PDB: 238582 件ウェブページステータス検索Chemie searchBIRD

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9BOW	X-ray structure of Thermus thermophilus serine hydroxymethyltransferase with PLP-L-Ser external aldimine and 5-formyltetrahydrofolate (folinic acid) 分子名称: (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-serine, N-[4-({[(6S)-2-amino-5-formyl-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid, SERINE, ... 著者 Drago, V.N, Kovalevsky, A. 登録日 2024-05-06 公開日 2024-08-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Universality of critical active site glutamate as an acid-base catalyst in serine hydroxymethyltransferase function. Chem Sci, 15, 2024
6L1G	Crystal structure of light-dependent protochlorophyllide oxidoreductase from Synechocystis sp. PCC 6803 分子名称: Light-dependent protochlorophyllide reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION 著者 Dong, C, Wang, X, Liu, L. 登録日 2019-09-29 公開日 2020-04-01 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structures of cyanobacterial light-dependent protochlorophyllide oxidoreductase. Proc.Natl.Acad.Sci.USA, 117, 2020
9BPE	Joint X-ray/neutron structure of Thermus thermophilus serine hydroxymethyltransferase (TthSHMT) in internal aldimine state and folinic acid bound 分子名称: ACETATE ION, N-[4-({[(6S)-2-amino-5-formyl-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid, SULFATE ION, ... 著者 Drago, V.N, Kovalevsky, A. 登録日 2024-05-07 公開日 2024-08-28 実験手法 NEUTRON DIFFRACTION (2.3 Å), X-RAY DIFFRACTION 主引用文献 Universality of critical active site glutamate as an acid-base catalyst in serine hydroxymethyltransferase function. Chem Sci, 15, 2024
5K5P	Crystal structure of Staphylococcal nuclease variant Delta+PHS I72K L103K at cryogenic temperature 分子名称: THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease 著者 Sorenson, J.L, Schlessman, J.L, Garcia-Moreno E, B. 登録日 2016-05-23 公開日 2016-06-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Crystal structure of Staphylococcal nuclease variant Delta+PHS I72K L103K at cryogenic temperature To Be Published
9BF5	Structure of V. cholerae DdmD in complex with ssDNA 分子名称: Helicase/UvrB N-terminal domain-containing protein, ssDNA1, ssDNA2 著者 Shen, Z.F, Yang, X.Y, Fu, T.M. 登録日 2024-04-16 公開日 2024-09-04 最終更新日 2025-05-28 実験手法 ELECTRON MICROSCOPY (3.07 Å) 主引用文献 DdmDE eliminates plasmid invasion by DNA-guided DNA targeting. Cell, 187, 2024
2IC9	The Coiled-coil Domain (residues 1-93) Structure of the Sin Nombre Virus Nucleocapsid Protein 分子名称: Nucleocapsid protein 著者 Boudko, S.P, Rossmann, M.G. 登録日 2006-09-12 公開日 2007-02-27 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The Coiled-coil Domain Structure of the Sin Nombre Virus Nucleocapsid Protein. J.Mol.Biol., 366, 2007
9BGO	Pseudomonas phage DEV gp72 ejection protein (pre-ejection conformation) 分子名称: gp72 著者 Iglesias, S.M, Hou, C.F.D, Li, F, Cingolani, G. 登録日 2024-04-19 公開日 2024-09-04 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Integrative structural analysis of Pseudomonas phage DEV reveals a genome ejection motor. Nat Commun, 15, 2024
1LKC	Crystal Structure of L-Threonine-O-3-Phosphate Decarboxylase from Salmonella enterica 分子名称: 1,2-ETHANEDIOL, L-threonine-O-3-phosphate decarboxylase, PHOSPHATE ION, ... 著者 Cheong, C.G, Bauer, C.B, Brushaber, K.R, Escalante-Semerena, J.C, Rayment, I. 登録日 2002-04-24 公開日 2002-05-01 最終更新日 2025-03-26 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Three-dimensional structure of the L-threonine-O-3-phosphate decarboxylase (CobD) enzyme from Salmonella enterica. Biochemistry, 41, 2002
