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PDB: 54 results

1J4E
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FRUCTOSE-1,6-BISPHOSPHATE ALDOLASE COVALENTLY BOUND TO THE SUBSTRATE DIHYDROXYACETONE PHOSPHATE
Descriptor: 1,3-DIHYDROXYACETONEPHOSPHATE, FRUCTOSE-BISPHOSPHATE ALDOLASE A
Authors:Choi, K.H, Shi, J, Hopkins, C.E, Tolan, D.R, Allen, K.N.
Deposit date:2001-09-19
Release date:2002-02-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Snapshots of catalysis: the structure of fructose-1,6-(bis)phosphate aldolase covalently bound to the substrate dihydroxyacetone phosphate.
Biochemistry, 40, 2001
1CQD
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THE 2.1 ANGSTROM STRUCTURE OF A CYSTEINE PROTEASE WITH PROLINE SPECIFICITY FROM GINGER RHIZOME, ZINGIBER OFFICINALE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PROTEIN (PROTEASE II), ...
Authors:Choi, K.H, Laursen, R.A, Allen, K.N.
Deposit date:1999-06-15
Release date:1999-09-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The 2.1 A structure of a cysteine protease with proline specificity from ginger rhizome, Zingiber officinale.
Biochemistry, 38, 1999
6J3L
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Solution structure of the N-terminal extended protuberant domain of eukaryotic ribosomal stalk protein P0
Descriptor: 60S acidic ribosomal protein P0
Authors:Choi, K.H.A, Lee, K.M, Yang, L, Wing-Heng Yu, C, Banfield, D.K, Ito, K, Uchiumi, T, Wong, K.B.
Deposit date:2019-01-04
Release date:2019-09-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural and Mutagenesis Studies Evince the Role of the Extended Protuberant Domain of Ribosomal Protein uL10 in Protein Translation.
Biochemistry, 58, 2019
6ALD
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RABBIT MUSCLE ALDOLASE A/FRUCTOSE-1,6-BISPHOSPHATE COMPLEX
Descriptor: 1,6-FRUCTOSE DIPHOSPHATE (LINEAR FORM), FRUCTOSE-1,6-BIS(PHOSPHATE) ALDOLASE
Authors:Choi, K.H, Mazurkie, A.S, Morris, A.J, Utheza, D, Tolan, D.R, Allen, K.N.
Deposit date:1998-12-23
Release date:2000-01-05
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of a fructose-1,6-bis(phosphate) aldolase liganded to its natural substrate in a cleavage-defective mutant at 2.3 A(,).
Biochemistry, 38, 1999
2CJQ
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Bovine viral diarrhea virus CP7-R12 RNA-dependent RNA polymerase
Descriptor: RNA-DIRECTED RNA POLYMERASE
Authors:Choi, K.H, Gallei, A, Becher, P, Rossmann, M.G.
Deposit date:2006-04-05
Release date:2006-07-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Structure of Bovine Viral Diarrhea Virus RNA-Dependent RNA Polymerase and its Amino-Terminal Domain.
Structure, 14, 2006
1S48
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Crystal structure of RNA-dependent RNA polymerase construct 1 (residues 71-679) from BVDV
Descriptor: RNA-dependent RNA polymerase
Authors:Choi, K.H, Groarke, J.M, Young, D.C, Kuhn, R.J, Smith, J.L, Pevear, D.C, Rossmann, M.G.
Deposit date:2004-01-15
Release date:2004-04-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1S4F
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Crystal Structure of RNA-dependent RNA polymerase construct 2 from bovine viral diarrhea virus (BVDV)
Descriptor: RNA-dependent RNA polymerase
Authors:Choi, K.H, Groarke, J.M, Young, D.C, Kuhn, R.J, Smith, J.L, Pevear, D.C, Rossmann, M.G.
Deposit date:2004-01-16
Release date:2004-04-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1S49
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Crystal Structure of RNA-dependent RNA polymerase construct 1 (residues 71-679) from bovine viral diarrhea virus complexed with GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, RNA-dependent RNA polymerase
Authors:Choi, K.H, Groarke, J.M, Young, D.C, Kuhn, R.J, Smith, J.L, Pevear, D.C, Rossmann, M.G.
Deposit date:2004-01-15
Release date:2004-04-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1C7H
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CRYSTAL STRUCTURE OF A MUTANT R75A IN KETOSTEROID ISOMERASE FROM PSEDOMONAS PUTIDA BIOTYPE B
Descriptor: DELTA-5-3-KETOSTEROID ISOMERASE
Authors:Nam, G.H, Kim, D.H, Jang, D.S, Choi, G, Ha, N.C, Oh, B.H, Choi, K.Y.
Deposit date:2000-02-19
Release date:2000-04-24
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Roles of active site aromatic residues in catalysis by ketosteroid isomerase from Pseudomonas putida biotype B.
Biochemistry, 38, 1999
1BDH
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PURINE REPRESSOR MUTANT-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX
Descriptor: DNA (5'-D(*TP*AP*CP*GP*CP*AP*AP*AP*CP*GP*TP*TP*TP*GP*CP*GP*T )-3'), HYPOXANTHINE, PROTEIN (PURINE REPRESSOR)
Authors:Glasfeld, A, Schumacher, M.A, Choi, K.Y, Zalkin, H, Brennan, R.G.
Deposit date:1996-07-25
Release date:1997-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A Positively Charged Residue Bound in the Minor Groove Does not Alter the Bending of a DNA Duplex
J.Am.Chem.Soc., 118, 1996
1BDI
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PURINE REPRESSOR MUTANT-HYPOXANTHINE-PALINDROMIC OPERATOR COMPLEX
Descriptor: DNA (5'-D(*TP*AP*CP*GP*CP*AP*AP*AP*CP*GP*TP*TP*TP*GP*CP*GP*T )-3'), HYPOXANTHINE, PROTEIN (PURINE REPRESSOR)
Authors:Glasfeld, A, Schumacher, M.A, Choi, K.Y, Zalkin, H, Brennan, R.G.
Deposit date:1996-07-25
Release date:1997-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Positively Charged Residue Bound in the Minor Groove Does not Alter the Bending of a DNA Duplex
J.Am.Chem.Soc., 118, 1996
8TSV
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Crystal structure of the Zika virus stem-loop A (SLA) top stem
Descriptor: GLYCEROL, SULFATE ION, Zika virus stem-loop A (SLA) top stem
Authors:Tipo, J, Gottipati, K, Choi, K.H.
Deposit date:2023-08-11
Release date:2024-03-06
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:High-resolution RNA tertiary structures in Zika virus stem-loop A for the development of inhibitory small molecules.
Rna, 2024
8SP9
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BU of 8sp9 by Molmil
Crystal Structure of Coxsackievirus B3 (CVB3) Cloverleaf RNA with tRNA scaffold
Descriptor: tRNA scaffold,CVB3 Cloverleaf RNA
Authors:Gottipati, K, McNeme, S.C, Choi, K.H.
Deposit date:2023-05-02
Release date:2023-08-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Structural basis for cloverleaf RNA-initiated viral genome replication.
Nucleic Acids Res., 51, 2023
8TQX
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BU of 8tqx by Molmil
Crystal structure of the Zika virus stem-loop A (SLA) bottom stem
Descriptor: GLYCEROL, MAGNESIUM ION, Zika virus stem-loop A (SLA) bottom stem
Authors:Tipo, J, Gottipati, K, Choi, K.H.
Deposit date:2023-08-08
Release date:2024-03-06
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:High-resolution RNA tertiary structures in Zika virus stem-loop A for the development of inhibitory small molecules.
Rna, 2024
1W01
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BU of 1w01 by Molmil
Crystal structure of mutant enzyme Y57F/D103L of ketosteroid isomerase from Pseudomonas putida biotype B
Descriptor: STEROID DELTA-ISOMERASE
Authors:Jang, D.S, Choi, K.Y.
Deposit date:2004-05-30
Release date:2004-07-08
Last modified:2014-02-19
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Double-Mutant Cycle Analysis of a Hydrogen Bond Network in Ketosteroid Isomerase from Pseudomonas Putida Biotype B.
Biochem.J., 382, 2004
1W02
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Crystal structure of mutant enzyme Y16F/D103L of ketosteroid isomerase from Pseudomonas putida biotype B
Descriptor: STEROID DELTA-ISOMERASE
Authors:Jang, D.S, Choi, K.Y.
Deposit date:2004-05-30
Release date:2004-07-08
Last modified:2014-02-19
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Double-Mutant Cycle Analysis of a Hydrogen Bond Network in Ketosteroid Isomerase from Pseudomonas Putida Biotype B.
Biochem.J., 382, 2004
1W00
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Crystal structure of mutant enzyme D103L of Ketosteroid Isomerase from Pseudomonas putida biotype B
Descriptor: STEROID DELTA-ISOMERASE
Authors:Kim, D.H, Jang, D.S, Nam, G.H, Oh, B.H, Choi, K.Y.
Deposit date:2004-05-30
Release date:2005-05-26
Last modified:2014-02-19
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Double-Mutant Cycle Analysis of a Hydrogen Bond Network in Ketosteroid Isomerase from Pseudomonas Putida Biotype B
Biochem.J., 382, 2004
1DMQ
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BU of 1dmq by Molmil
CRYSTAL STRUCTURE OF MUTANT ENZYME Y32F OF KETOSTEROID ISOMERASE FROM PSEUDOMONAS PUTIDA BIOTYPE B
Descriptor: STEROID DELTA-ISOMERASE
Authors:Kim, D.H, Jang, D.S, Nam, G.H, Oh, B.H, Choi, K.Y.
