Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1ME6
DownloadVisualize
BU of 1me6 by Molmil
CRYSTAL STRUCTURE OF PLASMEPSIN II, AN ASPARTYL PROTEASE FROM PLASMODIUM FALCIPARUM, IN COMPLEX WITH A STATINE-BASED INHIBITOR
分子名称: 3-HYDROXY-6-METHYL-4-(3-METHYL-2-(3-METHYL-2-(3-METHYL-BUTYRYLAMINO)-BUTYRYLAMINO)-BUTYRYLAMINO)-HEPTANOIC ACID ETHYL ESTER, Plasmepsin II
著者Freire, E, Nezami, A.G, Amzel, L.M.
登録日2002-08-08
公開日2004-01-20
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献CRYSTAL STRUCTURE OF PLASMEPSIN II, AN ASPARTYL PROTEASE FROM PLASMODIUM FALCIPARUM, IN COMPLEX WITH A STATINE-BASED INHIBITOR
TO BE PUBLISHED
6Z2P
DownloadVisualize
BU of 6z2p by Molmil
Crystal structure of catalytic inactive OgpA from Akkermansia muciniphila in complex with an O-glycopeptide (glycodrosocin) substrate
分子名称: CALCIUM ION, Glycodrosocin, O-glycan protease, ...
著者Trastoy, B, Naegali, A, Anso, I, Sjogren, J, Guerin, M.E.
登録日2020-05-18
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Structural basis of mammalian mucin processing by the human gut O-glycopeptidase OgpA from Akkermansia muciniphila.
Nat Commun, 11, 2020
1MI4
DownloadVisualize
BU of 1mi4 by Molmil
Glyphosate insensitive G96A mutant EPSP synthase liganded with shikimate-3-phosphate
分子名称: 5-enolpyruvylshikimate-3-phosphate synthase, FORMIC ACID, SHIKIMATE-3-PHOSPHATE
著者Eschenburg, S, Healy, M.L, Priestman, M.A, Lushington, G.H, Schonbrunn, E.
登録日2002-08-21
公開日2002-12-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献How the mutation glycine96 to alanine confers glyphosate insensitivity to 5-enolpyruvyl shikimate-3-phosphate synthase from Escherichia coli.
PLANTA, 216, 2002
6Z3R
DownloadVisualize
BU of 6z3r by Molmil
Structure of SMG1-8-9 kinase complex bound to UPF1-LSQ
分子名称: ADENOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, MAGNESIUM ION, ...
著者Langer, L.M, Gat, Y, Conti, E.
登録日2020-05-21
公開日2020-06-24
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.97 Å)
主引用文献Structure of substrate-bound SMG1-8-9 kinase complex reveals molecular basis for phosphorylation specificity.
Elife, 9, 2020
7M1E
DownloadVisualize
BU of 7m1e by Molmil
Structural and functional studies about scorpine showed the presence of blocking channel and cytolytic activities as well as two different structural domains
分子名称: Scorpine
著者del Rio, J.F, Lopez, A.E, Titaux, G.
登録日2021-03-12
公開日2022-01-19
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural and functional studies of scorpine: A channel blocker and cytolytic peptide.
Toxicon, 222, 2022
1MMT
DownloadVisualize
BU of 1mmt by Molmil
Crystal structure of ternary complex of the catalytic domain of human phenylalanine hydroxylase (Fe(II)) complexed with tetrahydrobiopterin and norleucine
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, FE (II) ION, NORLEUCINE, ...
著者Andersen, O.A, Flatmark, T, Hough, E.
登録日2002-09-04
公開日2003-09-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献2.0A resolution crystal structures of the ternary complexes of human phenylalanine hydroxylase catalytic domain with tetrahydrobiopterin and 3-(2-thienyl)-L-alanine or L-norleucine: substrate specificity and molecular motions related to substrate binding
J.Mol.Biol., 333, 2003
1MQB
DownloadVisualize
BU of 1mqb by Molmil
Crystal Structure of Ephrin A2 (ephA2) Receptor Protein Kinase
分子名称: Ephrin type-A receptor 2, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Nowakowski, J, Cronin, C.N, McRee, D.E, Knuth, M.W, Nelson, C, Pavletich, N, Rogers, J, Sang, B.C, Scheibe, D.N, Swanson, R.V, Thompson, D.A.
登録日2002-09-16
公開日2003-09-16
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structures of the Cancer Related Aurora-A, FAK and EphA2 Protein Kinases from Nanovolume Crystallography
Structure, 10, 2003
6ZDV
DownloadVisualize
BU of 6zdv by Molmil
Crystal structure of stabilized A2A adenosine receptor A2AR-StaR2-bRIL in complex with Chromone 5d
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Adenosine receptor A2a,Soluble cytochrome b562,Adenosine receptor A2a, ...