9BJF	Tungstate binding protein (Tungbindin) from Eubacterium limosum in apo form 分子名称: Molybdenum-pterin binding domain-containing protein, SULFATE ION 著者 Zhou, D, Rose, J.P, Chen, L, Wang, B.C. 登録日 2024-04-25 公開日 2024-09-04 最終更新日 2025-04-23 実験手法 X-RAY DIFFRACTION (2.89 Å) 主引用文献 Storage of the vital metal tungsten in a dominant SCFA-producing human gut microbe Eubacterium limosum and implications for other gut microbes. Mbio, 16, 2025
9BKA	Crystal structure of Rid family protein PSPTO3006 分子名称: Rid family protein PSPTO3006 著者 Zhou, D, Chen, L, Rose, J.P, Wang, B.C. 登録日 2024-04-26 公開日 2024-09-04 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Crystal structure of Rid family protein PSPTO3006 To Be Published
5KAL	Terminal uridylyl transferase 4 from Trypanosoma brucei with bound UTP and UpU 分子名称: MAGNESIUM ION, RNA (5'-R(*UP*U)-3'), RNA uridylyltransferase 4, ... 著者 Stagno, J.R, Luecke, H, Afasizhev, R. 登録日 2016-06-01 公開日 2016-10-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 RNA Editing TUTase 1: structural foundation of substrate recognition, complex interactions and drug targeting. Nucleic Acids Res., 44, 2016
9BKB	Crystal structure of Rid family protein ACIAD3089 from Acinetobacter baylyi 分子名称: Rid family protein ACIAD3089 著者 Zhou, D, Chen, L, Rose, J.P, Wang, B.C. 登録日 2024-04-26 公開日 2024-09-04 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure of Rid family protein ACIAD3089 from Acinetobacter baylyi To Be Published
5KB2	Crystal Structure of a Tris-thiolate Zn(II)S3O Complex in a de Novo Three-stranded Coiled Coil Peptide 分子名称: ZINC ION, Zn(II)(H2O)(GRAND Coil Ser-L12AL16C)3- 著者 Ruckthong, L, Zastrow, M.L, Stuckey, J.A, Pecoraro, V.L. 登録日 2016-06-02 公開日 2016-08-31 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 A Crystallographic Examination of Predisposition versus Preorganization in de Novo Designed Metalloproteins. J.Am.Chem.Soc., 138, 2016
6THB	Receptor binding domain of the Cedar Virus attachment glycoprotein (G) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Attachment glycoprotein 著者 Pryce, R, Rissanen, I, Harlos, K, Bowden, T. 登録日 2019-11-19 公開日 2019-12-18 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (2.78 Å) 主引用文献 A key region of molecular specificity orchestrates unique ephrin-B1 utilization by Cedar virus. Life Sci Alliance, 3, 2020
6ZJQ	Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant E517Q in complex with galactose 分子名称: ACETATE ION, Beta-galactosidase, MALONATE ION, ... 著者 Rutkiewicz, M, Bujacz, A, Bujacz, G. 登録日 2020-06-29 公開日 2020-08-05 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Mapping the Transglycosylation Relevant Sites of Cold-Adapted beta-d-Galactosidase fromArthrobactersp. 32cB. Int J Mol Sci, 21, 2020
2ICI	Crystal Structure of Streptococcal Pyrogenic Exotoxin I 分子名称: Exotoxin I, MAGNESIUM ION 著者 Gunther, S, Varma, A.K, Sundberg, E.J. 登録日 2006-09-12 公開日 2007-03-27 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.56 Å) 主引用文献 Crystal Structure of the Streptococcal Superantigen SpeI and Functional Role of a Novel Loop Domain in T Cell Activation by Group V Superantigens. J.Mol.Biol., 367, 2007
9BPA	Human DNA polymerase theta helicase domain in complex with inhibitor AB25583, tetramer form 分子名称: (4P)-N-{5-[(4-chlorophenyl)methoxy]-1,3,4-thiadiazol-2-yl}-4-(2-methoxyphenyl)pyridine-3-carboxamide, DNA polymerase theta 著者 Ito, F, Li, Z, Chen, X.S. 登録日 2024-05-07 公開日 2024-08-28 実験手法 ELECTRON MICROSCOPY (3.21 Å) 主引用文献 Structural basis for a Pol theta helicase small-molecule inhibitor revealed by cryo-EM. Nat Commun, 15, 2024
