5M1D
Crystal structure of N-terminally tagged UbiD from E. coli reconstituted with prFMN cofactor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-05-01 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.044 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 194.199, 194.199, 107.598 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 137.320 - 2.700 |
R-factor | 0.196 |
Rwork | 0.195 |
R-free | 0.22600 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5m1c |
RMSD bond length | 0.012 |
RMSD bond angle | 1.608 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 137.320 | 2.770 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 1.232 | |
Number of reflections | 54077 | |
<I/σ(I)> | 13.6 | 1.6 |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 7.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 294 | 0.1 mM SPG pH 8, 25% w/v PEG 1500 |