Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3THT
DownloadVisualize
BU of 3tht by Molmil
Crystal structure and RNA binding properties of the RRM/AlkB domains in human ABH8, an enzyme catalyzing tRNA hypermodification, Northeast Structural Genomics Consortium Target HR5601B
分子名称: 2-OXOGLUTARIC ACID, Alkylated DNA repair protein alkB homolog 8, MANGANESE (II) ION, ...
著者Pastore, C, Topalidou, I, Forouhar, F, Yan, A.C, Levy, M, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2011-08-19
公開日2011-11-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Crystal structure and RNA binding properties of the RNA recognition motif (RRM) and AlkB domains in human AlkB homolog 8 (ABH8), an enzyme catalyzing tRNA hypermodification.
J.Biol.Chem., 287, 2012
3THP
DownloadVisualize
BU of 3thp by Molmil
Crystal structure and RNA binding properties of the RRM/AlkB domains in human ABH8, an enzyme catalyzing tRNA hypermodification, Northeast Structural Genomics Consortium Target HR5601B
分子名称: 2-OXOGLUTARIC ACID, Alkylated DNA repair protein alkB homolog 8, MANGANESE (II) ION, ...
著者Pastore, C, Topalidou, I, Forouhar, F, Yan, A.C, Levy, M, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2011-08-19
公開日2011-11-02
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure and RNA binding properties of the RNA recognition motif (RRM) and AlkB domains in human AlkB homolog 8 (ABH8), an enzyme catalyzing tRNA hypermodification.
J.Biol.Chem., 287, 2012
2XS5
DownloadVisualize
BU of 2xs5 by Molmil
Crystal structure of the RRM domain of mouse Deleted in azoospermia- like in complex with Mvh RNA, UGUUC
分子名称: 5'-R(*UP*GP*UP*UP*CP)-3', DELETED IN AZOOSPERMIA-LIKE, DI(HYDROXYETHYL)ETHER
著者Jenkins, H.T, Edwards, T.A.
登録日2010-09-24
公開日2011-10-05
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Kinked Beta-Strands Mediate High-Affinity Recognition of Mrna Targets by the Germ-Cell Regulator Dazl
Proc.Natl.Acad.Sci.USA, 108, 2011
2XS7
DownloadVisualize
BU of 2xs7 by Molmil
Crystal structure of the RRM domain of mouse Deleted in azoospermia- like in complex with Sycp3 RNA, UUGUUU
分子名称: 5'-R(*UP*UP*GP*UP*UP*UP)-3', DELETED IN AZOOSPERMIA-LIKE, ZINC ION
著者Jenkins, H.T, Edwards, T.A.
登録日2010-09-24
公開日2011-10-05
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Kinked Beta-Strands Mediate High-Affinity Recognition of Mrna Targets by the Germ-Cell Regulator Dazl
Proc.Natl.Acad.Sci.USA, 108, 2011
2XSF
DownloadVisualize
BU of 2xsf by Molmil
Crystal structure of the RRM domain of mouse Deleted in azoospermia- like
分子名称: DELETED IN AZOOSPERMIA-LIKE, GLYCEROL, SULFATE ION
著者Jenkins, H.T, Edwards, T.A.
登録日2010-09-28
公開日2011-10-05
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Kinked Beta-Strands Mediate High-Affinity Recognition of Mrna Targets by the Germ-Cell Regulator Dazl
Proc.Natl.Acad.Sci.USA, 108, 2011
2XS2
DownloadVisualize
BU of 2xs2 by Molmil
Crystal structure of the RRM domain of mouse Deleted in azoospermia-like in complex with RNA, UUGUUCUU
分子名称: 5'-R(*UP*UP*GP*UP*UP*CP*UP*U)-3', DELETED IN AZOOSPERMIA-LIKE, ZINC ION
著者Jenkins, H.T, Edwards, T.A.
登録日2010-09-24
公開日2011-10-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Kinked beta-strands mediate high-affinity recognition of mRNA targets by the germ-cell regulator DAZL.
Proc. Natl. Acad. Sci. U.S.A., 108, 2011
2LA4
DownloadVisualize
BU of 2la4 by Molmil
NMR structure of the C-terminal RRM domain of poly(U) binding 1
分子名称: Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1
著者Santiveri, C.M, Mirassou, Y, Rico-Lastres, P, Martinez-Lumbreras, S, Perez-Canadillas, J.M.
登録日2011-03-01
公開日2011-09-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Pub1p C-terminal RRM domain interacts with Tif4631p through a conserved region neighbouring the Pab1p binding site
Plos One, 6, 2011
3R27
DownloadVisualize
BU of 3r27 by Molmil
Crystal structure of the first RRM domain of heterogeneous nuclear ribonucleoprotein L (HnRNP L)
分子名称: GLYCEROL, Heterogeneous nuclear ribonucleoprotein L
著者Zhang, W, Liu, Y, Zeng, F, Niu, L, Teng, M, Li, X.