2ICW	Crystal structure of a complete ternary complex between TCR, superantigen, and peptide-MHC class II molecule 分子名称: HLA class II histocompatibility antigen, DR alpha chain, DRB1-1 beta chain, ... 著者 Wang, L, Zhao, Y, Li, H. 登録日 2006-09-13 公開日 2007-03-20 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (2.41 Å) 主引用文献 Crystal structure of a complete ternary complex of TCR, superantigen and peptide-MHC. Nat.Struct.Mol.Biol., 14, 2007
1LLR	CHOLERA TOXIN B-PENTAMER WITH LIGAND BMSC-0012 分子名称: 3-AMINO-4-{3-[2-(2-PROPOXY-ETHOXY)-ETHOXY]-PROPYLAMINO}-CYCLOBUT-3-ENE-1,2-DIONE, 5-aminocarbonyl-3-nitrophenyl alpha-D-galactopyranoside, CHOLERA TOXIN B SUBUNIT 著者 Merritt, E.A, Hol, W.G.J. 登録日 2002-04-30 公開日 2002-08-14 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.46 Å) 主引用文献 Characterization and crystal structure of a high-affinity pentavalent receptor-binding inhibitor for cholera toxin and E. coli heat-labile enterotoxin. J.Am.Chem.Soc., 124, 2002
9BGN	Pseudomonas phage DEV 5-fold vertex (major coat protein) 分子名称: gp77 major coat protein 著者 Iglesias, S.M, Hou, C.F.D, Li, F, Cingolani, G. 登録日 2024-04-19 公開日 2024-09-04 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Integrative structural analysis of Pseudomonas phage DEV reveals a genome ejection motor. Nat Commun, 15, 2024
6ZJW	Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant D207A in complex with galactose 分子名称: Beta-galactosidase, beta-D-galactopyranose 著者 Rutkiewicz, M, Bujacz, A, Bujacz, G. 登録日 2020-06-29 公開日 2020-08-05 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.119 Å) 主引用文献 Mapping the Transglycosylation Relevant Sites of Cold-Adapted beta-d-Galactosidase fromArthrobactersp. 32cB. Int J Mol Sci, 21, 2020
9BJV	Crystal structure of hypothetical protein PA5083 from Pseudomonas aeruginosa Sulfur SAD phased 分子名称: RidA family protein PA5083 著者 Zhou, D, Chen, L, Rose, J.P, Wang, B.C. 登録日 2024-04-25 公開日 2024-09-04 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of the Rid protein PA5083 from Pseudomonas aeruginosa (Apo form) solved by Sulfur SAD To Be Published
9BK4	Crystal structure of RidA family protein PA5083 from Pseudomonas aeruginosa with pyruvic acid bound 分子名称: PYRUVIC ACID, RidA family protein PA5083, SULFATE ION 著者 Zhou, D, Chen, L, Rose, J.P, Wang, B.C. 登録日 2024-04-26 公開日 2024-09-04 実験手法 X-RAY DIFFRACTION (2.08 Å) 主引用文献 Crystal structure of RidA family protein PA5083 from Pseudomonas aeruginosa with pyruvic acid bound To Be Published
5K79	Structure and anti-HIV activity of CYT-CVNH, a new cyanovirin-n homolog 分子名称: 1,2-ETHANEDIOL, Cyanovirin-N domain protein, DI(HYDROXYETHYL)ETHER 著者 Matei, E, Basu, R, Furey, W, Shi, J, Calnan, C, Aiken, C, Gronenborn, A.M. 登録日 2016-05-25 公開日 2016-07-20 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structure and Glycan Binding of a New Cyanovirin-N Homolog. J.Biol.Chem., 291, 2016
9BK2	Crystal structure of Lactate dehydrogenase in complex with 4-((4-(1-methyl-1H-imidazole-2-carbonyl)phenyl)amino)-4-oxo-2-(4-(trifluoromethyl)phenyl)butanoic acid (S-enantiomer, monoclinic P form) 分子名称: (2S)-4-[4-(1-methyl-1H-imidazole-2-carbonyl)anilino]-4-oxo-2-[4-(trifluoromethyl)phenyl]butanoic acid, DIMETHYL SULFOXIDE, L-lactate dehydrogenase A chain, ... 著者 Lovell, S, Cooper, A, Battaile, K.P, Sharma, H. 登録日 2024-04-26 公開日 2024-07-10 最終更新日 2024-09-04 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Synthesis and biological characterization of an orally bioavailable lactate dehydrogenase-A inhibitor against pancreatic cancer. Eur.J.Med.Chem., 275, 2024

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