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4FXH
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BU of 4fxh by Molmil
Crystal structure of the isolated E. coli RelE toxin, P212121 form
分子名称: SULFATE ION, mRNA interferase RelE
著者Brodersen, D.E, Boggild, A, Sofos, N.
登録日2012-07-03
公開日2012-08-29
最終更新日2024-11-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The crystal structure of the intact E. coli RelBE toxin-antitoxin complex provides the structural basis for conditional cooperativity.
Structure, 20, 2012
2OS0
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BU of 2os0 by Molmil
Structures of actinonin bound peptide deformylases from E. faecalis and S. pyogenes
分子名称: NICKEL (II) ION, Peptide deformylase, SULFATE ION
著者Kim, E.E, Kim, K.-H, Moon, J.H, Choi, K, Lee, H.K, Park, H.S.
登録日2007-02-05
公開日2008-03-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structures of actinonin bound peptide deformylases from E. faecalis and S. pyogenes
To be Published
1NNX
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BU of 1nnx by Molmil
Structure of the hypothetical protein ygiW from E. coli.
分子名称: Protein ygiW, SULFATE ION
著者Lehmann, C, Galkin, A, Pullalarevu, S, Sarikaya, E, Krajewski, W, Lim, K, Howard, A, Herzberg, O, Structure 2 Function Project (S2F)
登録日2003-01-14
公開日2004-03-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure of the hypothetical protein ygiW from E. coli.
To be Published
2R69
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BU of 2r69 by Molmil
Crystal structure of Fab 1A1D-2 complexed with E-DIII of Dengue virus at 3.8 angstrom resolution
分子名称: Heavy chain of 1A1D-2, Light chain of 1A1D-2, Major envelope protein E
著者Lok, S.M, Kostyuchenko, V.K, Nybakken, G.E, Holdaway, H.A, Battisti, A.J, Sukupolvi-petty, S, Sedlak, D, Fremont, D.H, Chipman, P.R, Roehrig, J.T, Diamond, M.S, Kuhn, R.J, Rossmann, M.G.
登録日2007-09-05
公開日2007-12-25
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Binding of a neutralizing antibody to dengue virus alters the arrangement of surface glycoproteins.
Nat.Struct.Mol.Biol., 15, 2008
3ZD9
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BU of 3zd9 by Molmil
Potassium bound structure of E. coli ExoIX in P21
分子名称: POTASSIUM ION, PROTEIN XNI
著者Anstey-Gilbert, C.S, Hemsworth, G.R, Flemming, C.S, Hodskinson, M.R.G, Zhang, J, Sedelnikova, S.E, Stillman, T.J, Sayers, J.R, Artymiuk, P.J.
登録日2012-11-26
公開日2013-07-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Structure of E. Coli Exoix - Implications for DNA Binding and Catalysis in Flap Endonucleases
Nucleic Acids Res., 41, 2013
1JYS
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BU of 1jys by Molmil
Crystal Structure of E. coli MTA/AdoHcy Nucleosidase
分子名称: ADENINE, MTA/SAH nucleosidase
著者Lee, J.E, Cornell, K.A, Riscoe, M.K, Howell, P.L.
登録日2001-09-13
公開日2002-10-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of E. coli 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase reveals similarity to the purine nucleoside phosphorylases.
Structure, 9, 2001
7Z6U
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BU of 7z6u by Molmil
Pim1 in complex with (E)-4-((6-amino-2-oxoindolin-3-ylidene)methyl)benzoic acid and Pimtide
分子名称: 4-[(~{E})-(6-azanyl-2-oxidanylidene-1~{H}-indol-3-ylidene)methyl]benzoic acid, GLYCEROL, Isoform 1 of Serine/threonine-protein kinase pim-1, ...
著者Hochban, P.M.M, Heine, A, Diederich, W.E.
登録日2022-03-14
公開日2023-02-01
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Pose, duplicate, then elaborate: Steps towards increased affinity for inhibitors targeting the specificity surface of the Pim-1 kinase.
Eur.J.Med.Chem., 245, 2023
4KPE
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BU of 4kpe by Molmil
Novel fluoroquinolones in complex with topoisomerase IV from S. pneumoniae and E-site G-gate
分子名称: (7aR,8R)-8-amino-4-cyclopropyl-12-fluoro-1-oxo-4,7,7a,8,9,10-hexahydro-1H-pyrrolo[1',2':1,7]azepino[2,3-h]quinoline-2-carboxylic acid, DNA topoisomerase 4 subunit A, DNA topoisomerase 4 subunit B, ...
著者Laponogov, I, Pan, X.-S, Vesekov, D.A, Cirz, R.T, Wagman, A.S, Moser, H.E, Fisher, L.M, Sanderson, M.R.
登録日2013-05-13
公開日2014-11-26
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.43 Å)
主引用文献Exploring the active site of the Streptococcus pneumoniae topoisomerase IV-DNA cleavage complex with novel 7,8-bridged fluoroquinolones.
Open Biol, 6, 2016
4KPF
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BU of 4kpf by Molmil
Novel fluoroquinolones in complex with topoisomerase IV from S. pneumoniae and E-site G-gate
分子名称: (3aS,4R)-4-amino-13-cyclopropyl-8-fluoro-10-oxo-3a,4,5,6,10,13-hexahydro-1H,3H-pyrrolo[2',1':3,4][1,4]oxazepino[5,6-h]quinoline-11-carboxylic acid, E-site1, E-site2, ...
著者Laponogov, I, Pan, X.-S, Vesekov, D.A, Cirz, R.T, Wagman, A.S, Moser, H.E, Fisher, L.M, Sanderson, M.R.
登録日2013-05-13
公開日2014-11-26
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献Exploring the active site of the Streptococcus pneumoniae topoisomerase IV-DNA cleavage complex with novel 7,8-bridged fluoroquinolones.
Open Biol, 6, 2016
4FXI
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BU of 4fxi by Molmil
Crystal structure of the isolated E. coli RelE toxin, P21 form
分子名称: SULFATE ION, mRNA interferase RelE
著者Brodersen, D.E, Boggild, A, Sofos, N.
登録日2012-07-03
公開日2012-08-29
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.8003 Å)
主引用文献The crystal structure of the intact E. coli RelBE toxin-antitoxin complex provides the structural basis for conditional cooperativity.
Structure, 20, 2012
1EYF
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BU of 1eyf by Molmil
REFINED STRUCTURE OF THE DNA METHYL PHOSPHOTRIESTER REPAIR DOMAIN OF E. COLI ADA
分子名称: ADA REGULATORY PROTEIN, ZINC ION
著者Lin, Y, Dotsch, V, Wintner, T, Peariso, K, Myers, L.C, Penner-Hahn, J.E, Verdine, G.L, Wagner, G.
登録日2000-05-06
公開日2003-09-09
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural basis for the functional switch of the E. coli Ada protein
Biochemistry, 40, 2001
4GQO
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BU of 4gqo by Molmil
2.1 Angstrom resolution crystal structure of uncharacterized protein lmo0859 from Listeria monocytogenes EGD-e
分子名称: Lmo0859 protein, TRIETHYLENE GLYCOL
著者Halavaty, A.S, Filippova, E.V, Minasov, G, Dubrovska, I, Winsor, J, Shuvalova, L, Peterson, S.N, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2012-08-23
公開日2012-09-19
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献2.1 Angstrom resolution crystal structure of uncharacterized protein lmo0859 from Listeria monocytogenes EGD-e
To be Published
3ZDA
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BU of 3zda by Molmil
Structure of E. coli ExoIX in complex with a fragment of the Flap1 DNA oligonucleotide, potassium and magnesium
分子名称: 5'-D(*AP*AP*GP*CP*GP*CP)-3', 5'-D(*GP*CP*GP*CP)-3', MAGNESIUM ION, ...