Deposit date:1999-12-14
Release date:2000-05-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Contribution of the hydrogen-bond network involving a tyrosine triad in the active site to the structure and function of a highly proficient ketosteroid isomerase from Pseudomonas putida biotype B.
Biochemistry, 39, 2000
1DMN
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BU of 1dmn by Molmil
CRYSTAL STRUCTURE OF MUTANT ENZYME Y32F/Y57F OF KETOSTEROID ISOMERASE FROM PSEUDOMONAS PUTIDA BIOTYPE B
Descriptor: STEROID DELTA-ISOMERASE
Authors:Kim, D.H, Jang, D.S, Nam, G.H, Oh, B.H, Choi, K.Y.
Deposit date:1999-12-14
Release date:2000-05-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Contribution of the hydrogen-bond network involving a tyrosine triad in the active site to the structure and function of a highly proficient ketosteroid isomerase from Pseudomonas putida biotype B.
Biochemistry, 39, 2000
1DMM
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CRYSTAL STRUCTURES OF MUTANT ENZYMES Y57F OF KETOSTEROID ISOMERASE FROM PSEUDOMONAS PUTIDA BIOTYPE B
Descriptor: STEROID DELTA-ISOMERASE
Authors:Kim, D.H, Jang, D.S, Nam, G.H, Oh, B.H, Choi, K.Y.
Deposit date:1999-12-14
Release date:2000-05-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Contribution of the hydrogen-bond network involving a tyrosine triad in the active site to the structure and function of a highly proficient ketosteroid isomerase from Pseudomonas putida biotype B.
Biochemistry, 39, 2000
8S95
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Crystal Structure of Poliovirus (type 1 Mahoney) cloverleaf RNA with tRNA scaffold
Descriptor: Lysine tRNA scaffold,Poliovirus cloverleaf RNA
Authors:McNeme, S.C, Choi, K.H.
Deposit date:2023-03-27
Release date:2023-08-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for cloverleaf RNA-initiated viral genome replication.
Nucleic Acids Res., 51, 2023
1VZZ
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CRYSTAL STRUCTURE OF MUTANT ENZYME Y32F/D103L OF KETOSTEROID ISOMERASE FROM PSEUDOMONAS PUTIDA BIOTYPE B
Descriptor: STEROID DELTA-ISOMERASE
Authors:Jang, D.S, Cha, H.J, Choi, K.Y.
Deposit date:2004-05-30
Release date:2004-07-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Double-Mutant Cycle Analysis of a Hydrogen Bond Network in Ketosteroid Isomerase from Pseudomonas Putida Biotype B.
Biochem.J., 382, 2004
8F2N
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Phi-29 partially-expanded fiberless prohead
Descriptor: Major capsid protein
Authors:Woodson, M.E, Morais, M.C, Scott, S.D, Choi, K.H, Jardine, P.J, Zhang, W.
Deposit date:2022-11-08
Release date:2023-11-15
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Phi-29 partially-expanded fiberless prohead
To Be Published
6VTX
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Crystal structure of human KLF4 zinc finger DNA binding domain in complex with NANOG DNA
Descriptor: DNA (5'-D(*AP*GP*GP*GP*GP*GP*TP*GP*TP*GP*CP*C)-3'), DNA (5'-D(*GP*GP*CP*AP*CP*AP*CP*CP*CP*CP*CP*T)-3'), Krueppel-like factor 4, ...
Authors:Sharma, R, Sharma, S, Choi, K.J, Ferreon, A.C.M, Ferreon, J.C, Sankaran, B, MacKenzie, K.R, Kim, C.
Deposit date:2020-02-13
Release date:2021-09-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Liquid condensation of reprogramming factor KLF4 with DNA provides a mechanism for chromatin organization.
Nat Commun, 12, 2021
1CQS
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CRYSTAL STRUCTURE OF D103E MUTANT WITH EQUILENINEOF KSI IN PSEUDOMONAS PUTIDA
Descriptor: EQUILENIN, PROTEIN : KETOSTEROID ISOMERASE
Authors:Choi, G, Ha, N.C, Kim, S.W, Kim, D.H, Park, S, Oh, B.H, Choi, K.Y.
Deposit date:1999-08-11
Release date:2003-06-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Asp-99 donates a hydrogen bond not to Tyr-14 but to the steroid directly in the catalytic mechanism of Delta 5-3-ketosteroid isomerase from Pseudomonas putida biotype B
Biochemistry, 39, 2000

 

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