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1NJD
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THYMIDYLATE SYNTHASE, MUTATION, N229D WITH 2'-DEOXYURIDINE 5'-MONOPHOSPHATE (DUMP)
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE
著者Finer-Moore, J, Stroud, R.M.
登録日1996-01-23
公開日1996-07-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Partitioning roles of side chains in affinity, orientation, and catalysis with structures for mutant complexes: asparagine-229 in thymidylate synthase.
Biochemistry, 35, 1996
2BIJ
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BU of 2bij by Molmil
Crystal structure of the human protein tyrosine phosphatase PTPN5 (STEP, striatum enriched enriched Phosphatase)
分子名称: SULFATE ION, TYROSINE-PROTEIN PHOSPHATASE, NON-RECEPTOR TYPE 5
著者Barr, A.J, Debreczeni, J.E, Eswaran, J, Smee, C, Burgess, N, Gileadi, O, Sundstrom, M, Arrowsmith, C, Edwards, A, Knapp, S, von Delft, F.
登録日2005-01-21
公開日2005-03-17
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structures and inhibitor identification for PTPN5, PTPRR and PTPN7: a family of human MAPK-specific protein tyrosine phosphatases.
Biochem. J., 395, 2006
1NMC
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COMPLEX BETWEEN NC10 ANTI-INFLUENZA VIRUS NEURAMINIDASE SINGLE CHAIN ANTIBODY WITH A 15 RESIDUE LINKER AND INFLUENZA VIRUS NEURAMINIDASE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, NEURAMINIDASE, ...
著者Malby, R.L, Mccoy, A.J, Kortt, A.A, Hudson, P.J, Colman, P.M.
登録日1997-12-21
公開日1998-09-23
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Three-dimensional structures of single-chain Fv-neuraminidase complexes.
J.Mol.Biol., 279, 1998
2BFB
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Reactivity modulation of human branched-chain alpha-ketoacid dehydrogenase by an internal molecular switch
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT, 2-OXOISOVALERATE DEHYDROGENASE BETA SUBUNIT, ...
著者Machius, M, Wynn, R.M, Chuang, J.L, Tomchick, D.R, Brautigam, C.A, Chuang, D.T.
登録日2004-12-06
公開日2006-02-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献A Versatile Conformational Switch Regulates Reactivity in Human Branched-Chain Alpha-Ketoacid Dehydrogenase.
Structure, 14, 2006
2BFF
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Reactivity modulation of human branched-chain alpha-ketoacid dehydrogenase by an internal molecular switch
分子名称: 2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT, 2-OXOISOVALERATE DEHYDROGENASE BETA SUBUNIT, 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, ...
著者Machius, M, Wynn, R.M, Chuang, J.L, Tomchick, D.R, Brautigam, C.A, Chuang, D.T.
登録日2004-12-06
公開日2006-02-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献A Versatile Conformational Switch Regulates Reactivity in Human Branched-Chain Alpha-Ketoacid Dehydrogenase.
Structure, 14, 2006
1O7O
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Roles of Individual Residues of Alpha-1,3 Galactosyltransferases in Substrate Binding and Catalysis
分子名称: MANGANESE (II) ION, N-ACETYLLACTOSAMINIDE ALPHA-1,3-GALACTOSYLTRANSFERASE, URIDINE-5'-DIPHOSPHATE, ...
著者Zhang, Y, Swaminathan, G.J, Deshpande, A, Natesh, R, Xie, Z, Acharya, K.R, Brew, K.
登録日2002-11-11
公開日2003-11-06
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Roles of individual enzyme-substrate interactions by alpha-1,3-galactosyltransferase in catalysis and specificity.
Biochemistry, 42, 2003
8AUZ
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Crystal structure of GSK3 beta (GSK3b) in complex with FL291.
分子名称: 8-morpholin-4-yl-2-pyridin-3-yl-[1,3]oxazolo[5,4-f]quinoxaline, Glycogen synthase kinase-3 beta, SULFATE ION
著者Chaikuad, A, Mongin, F, Knapp, S, Structural Genomics Consortium (SGC)
登録日2022-08-26
公開日2023-04-19
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Oxazolo[5,4-f]quinoxaline-type selective inhibitors of glycogen synthase kinase-3 alpha (GSK-3 alpha ): Development and impact on temozolomide treatment of glioblastoma cells.
Bioorg.Chem., 134, 2023
2BOV
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Molecular recognition of an ADP-ribosylating Clostridium botulinum C3 exoenzyme by RalA GTPase
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, MONO-ADP-RIBOSYLTRANSFERASE C3, ...
著者Holbourn, K.P, Sutton, J.M, Evans, H.R, Shone, C.C, Acharya, K.R.
登録日2005-04-14
公開日2005-04-15
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Molecular Recognition of an Adp-Ribosylating Clostridium Botulinum C3 Exoenzyme by Rala Gtpase
Proc.Natl.Acad.Sci.USA, 102, 2005
8AV1
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Crystal structure of GSK3 beta (GSK3b) in complex with CD7.
分子名称: 1,2-ETHANEDIOL, 2-pyridin-3-yl-8-thiomorpholin-4-yl-[1,3]oxazolo[5,4-f]quinoxaline, Glycogen synthase kinase-3 beta, ...
著者Chaikuad, A, Mongin, F, Knapp, S, Structural Genomics Consortium (SGC)
登録日2022-08-26
公開日2023-04-19
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Oxazolo[5,4-f]quinoxaline-type selective inhibitors of glycogen synthase kinase-3 alpha (GSK-3 alpha ): Development and impact on temozolomide treatment of glioblastoma cells.
Bioorg.Chem., 134, 2023
7ZTH
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Cryo-EM structure of holo-PdxR from Bacillus clausii bound to its target DNA in the open conformation
分子名称: DNA (48-MER), PLP-dependent aminotransferase family protein
著者Freda, I, Montemiglio, L.C, Tramonti, A, Contestabile, R, Vallone, B, Exertier, C, Savino, C, Chaves Sanjuan, A, Bolognesi, M.
登録日2022-05-10
公開日2023-07-05
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural insights into the DNA recognition mechanism by the bacterial transcription factor PdxR.
Nucleic Acids Res., 51, 2023
7ZLA
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Cryo-EM structure of holo-PdxR from Bacillus clausii bound to its target DNA in the half-closed conformation
分子名称: DNA (48-MER), PLP-dependent aminotransferase family protein
著者Freda, I, Montemiglio, L.C, Tramonti, A, Contestabile, R, Vallone, B, Savino, C, Exertier, C, Bolognesi, M, Chaves Sanjuan, A.
登録日2022-04-14
公開日2023-07-05
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (3.99 Å)
主引用文献Structural insights into the DNA recognition mechanism by the bacterial transcription factor PdxR.
Nucleic Acids Res., 51, 2023
7ZN5
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Cryo-EM structure of holo-PdxR from Bacillus clausii bound to its target DNA in the closed conformation, C2 symmetry.
分子名称: DNA (48-MER), PLP-dependent aminotransferase family protein
著者Freda, I, Montemiglio, L.C, Tramonti, A, Contestabile, R, Vallone, B, Exertier, C, Savino, C, Chaves Sanjuan, A, Bolognesi, M.
登録日2022-04-20
公開日2023-07-05
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural insights into the DNA recognition mechanism by the bacterial transcription factor PdxR.
Nucleic Acids Res., 51, 2023
7ZPA
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Cryo-EM structure of holo-PdxR from Bacillus clausii bound to its target DNA in the closed conformation, C1 symmetry
分子名称: DNA (48-MER), PLP-dependent aminotransferase family protein
著者Freda, I, Montemiglio, L.C, Tramonti, A, Contestabile, R, Vallone, B, Exertier, C, Savino, C, Chaves Sanjuan, A, Bolognesi, M.
登録日2022-04-27
公開日2023-07-05
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural insights into the DNA recognition mechanism by the bacterial transcription factor PdxR.
Nucleic Acids Res., 51, 2023
8DYC
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Human CYP3A4 bound to a substrate
分子名称: 2-butyl-6-(butylamino)-1H-benzo[de]isoquinoline-1,3(2H)-dione, Cytochrome P450 3A4, GLYCEROL, ...
著者Sevrioukova, I.F.
登録日2022-08-04
公開日2022-10-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of CYP3A4 Complexed with Fluorol Identifies the Substrate Access Channel as a High-Affinity Ligand Binding Site.
Int J Mol Sci, 23, 2022
8E0H
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BU of 8e0h by Molmil
Crystal structure of human Sar1aD104/D140A double mutant
分子名称: GTP-binding protein SAR1a, GUANOSINE-5',3'-TETRAPHOSPHATE
著者Huang, Q.
登録日2022-08-09
公開日2022-11-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The alarmone ppGpp selectively inhibits the isoform A of the human small GTPase Sar1.
Proteins, 91, 2023
8DDG
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FYF peptide forms a standard beta-sheet
分子名称: PHE-TYR-PHE
著者Sawaya, M.R, Hazari, A, Eisenberg, D.E, Vlahakis, N.W.
登録日2022-06-18
公開日2022-09-28
最終更新日2024-05-22
実験手法ELECTRON CRYSTALLOGRAPHY (0.9 Å)
主引用文献The rippled beta-sheet layer configuration-a novel supramolecular architecture based on predictions by Pauling and Corey.
Chem Sci, 13, 2022
8DDH
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Racemic mixture of FYF peptide reveals rippled beta-sheet
分子名称: PHE-TYR-PHE
著者Sawaya, M.R, Hazari, A, Eisenberg, D.E.
登録日2022-06-18
公開日2022-09-28
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献The rippled beta-sheet layer configuration-a novel supramolecular architecture based on predictions by Pauling and Corey.
Chem Sci, 13, 2022
8DDF
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Quasi-racemic mixture of L-FWF and D-FYF peptide reveals rippled beta-sheet
分子名称: 1,1,1,3,3,3-hexafluoropropan-2-ol, DPN-DTY-DPN, PHE-TRP-PHE
著者Sawaya, M.R, Hazari, A, Eisenberg, D.E.
登録日2022-06-18
公開日2022-09-28
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献The rippled beta-sheet layer configuration-a novel supramolecular architecture based on predictions by Pauling and Corey.
Chem Sci, 13, 2022
8EEM
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C. ammoniagenes monoamine oxidase (MAO) bound to norepinephrine
分子名称: Amine oxidase, FLAVIN-ADENINE DINUCLEOTIDE, Noradrenaline
著者Muellers, S.N, Allen, K.N.
登録日2022-09-07
公開日2023-02-01
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structural Insights into the Substrate Range of a Bacterial Monoamine Oxidase.
Biochemistry, 62, 2023
5D8B
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Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatch
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Svidritskiy, E, Korostelev, A.A.
登録日2015-08-17
公開日2015-10-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.63 Å)
主引用文献Ribosome Structure Reveals Preservation of Active Sites in the Presence of a P-Site Wobble Mismatch.
Structure, 23, 2015
8EEK
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C. ammoniagenes monoamine oxidase (MAO) bound to tyramine
分子名称: 4-(2-aminoethyl)phenol, Amine oxidase, FLAVIN-ADENINE DINUCLEOTIDE
著者Muellers, S.N, Allen, K.N.
登録日2022-09-07
公開日2023-02-01
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Structural Insights into the Substrate Range of a Bacterial Monoamine Oxidase.
Biochemistry, 62, 2023
8ERM
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Crystal structure of FliC D2/D3 domains from Pseudomonas aeruginosa PAO1
分子名称: B-type flagellin, GLYCEROL, SULFATE ION
著者Nedeljkovic, M, Bonsor, D.A, Postel, S, Sundberg, E.J.
登録日2022-10-12
公開日2023-05-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.475 Å)
主引用文献An unbroken network of interactions connecting flagellin domains is required for motility in viscous environments.
Plos Pathog., 19, 2023
8FOW
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Ternary complex of CDK2 with small molecule ligands TW8672 and Dinaciclib
分子名称: 1,2-ETHANEDIOL, 2-{[2-(1H-indol-3-yl)ethyl]amino}-5-nitrobenzoic acid, 3-[({3-ethyl-5-[(2S)-2-(2-hydroxyethyl)piperidin-1-yl]pyrazolo[1,5-a]pyrimidin-7-yl}amino)methyl]-1-hydroxypyridinium, ...
著者Schonbrunn, E, Sun, L.
登録日2023-01-03
公開日2023-05-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Development of allosteric and selective CDK2 inhibitors for contraception with negative cooperativity to cyclin binding.
Nat Commun, 14, 2023
8ZBQ
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Local map of Omicron Subvariant JN.1 RBD with ACE2
分子名称: Angiotensin-converting enzyme 2, Spike protein S2'
著者Yan, R.H, Yang, H.N.
登録日2024-04-27
公開日2024-09-18
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献Structural basis for the evolution and antibody evasion of SARS-CoV-2 BA.2.86 and JN.1 subvariants.
Nat Commun, 15, 2024
4UHM
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Characterization of a Novel Transaminase from Pseudomonas sp. Strain AAC
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, ETHANOL, ...
著者Wilding, M, Peat, T.S, Newman, J, Scott, C.
登録日2015-03-25
公開日2016-04-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献A Beta-Alanine Catabolism Pathway Containing a Highly Promiscuous Omega-Transaminase in the 12-Aminododecanate-Degrading Pseudomonas Sp. Strain Aac.
Appl.Environ.Microbiol., 82, 2016

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