5M1D

Crystal structure of N-terminally tagged UbiD from E. coli reconstituted with prFMN cofactor

Summary for 5M1D

Entry DOI	10.2210/pdb5m1d/pdb
Descriptor	3-octaprenyl-4-hydroxybenzoate carboxy-lyase, MANGANESE (II) ION, 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-y l)-D-ribitol, ... (6 entities in total)
Functional Keywords	ubid, decarboxylase, ubiquinone biosynthesis, prfmn binding, lyase
Biological source	Escherichia coli
Cellular location	Cell membrane ; Peripheral membrane protein : P0AAB5
Total number of polymer chains	3
Total formula weight	175416.76
Authors	Marshall, S.A.,Leys, D. (deposition date: 2016-10-07, release date: 2017-01-11, Last modification date: 2024-01-17)
Primary citation	Marshall, S.A.,Fisher, K.,Ni Cheallaigh, A.,White, M.D.,Payne, K.A.,Parker, D.A.,Rigby, S.E.,Leys, D. Oxidative Maturation and Structural Characterization of Prenylated FMN Binding by UbiD, a Decarboxylase Involved in Bacterial Ubiquinone Biosynthesis. J. Biol. Chem., 292:4623-4637, 2017 Cited by PubMed: 28057757 DOI: 10.1074/jbc.M116.762732 PDB entries with the same primary citation
Experimental method	X-RAY DIFFRACTION (2.7 Å)

Structure validation