登録日2011-03-14
公開日2011-09-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Crystal structure of the first RRM domain of heterogeneous nuclear ribonucleoprotein L (HnRNP L)
To be Published
3R1L
DownloadVisualize
BU of 3r1l by Molmil
Crystal structure of the Class I ligase ribozyme-substrate preligation complex, C47U mutant, Mg2+ bound
分子名称: 5'-R(*UP*CP*CP*AP*GP*UP*A)-3', Class I ligase ribozyme, MAGNESIUM ION, ...
著者Shechner, D.M, Bartel, D.P.
登録日2011-03-10
公開日2011-08-31
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.125 Å)
主引用文献The structural basis of RNA-catalyzed RNA polymerization.
Nat.Struct.Mol.Biol., 18, 2011
3R1H
DownloadVisualize
BU of 3r1h by Molmil
Crystal structure of the Class I ligase ribozyme-substrate preligation complex, C47U mutant, Ca2+ bound
分子名称: 5'-R(*UP*CP*CP*AP*GP*UP*A)-3', CALCIUM ION, Class I ligase ribozyme, ...
著者Shechner, D.M, Bartel, D.P.
登録日2011-03-10
公開日2011-08-31
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献The structural basis of RNA-catalyzed RNA polymerization.
Nat.Struct.Mol.Biol., 18, 2011
3S7R
DownloadVisualize
BU of 3s7r by Molmil
Crystal structure of a Heterogeneous nuclear ribonucleoprotein A/B (HNRPAB) from HOMO SAPIENS at 2.15 A resolution
分子名称: Heterogeneous nuclear ribonucleoprotein A/B, UNKNOWN LIGAND
著者Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL), Partnership for Stem Cell Biology (STEMCELL)
登録日2011-05-26
公開日2011-08-10
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of a Heterogeneous nuclear ribonucleoprotein A/B (HNRPAB) from Homo sapiens at 2.15 A resolution
To be published
3SMZ
DownloadVisualize
BU of 3smz by Molmil
Human raver1 RRM1-3 domains (residues 39-320)
分子名称: Ribonucleoprotein PTB-binding 1, SULFATE ION
著者Rangarajan, E.S, Lee, J.H, Izard, T.
登録日2011-06-28
公開日2011-08-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Apo raver1 structure reveals distinct RRM domain orientations.
Protein Sci., 20, 2011
2YH1
DownloadVisualize
BU of 2yh1 by Molmil
Model of human U2AF65 tandem RRM1 and RRM2 domains with eight-site uridine binding
分子名称: 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP)-3', SPLICING FACTOR U2AF 65 KDA SUBUNIT
著者Mackereth, C.D, Madl, T, Simon, B, Zanier, K, Gasch, A, Sattler, M.
登録日2011-04-26
公開日2011-07-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Multi-Domain Conformational Selection Underlies Pre-Mrna Splicing Regulation by U2Af
Nature, 475, 2011
2YH0
DownloadVisualize
BU of 2yh0 by Molmil
Solution structure of the closed conformation of human U2AF65 tandem RRM1 and RRM2 domains
分子名称: SPLICING FACTOR U2AF 65 KDA SUBUNIT
著者Mackereth, C.D, Madl, T, Simon, B, Zanier, K, Gasch, A, Sattler, M.
登録日2011-04-26
公開日2011-07-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Multi-Domain Conformational Selection Underlies Pre-Mrna Splicing Regulation by U2Af
Nature, 475, 2011
3S8S
DownloadVisualize
BU of 3s8s by Molmil
Crystal structure of the RRM domain of human SETD1A
分子名称: Histone-lysine N-methyltransferase SETD1A, UNKNOWN ATOM OR ION
著者Chao, X, Tempel, W, Bian, C, Cerovina, T, Walker, J.R, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2011-05-30
公開日2011-06-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of the RRM domain of human SETD1A
to be published
2LA6
DownloadVisualize
BU of 2la6 by Molmil
Solution NMR Structure of RRM domain of RNA-binding protein FUS from homo sapiens, Northeast Structural Genomics Consortium Target HR6430A
分子名称: RNA-binding protein FUS
著者Liu, G, Xiao, R, Janjua, H, Ciccosanti, C, Wang, H, Lee, H, Acton, T.B, Everett, J.K, Huang, Y.J, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2011-03-04
公開日2011-05-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Northeast Structural Genomics Consortium Target HR6430A
To be Published
2RRA
DownloadVisualize
BU of 2rra by Molmil
Solution structure of RNA binding domain in human Tra2 beta protein in complex with RNA (GAAGAA)
分子名称: 5'-R(*GP*AP*AP*GP*AP*A)-3', cDNA FLJ40872 fis, clone TUTER2000283, ...
著者Tsuda, K, Kuwasako, K, Takahashi, M, Someya, T, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Sugano, S, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2010-06-17
公開日2011-04-27
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for the dual RNA-recognition modes of human Tra2-beta RRM.
Nucleic Acids Res., 39, 2011
2RRB
DownloadVisualize
BU of 2rrb by Molmil
Refinement of RNA binding domain in human Tra2 beta protein
分子名称: cDNA FLJ40872 fis, clone TUTER2000283, highly similar to Homo sapiens transformer-2-beta (SFRS10) gene
著者Tsuda, K, Kuwasako, K, Takahashi, M, Someya, T, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Sugano, S, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2010-06-17
公開日2011-04-27
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for the dual RNA-recognition modes of human Tra2-beta RRM.
Nucleic Acids Res., 39, 2011
3P49
DownloadVisualize
BU of 3p49 by Molmil
Crystal Structure of a Glycine Riboswitch from Fusobacterium nucleatum
分子名称: GLYCINE, GLYCINE RIBOSWITCH, MAGNESIUM ION, ...
著者Butler, E.B, Wang, J, Xiong, Y, Strobel, S.
登録日2010-10-06
公開日2011-04-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.55 Å)
主引用文献Structural basis of cooperative ligand binding by the glycine riboswitch.
Chem.Biol., 18, 2011
2KXN
DownloadVisualize
BU of 2kxn by Molmil
NMR structure of human Tra2beta1 RRM in complex with AAGAAC RNA
分子名称: 5'-R(*AP*AP*GP*AP*AP*C)-3', Transformer-2 protein homolog beta
著者Clery, A, Jayne, S, Benderska, N, Dominguez, C, Stamm, S, Allain, F.H.-T.
登録日2010-05-10
公開日2011-03-16
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Molecular basis of purine-rich RNA recognition by the human SR-like protein Tra2-beta1
Nat.Struct.Mol.Biol., 18, 2011
3Q2T
DownloadVisualize
BU of 3q2t by Molmil
Crystal Structure of CFIm68 RRM/CFIm25/RNA complex
分子名称: Cleavage and polyadenylation specificity factor subunit 5, Cleavage and polyadenylation specificity factor subunit 6, RNA
著者Yang, Q, Coseno, M, Gilmartin, G.M, Doublie, S.
登録日2010-12-20
公開日2011-02-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.061 Å)
主引用文献Crystal Structure of a Human Cleavage Factor CFI(m)25/CFI(m)68/RNA Complex Provides an Insight into Poly(A) Site Recognition and RNA Looping.
Structure, 19, 2011
3Q2S
DownloadVisualize
BU of 3q2s by Molmil
Crystal Structure of CFIm68 RRM/CFIm25 complex
分子名称: Cleavage and polyadenylation specificity factor subunit 5, Cleavage and polyadenylation specificity factor subunit 6
著者Yang, Q, Coseno, M, Gilmartin, G.M, Doublie, S.
登録日2010-12-20
公開日2011-02-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal Structure of a Human Cleavage Factor CFI(m)25/CFI(m)68/RNA Complex Provides an Insight into Poly(A) Site Recognition and RNA Looping.
Structure, 19, 2011
3LQV
DownloadVisualize
BU of 3lqv by Molmil
Branch Recognition by SF3b14
分子名称: ADENINE, Pre-mRNA branch site protein p14, Splicing factor 3B subunit 1
著者Schellenberg, M.J, MacMillan, A.M.
登録日2010-02-10
公開日2011-01-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Branch Recognition by SF3b14
Rna, 17, 2011
2KT5
DownloadVisualize
BU of 2kt5 by Molmil
RRM domain of mRNA export adaptor REF2-I bound to HSV-1 ICP27 peptide
分子名称: ICP27, RNA and export factor-binding protein 2
著者Tunnicliffe, N.B, Golovanov, A.P, Wilson, S.A, Hautbergue, G.M.
登録日2010-01-18
公開日2011-01-12
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural Basis for the Recognition of Cellular mRNA Export Factor REF by Herpes Viral Proteins HSV-1 ICP27 and HVS ORF57.
Plos Pathog., 7, 2011
3PGW
DownloadVisualize
BU of 3pgw by Molmil
Crystal structure of human U1 snRNP
分子名称: DNA 5'-D(*AP*GP*GP*TP*AP*AP*GP*TP*A)-3', Sm B, Sm G, ...
著者Weber, G, Trowitzsch, S, Kastner, B, Luehrmann, R, Wahl, M.C.
登録日2010-11-02
公開日2010-12-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (4.4 Å)
主引用文献Functional organization of the Sm core in the crystal structure of human U1 snRNP.
Embo J., 29, 2010

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon