70, 2014

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件を2025-07-09に公開中

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