PDB: 20503 件ウェブページステータス検索Chemie searchBIRD

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4D7G	Human FXIa in complex with small molecule inhibitors. 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, COAGULATION FACTOR XIA, GLYCEROL, ... 著者 Sandmark, J, Oster, L, Jacso, T, Ullah, V, Redzick, A, Borjesson, U, Olsson, T, Norberg, M, Akerud, T. 登録日 2014-11-24 公開日 2016-01-20 実験手法 X-RAY DIFFRACTION (2.33 Å) 主引用文献 From Mm Fragments to Nm Compounds Using Iloe-NMR to Guide Linking of Compounds in Fragment Based Drug Discovery (Fbdd). To be Published
6UD0	Solution-state NMR structural ensemble of human Tsg101 UEV in complex with K63-linked diubiquitin 分子名称: Tumor susceptibility gene 101 protein, Ubiquitin 著者 Strickland, M, Watanabe, S, Bonn, S.M, Camara, C.M, Fushman, D, Carter, C.A, Tjandra, N. 登録日 2019-09-18 公開日 2021-03-17 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Tsg101/ESCRT-I Recruitment Regulated by the Dual Binding Modes of K63-Linked Diubiquitin Structure, 2021
3ZBE	E. coli O157 ParE2-associated antitoxin 2 (PaaA2) 分子名称: PAAA2 著者 Sterckx, Y.G.J, Van Nuland, N.A.J, Vranken, W.F, Loris, R. 登録日 2012-11-08 公開日 2014-01-15 最終更新日 2024-01-31 実験手法 SOLUTION NMR 主引用文献 Small-Angle X-Ray Scattering- and Nuclear Magnetic Resonance-Derived Conformational Ensemble of the Highly Flexible Antitoxin Paaa2. Structure, 22, 2014
6TRM	Solution structure of the antifungal protein PAFC 分子名称: Pc21g12970 protein 著者 Czajlik, A, Holzknecht, J, Marx, F, Batta, G. 登録日 2019-12-19 公開日 2020-10-28 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Solution Structure, Dynamics, and New Antifungal Aspects of the Cysteine-Rich Miniprotein PAFC. Int J Mol Sci, 22, 2021
7NWD	Three-quartet c-kit2 G-quadruplex stabilized by a pyrene conjugate 分子名称: POTASSIUM ION, c-kit2_py1 著者 Peterkova, K, Durnik, I, Marek, R, Plavec, J, Podbevsek, P. 登録日 2021-03-16 公開日 2021-08-04 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 c-kit2 G-quadruplex stabilized via a covalent probe: exploring G-quartet asymmetry. Nucleic Acids Res., 49, 2021
1MP7	A Third Complex of Post-Activated Neocarzinostatin Chromophore with DNA. Bulge DNA Binding from the Minor Groove 分子名称: 5'-D(*GP*CP*CP*AP*GP*AP*GP*AP*GP*C)-3', [(R)-4-((1,3-DIOXOLANE-2-OXY)-4-(S)-YL)-4-HYDROXY]-(R)-10-(2-METHYLAMINO-5-METHYL-2,6-DIDEOXYGALACTOPYRANOSYL-OXY)-(R)-11-(2-HYDROXY-5-METHYL-7-METHOXY-1-NAPHTHOYL-OXY)-(R)-12-S-GLUTATHIONYL-4,10,11,12-TETRAHYDROINDACENE 著者 Kwon, Y, Xi, Z, Kappen, L.S, Goldberg, I.H, Gao, X. 登録日 2002-09-11 公開日 2003-02-18 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 New Complex of Post-Activated Neocarzinostatin Chromophore with DNA: Bulge DNA Binding from the Minor Groove Biochemistry, 42, 2003
5L2G	Solution Structure of a DNA Dodecamer with 5-methylcytosine at the 9th Position 分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(5CM)P*GP*CP*G)-3') 著者 Miears, H.L, Hoppins, J.J, Gruber, D.R, Kasymov, R.D, Johnson, E.C, Zharkov, D.O, Smirnov, S.L. 登録日 2016-08-01 公開日 2016-12-21 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Oxidative damage to epigenetically methylated sites affects DNA stability, dynamics and enzymatic demethylation. Nucleic Acids Res., 46, 2018
1MFK	Structure of Prokaryotic SECIS mRNA Hairpin 分子名称: 5'-R(P*GP*GP*CP*GP*GP*UP*UP*GP*CP*AP*GP*GP*UP*CP*UP*GP*CP*AP*CP*CP*GP*CP*C)-3' 著者 Fourmy, D, Guittet, E, Yoshizawa, S. 登録日 2002-08-12 公開日 2002-11-13 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structure of Prokaryotic SECIS mRNA Hairpin and its Interaction with Elongation Factor SELB J.Mol.Biol., 324, 2002