著者Hemsworth, G.R, Anstey-Gilbert, C.S, Flemming, C.S, Hodskinson, M.R.G, Zhang, J, Sedelnikova, S.E, Stillman, T.J, Sayers, J.R, Artymiuk, P.J.
登録日2012-11-26
公開日2013-07-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The Structure of E. Coli Exoix - Implications for DNA Binding and Catalysis in Flap Endonucleases
Nucleic Acids Res., 41, 2013
4HKH
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BU of 4hkh by Molmil
Structure of the Hcp1 protein from E. coli EAEC 042 pathovar, mutants N93W-S158W
分子名称: Putative type VI secretion protein, SULFATE ION
著者Douzi, B, Spinelli, S, Derrez, E, Blangy, S, Brunet, Y.R, Cascales, E, Cambillau, C.
登録日2012-10-15
公開日2013-12-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Structure of the Hcp1 protein from E. coli EAEC 042 pathovar, mutants N93W-S158W
To be Published
2OVR
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BU of 2ovr by Molmil
Structure of the Skp1-Fbw7-CyclinEdegN complex
分子名称: F-box/WD repeat protein 7, S-phase kinase-associated protein 1A, SULFATE ION, ...
著者Hao, B, Oehlmann, S, Sowa, M.E, Harper, J.W, Pavletich, N.P.
登録日2007-02-14
公開日2007-04-24
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of a Fbw7-Skp1-Cyclin E Complex: Multisite-Phosphorylated Substrate Recognition by SCF Ubiquitin Ligases
Mol.Cell, 26, 2007
1KFT
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BU of 1kft by Molmil
Solution Structure of the C-Terminal domain of UvrC from E-coli
分子名称: Excinuclease ABC subunit C
著者Singh, S, Folkers, G.E, Bonvin, A.M.J.J, Boelens, R, Wechselberger, R, Niztayev, A, Kaptein, R.
登録日2001-11-23
公開日2002-11-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure and DNA-binding properties of the C-terminal domain of UvrC from E.coli
EMBO J., 21, 2002
4E1T
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BU of 4e1t by Molmil
X-ray crystal structure of the transmembrane beta-domain from invasin from Yersinia pseudotuberculosis
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Invasin
著者Fairman, J.W, Dautin, N, Wojtowicz, D, Wei, L, Noinaj, N, Barnard, T.J, Udho, E, Finkelstein, A, Przytycka, T.M, Cherezov, V, Buchanan, S.K.
登録日2012-03-07
公開日2012-06-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.263 Å)
主引用文献Crystal Structures of the Outer Membrane Domain of Intimin and Invasin from Enterohemorrhagic E. coli and Enteropathogenic Y. pseudotuberculosis.
Structure, 20, 2012
4E1S
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BU of 4e1s by Molmil
X-ray crystal structure of the transmembrane beta-domain from intimin from EHEC strain O157:H7
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHLORIDE ION, ...
著者Fairman, J.W, Dautin, N, Wojtowicz, D, Wei, L, Noinaj, N, Barnard, T.J, Udho, E, Finkelstein, A, Przytycka, T.M, Cherezov, V, Buchanan, S.K.
登録日2012-03-07
公開日2012-06-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.855 Å)
主引用文献Crystal Structures of the Outer Membrane Domain of Intimin and Invasin from Enterohemorrhagic E. coli and Enteropathogenic Y. pseudotuberculosis.
Structure, 20, 2012
3QIB
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BU of 3qib by Molmil
Crystal structure of the 2B4 TCR in complex with MCC/I-Ek
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2B4 beta chain, DI(HYDROXYETHYL)ETHER, ...
著者Ely, L.K, Newell, E.W, Davis, M.M, Garcia, K.C.
登録日2011-01-26
公開日2011-04-27
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of specificity and cross-reactivity in T cell receptors specific for cytochrome c-I-E(k).
J.Immunol., 186, 2011
4JXF
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BU of 4jxf by Molmil
Crystal Structure of PLK4 Kinase with an inhibitor: 400631 ((1R,2S)-2-{3-[(E)-2-{4-[(DIMETHYLAMINO)METHYL]PHENYL}ETHENYL]-2H-INDAZOL-6-YL}-5'-METHOXYSPIRO[CYCLOPROPANE-1,3'-INDOL]-2'(1'H)-ONE)
分子名称: (1R,2S)-2-{3-[(E)-2-{4-[(dimethylamino)methyl]phenyl}ethenyl]-2H-indazol-6-yl}-5'-methoxyspiro[cyclopropane-1,3'-indol]-2'(1'H)-one, 1,2-ETHANEDIOL, Serine/threonine-protein kinase PLK4
著者Qiu, W, Plotnikova, O, Feher, M, Awrey, D.E, Chirgadze, N.Y.
登録日2013-03-28
公開日2014-04-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of PLK4 Kinase with an inhibitor: 400631
To be Published
4JYI
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BU of 4jyi by Molmil
Crystal structure of RARbeta LBD in complex with selective partial agonist BMS641 [3-chloro-4-[(E)-2-(5,5-dimethyl-8-phenyl-5,6-dihydronaphthalen-2-yl)ethenyl]benzoic acid]
分子名称: 3-chloro-4-[(E)-2-(5,5-dimethyl-8-phenyl-5,6-dihydronaphthalen-2-yl)ethenyl]benzoic acid, CITRATE ANION, Nuclear receptor coactivator 1, ...
著者Nadendla, E.K, Teyssier, C, Germain, P, Delfosse, V, Bourguet, W.
登録日2013-03-29
公開日2014-03-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献An Unexpected Mode Of Binding Defines BMS948 as A Full Retinoic Acid Receptor beta (RAR beta , NR1B2) Selective Agonist.
Plos One, 10, 2015
1WRA
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BU of 1wra by Molmil
Crystal Structure of Phosphorylcholine Esterase Domain of the Virulence Factor Choline Binding Protein E from Streptococcus Pneumoniae
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, FE (III) ION, ...
著者Garau, G, Dideberg, O.
登録日2004-10-13
公開日2005-05-31
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of phosphorylcholine esterase domain of the virulence factor choline-binding protein e from streptococcus pneumoniae: new structural features among the metallo-beta-lactamase superfamily
J.Biol.Chem., 280, 2005
8YRJ
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BU of 8yrj by Molmil
Mouse Fc epsilon RI
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, High affinity immunoglobulin epsilon receptor subunit alpha, High affinity immunoglobulin epsilon receptor subunit beta, ...
著者Zhang, Z, Yui, M, Ohto, U, Shimizu, T.
登録日2024-03-21
公開日2024-07-17
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (3.87 Å)
主引用文献Architecture of the high-affinity immunoglobulin E receptor.
Sci.Signal., 17, 2024
8Z7B
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BU of 8z7b by Molmil
Cryo-EM structure of SARS-CoV-2 S trimer in the early fusion intermediate conformation (E-FIC) (focused refinement of NTD-SD1-RBD-ACE2)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Liu, Z, Xing, L.
登録日2024-04-19
公開日2025-02-05
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structure of SARS-CoV-2 S trimer in the early fusion intermediate conformation (E-FIC) (focused refinement of NTD-SD1-RBD-ACE2)
To Be Published
8Z7L
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BU of 8z7l by Molmil
Cryo-EM structure of SARS-CoV-2 S trimer in the early fusion intermediate conformation (E-FIC) (focused refinement of S-bottom)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Liu, Z, Xing, L.
登録日2024-04-20
公開日2025-02-05
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Cryo-EM structure of SARS-CoV-2 S trimer in the early fusion intermediate conformation (E-FIC) (focused refinement of S-bottom)
To Be Published

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件を2025-07-09に公開中

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