著者Verdon, G, Jespers, W, Azuaje, J, Majellaro, M, Keranen, H, Garcia-mera, X, Congreve, M, Deflorian, F, de Graaf, C, Zhukov, A, Dore, A, Mason, J, Aqvist, J, Cooke, R, Sotelo, E, Gutierrez-de-Teran, H.
登録日2020-06-15
公開日2020-09-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献X-Ray Crystallography and Free Energy Calculations Reveal the Binding Mechanism of A 2A Adenosine Receptor Antagonists.
Angew.Chem.Int.Ed.Engl., 59, 2020
6ZHK
DownloadVisualize
BU of 6zhk by Molmil
Crystal structure of adenosylmethionine-8-amino-7-oxononanoate aminotransferase from Methanocaldococcus jannaschii DSM 2661
分子名称: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, MAGNESIUM ION
著者Boyko, K.M, Nikolaeva, T.N, Stekhanova, T.N, Rakitina, T.V, Bezsudnova, E.Y, Popov, V.O.
登録日2020-06-23
公開日2020-07-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Three-Dimensional Structure of Thermostable D-Amino Acid Transaminase from the Archaeon Methanocaldococcus jannaschii DSM 2661
Crystallography Reports, 2021
2XJ6
DownloadVisualize
BU of 2xj6 by Molmil
The structure of ferrous ascorbate peroxidase
分子名称: ASCORBATE PEROXIDASE, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Gumiero, A, Raven, E.L, Moody, P.C.E.
登録日2010-07-02
公開日2010-07-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Nature of the ferryl heme in compounds I and II.
J. Biol. Chem., 286, 2011
6ZHB
DownloadVisualize
BU of 6zhb by Molmil
3D electron diffraction structure of bovine insulin
分子名称: Insulin, ZINC ION
著者Blum, T, Housset, D, Clabbers, M.T.B, van Genderen, E, Bacia-Verloop, M, Zander, U, McCarthy, A.A, Schoehn, G, Ling, W.L, Abrahams, J.P.
登録日2020-06-22
公開日2021-01-27
最終更新日2024-01-24
実験手法ELECTRON CRYSTALLOGRAPHY (3.25 Å)
主引用文献Statistically correcting dynamical electron scattering improves the refinement of protein nanocrystals, including charge refinement of coordinated metals.
Acta Crystallogr D Struct Biol, 77, 2021
2Y22
DownloadVisualize
BU of 2y22 by Molmil
Human AlphaB-crystallin Domain (residues 67-157)
分子名称: ALPHA-CRYSTALLIN B
著者Naylor, C.E, Bagneris, C, Clark, A.R, Keep, N.H, Slingsby, C.
登録日2010-12-13
公開日2011-03-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Crystal Structure of R120G Disease Mutant of Human Alphab-Crystallin Domain Dimer Shows Closure of a Groove
J.Mol.Biol., 408, 2011
6DPW
DownloadVisualize
BU of 6dpw by Molmil
Undecorated GTPgammaS microtubule
分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Zhang, R, Nogales, E.
登録日2018-06-09
公開日2018-07-04
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Separating the effects of nucleotide and EB binding on microtubule structure.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6ZDX
DownloadVisualize
BU of 6zdx by Molmil
RIFIN variable region bound to LILRB1 ectodomain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Leukocyte immunoglobulin-like receptor subfamily B member 1, ...
著者Harrison, T.E, Higgins, M.K.
登録日2020-06-15
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for RIFIN-mediated activation of LILRB1 in malaria.
Nature, 587, 2020
1MKY
DownloadVisualize
BU of 1mky by Molmil
Structural Analysis of the Domain Interactions in Der, a Switch Protein Containing Two GTPase Domains
分子名称: GUANOSINE-5'-DIPHOSPHATE, PHOSPHATE ION, Probable GTP-binding protein engA
著者Robinson, V.L, Hwang, J, Fox, E, Inouye, M, Stock, A.M.
登録日2002-08-29
公開日2003-01-14
最終更新日2015-02-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Domain Arrangement of Der, a Switch Protein Containing Two GTPase Domains
Structure, 10, 2002
2XND
DownloadVisualize
BU of 2xnd by Molmil
Crystal structure of bovine F1-c8 sub-complex of ATP Synthase
分子名称: ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIAL, ATP SYNTHASE SUBUNIT ALPHA, ...
著者Watt, I.N, Montgomery, M.G, Runswick, M.J, Leslie, A.G.W, Walker, J.E.
登録日2010-08-02
公開日2010-09-15
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Bioenergetic Cost of Making an Adenosine Triphosphate Molecule in Animal Mitochondria.