1MA5	Tachyplesin I solution structure in the presence of 300mM Dodecylphosphocholine micelles 分子名称: Tachyplesin 1 著者 Laederach, A, Andreotti, A.H, Fulton, D.B. 登録日 2002-07-31 公開日 2002-10-16 最終更新日 2022-02-23 実験手法 SOLUTION NMR 主引用文献 Solution and micelle-bound structures of tachyplesin I and its active linear derivatives Biochemistry, 41, 2002
1VNB	PROTON NUCLEAR MAGNETIC RESONANCE AND DISTANCE GEOMETRY(SLASH)SIMULATED ANNEALING STUDIES ON THE VARIANT-1 NEUROTOXIN FROM THE NEW WORLD SCORPION CENTRUROIDES SCULPTURATUS EWING 分子名称: NEUROTOXIN 著者 Lee, W, Krishna, N.R. 登録日 1993-10-26 公開日 1994-01-31 最終更新日 2022-03-02 実験手法 SOLUTION NMR 主引用文献 Proton nuclear magnetic resonance and distance geometry/simulated annealing studies on the variant-1 neurotoxin from the New World scorpion Centruroides sculpturatus Ewing. Biochemistry, 33, 1994
1VNA	PROTON NUCLEAR MAGNETIC RESONANCE AND DISTANCE GEOMETRY(SLASH)SIMULATED ANNEALING STUDIES ON THE VARIANT-1 NEUROTOXIN FROM THE NEW WORLD SCORPION CENTRUROIDES SCULPTURATUS EWING 分子名称: NEUROTOXIN 著者 Lee, W, Krishna, N.R. 登録日 1993-10-26 公開日 1994-01-31 最終更新日 2022-03-02 実験手法 SOLUTION NMR 主引用文献 Proton nuclear magnetic resonance and distance geometry/simulated annealing studies on the variant-1 neurotoxin from the New World scorpion Centruroides sculpturatus Ewing. Biochemistry, 33, 1994
1MFY	SOLUTION STRUCTURE OF INFLUENZA A VIRUS C4 PROMOTER 分子名称: C4 promoter of influneza A virus 著者 Lee, M.-K, Bae, S.-H, Park, C.-J, Cheong, H.-K, Cheong, C, Choi, B.-S. 登録日 2002-08-14 公開日 2002-09-18 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 A single-nucleotide natural variation (U4 to C4) in an influenza A virus promoter exhibits a large structural change: implications for differential viral RNA synthesis by RNA-dependent RNA polymerase. Nucleic Acids Res., 31, 2003
1MR6	Solution Structure of gamma-Bungarotoxin:Implication for the role of the Residues Adjacent to RGD in Integrin Binding 分子名称: neurotoxin 著者 Chuang, W.-J, Shiu, J.-H, Chen, C.-Y, Chen, Y.-C, Chang, L.-S. 登録日 2002-09-18 公開日 2004-05-18 最終更新日 2022-02-23 実験手法 SOLUTION NMR 主引用文献 Solution structure of gamma-bungarotoxin: The functional significance of amino acid residues flanking the RGD motif in integrin binding Proteins, 57, 2004
1MX8	Two homologous rat cellular retinol-binding proteins differ in local structure and flexibility 分子名称: CELLULAR RETINOL-BINDING PROTEIN I, HOLO, RETINOL 著者 Lu, J, Cistola, D.P, Li, E. 登録日 2002-10-01 公開日 2003-07-29 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Two homologous rat cellular retinol-binding proteins differ in local conformational flexibility. J.Mol.Biol., 330, 2003
1MXP	Solution structure of the ribbon disulfide bond isomer of alpha-conotoxin AuIB 分子名称: alpha-conotoxin AuIB 著者 Dutton, J.L, Bansal, P.S, Hogg, R.C, Adams, D.J, Alewood, P.F, Craik, D.J. 登録日 2002-10-03 公開日 2002-12-30 最終更新日 2022-02-23 実験手法 SOLUTION NMR 主引用文献 A New Level of Conotoxin Diversity, a Non-native Disulfide Bond Connectivity in alpha -Conotoxin AuIB Reduces Structural Definition but Increases Biological Activity. J.Biol.Chem., 277, 2002
1N09	A minimal beta-hairpin peptide scaffold for beta-turn display 分子名称: bhpW, disulfide cyclized beta-hairpin peptide 著者 Russell, S.J, Blandl, T, Skelton, N.J, Cochran, A.G. 登録日 2002-10-11 公開日 2003-02-04 最終更新日 2022-02-23 実験手法 SOLUTION NMR 主引用文献 Stability of cyclic beta-hairpins: asymmetric contributions from side chains of a hydrogen-bonded cross-strand residue pair J.Am.Chem.Soc., 125, 2003
7BQS	Solution NMR structure of fold-U Nomur; de novo designed protein with an asymmetric all-alpha topology 分子名称: Nomur 著者 Kobayashi, N, Nagashima, T, Sakuma, K, Kosugi, T, Koga, R, Koga, N. 登録日 2020-03-25 公開日 2021-04-07 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Design of complicated all-alpha protein structures Nat.Struct.Mol.Biol., 2024
7BQR	Solution NMR structure of fold-K Mussoc; de novo designed protein with an asymmetric all-alpha topology 分子名称: Mussoc 著者 Kobayashi, N, Nagashima, T, Sakuma, K, Kosugi, T, Koga, R, Koga, N. 登録日 2020-03-25 公開日 2021-04-07 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Design of complicated all-alpha protein structures Nat.Struct.Mol.Biol., 2024
6K5W	Solution structure of the chromodomain of yeast Eaf3 分子名称: Chromatin modification-related protein EAF3 著者 Okuda, M, Nishimura, Y. 登録日 2019-05-31 公開日 2020-02-26 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 The Eaf3 chromodomain acts as a pH sensor for gene expression by altering its binding affinity for histone methylated-lysine residues. Biosci.Rep., 40, 2020
8K3N	Solution NMR structure of cis X-Pro peptide bond conformer of a single disulfide conopeptide Mo1853 分子名称: Mo1853 著者 Kancherla, A.K, Sarma, S.P. 登録日 2023-07-16 公開日 2023-12-06 実験手法 SOLUTION NMR 主引用文献 Solution structures and thermodynamics of cis-trans X-Pro conformers of a novel single disulfide conopeptide. Indian J.Biochem.Biophys., 60, 2023
8K3M	Solution NMR structure of trans X-Pro peptide bond conformer of a single disulfide conopeptide Mo1853 分子名称: Mo1853 著者 Kancherla, A.K, Sarma, S.P. 登録日 2023-07-16 公開日 2023-12-06 実験手法 SOLUTION NMR 主引用文献 Solution structures and thermodynamics of cis-trans X-Pro conformers of a novel single disulfide conopeptide. Indian J.Biochem.Biophys., 60, 2023
7Z9L	Phen-DC3 intercalation causes hybrid-to-antiparallel transformation of human telomeric DNA G-quadruplex 分子名称: DNA (5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), N2,N9-bis(1-methylquinolin-3-yl)-1,10-phenanthroline-2,9-dicarboxamide 著者 Ghosh, A, Trajkovski, M, Teulade-Fichou, M.P, Gabelica, V, Plavec, J. 登録日 2022-03-21 公開日 2022-08-31 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Phen-DC 3 Induces Refolding of Human Telomeric DNA into a Chair-Type Antiparallel G-Quadruplex through Ligand Intercalation. Angew.Chem.Int.Ed.Engl., 61, 2022
6LZP	The solution structure of N-terminal elongated hSNF5 RPT1 domain 分子名称: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 著者 Lee, W, Han, J, Kim, I, Suh, J.Y. 登録日 2020-02-19 公開日 2020-12-30 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 A Coil-to-Helix Transition Serves as a Binding Motif for hSNF5 and BAF155 Interaction. Int J Mol Sci, 21, 2020
3NCM	NEURAL CELL ADHESION MOLECULE, MODULE 2, NMR, 20 STRUCTURES 分子名称: PROTEIN (NEURAL CELL ADHESION MOLECULE, LARGE ISOFORM) 著者 Jensen, P.H, Soroka, V, Thomsen, N.K, Berezin, V, Bock, E, Poulsen, F.M. 登録日 1998-09-21 公開日 1999-07-23 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 Structure and interactions of NCAM modules 1 and 2, basic elements in neural cell adhesion Nat.Struct.Biol., 6, 1999
6MJV	A consensus human beta defensin 分子名称: Human beta-defensin 著者 Amero, C, Villegas-Moreno, J, Rodriguez, A, Norton, R.S, Corzo, G. 登録日 2018-09-22 公開日 2019-08-28 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Antimicrobial activity and structure of a consensus human beta-defensin and its comparison to a novel putative hBD10. Proteins, 88, 2020

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