Proc.Natl.Acad.Sci.USA, 107, 2010
2XQ1
DownloadVisualize
BU of 2xq1 by Molmil
Crystal structure of peroxisomal catalase from the yeast Hansenula polymorpha
分子名称: PEROXISOMAL CATALASE, PROTOPORPHYRIN IX CONTAINING FE
著者Penya-Soler, E, Vega, M.C, Wilmanns, M, Williams, C.P.
登録日2010-08-31
公開日2011-06-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural Features of Peroxisomal Catalase from the Yeast Hansenula Polymorpha
Acta Crystallogr.,Sect.D, 67, 2011
6ZJE
DownloadVisualize
BU of 6zje by Molmil
Crystal structure of human adenylate kinase 3, AK3, in complex with inhibitor Ap5A
分子名称: BIS(ADENOSINE)-5'-PENTAPHOSPHATE, CHLORIDE ION, GTP:AMP phosphotransferase AK3, ...
著者Grundstrom, C, Rogne, P, Wolf-Watz, M, Sauer-Eriksson, A.E.
登録日2020-06-28
公開日2020-09-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Structural Basis for GTP versus ATP Selectivity in the NMP Kinase AK3.
Biochemistry, 59, 2020
7RK8
DownloadVisualize
BU of 7rk8 by Molmil
Cryo-EM Structure of Adeno-Associated Virus Serotype 9 with Engineered Peptide Domain PHP.B (AAV9-PHP.B)
分子名称: Capsid protein VP1
著者Fluck, E.C, Pumroy, R.A, Moiseenkova-Bell, V.Y.
登録日2021-07-22
公開日2021-08-04
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.27 Å)
主引用文献Context-Specific Function of the Engineered Peptide Domain of PHP.B.
J.Virol., 95, 2021
3HE5
DownloadVisualize
BU of 3he5 by Molmil
Heterospecific coiled-coil pair SYNZIP2:SYNZIP1
分子名称: SYNZIP1, SYNZIP2
著者Reinke, A.W, Grant, R.A, Keating, A.E.
登録日2009-05-07
公開日2010-03-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A synthetic coiled-coil interactome provides heterospecific modules for molecular engineering.
J.Am.Chem.Soc., 132, 2010
2Y4U
DownloadVisualize
BU of 2y4u by Molmil
Crystal structure of human P58(IPK) in space group P312
分子名称: DNAJ HOMOLOG SUBFAMILY C MEMBER 3
著者Svard, M, Biterova, E.I, Bourhis, J.-M, Guy, J.E.
登録日2011-01-10
公開日2011-08-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The Crystal Structure of the Human Co-Chaperone P58Ipk
Plos One, 6, 2011
1MPS
DownloadVisualize
BU of 1mps by Molmil
PHOTOSYNTHETIC REACTION CENTER MUTANT WITH PHE M 197 REPLACED WITH ARG AND TYR M 177 REPLACED WITH PHE (CHAIN M, Y177F, F197R)
分子名称: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, FE (II) ION, ...
著者Mcauley-Hecht, K.E, Fyfe, P.K, Ridge, J.P, Prince, S, Hunter, C.N, Isaacs, N.W, Cogdell, R.J, Jones, M.R.
登録日1998-03-09
公開日1998-10-14
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural studies of wild-type and mutant reaction centers from an antenna-deficient strain of Rhodobacter sphaeroides: monitoring the optical properties of the complex from bacterial cell to crystal.
Biochemistry, 37, 1998
7RK9
DownloadVisualize
BU of 7rk9 by Molmil
Cryo-EM Structure of Adeno-Associated Virus Serotype 1 with Engineered Peptide Domain PHP.B (AAV1-PHP.B)
分子名称: Capsid protein
著者Fluck, E.C, Pumroy, R.A, Moiseenkova-Bell, V.Y.
登録日2021-07-22
公開日2021-08-04
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.32 Å)
主引用文献Context-Specific Function of the Engineered Peptide Domain of PHP.B.
J.Virol., 95, 2021
6YU8
DownloadVisualize
BU of 6yu8 by Molmil
RNA Methyltransferase of Sudan Ebola Virus
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Ferron, F, Valle, C, Zamboni, V, Canard, B, Decroly, E.
登録日2020-04-25
公開日2021-02-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.841 Å)
主引用文献First insights into the structural features of Ebola virus methyltransferase activities.
Nucleic Acids Res., 49, 2021
6YTU
DownloadVisualize
BU of 6ytu by Molmil
Atomic-resolution structure of the coiled-coil dimerisation domain of human Arc
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Activity-regulated cytoskeleton-associated protein, CHLORIDE ION
著者Hallin, E.I, Touma, C, Bramham, C.R, Kursula, P.
登録日2020-04-24
公開日2021-03-03
最終更新日2021-05-12
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Arc self-association and formation of virus-like capsids are mediated by an N-terminal helical coil motif.
Febs J., 288, 2021

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon