Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9BDX
DownloadVisualize
BU of 9bdx by Molmil
NF-kappaB RelA homo-dimer bound to CG-centric kappaB DNA
分子名称: DNA (5'-D(*AP*TP*CP*AP*CP*TP*GP*GP*AP*AP*GP*TP*TP*CP*CP*CP*AP*GP*T)-3'), DNA (5'-D(P*AP*CP*TP*GP*GP*GP*AP*AP*CP*TP*TP*CP*CP*AP*GP*TP*GP*AP*T)-3'), Transcription factor p65
著者Biswas, T, Shahabi, S, Tsodikov, O.V, Ghosh, G.
登録日2024-04-12
公開日2024-04-24
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Transient interactions modulate the affinity of NF-kappa B transcription factors for DNA.
Proc.Natl.Acad.Sci.USA, 121, 2024
5K9A
DownloadVisualize
BU of 5k9a by Molmil
Sortase A from Corynebacterium diphtheriae
分子名称: Putative fimbrial associated sortase-like protein, SULFATE ION
著者Osipiuk, J, Huang, I.-H, Ma, X, Ton-That, H, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-05-31
公開日2016-06-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献In vitro reconstitution of sortase-catalyzed pilus polymerization reveals structural elements involved in pilin cross-linking.
Proc.Natl.Acad.Sci.USA, 115, 2018
2VDQ
DownloadVisualize
BU of 2vdq by Molmil
Integrin AlphaIIbBeta3 Headpiece Bound to a Chimeric Fibrinogen Gamma chain peptide, HHLGGAKQRGDV
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, FIBRINOGEN, ...
著者Springer, T.A, Zhu, J, Xiao, T.
登録日2007-10-10
公開日2008-09-02
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Structural Basis for Distinctive Recognition of Fibrinogen Gammac Peptide by the Platelet Integrin Alphaiibbeta3.
J.Cell Biol., 182, 2008
9BNA
DownloadVisualize
BU of 9bna by Molmil
RE-REFINEMENT OF THE B-DODECAMER D(CGCGAATTCGCG) WITH A COMPARATIVE ANALYSIS OF THE SOLVENT IN IT AND IN THE Z-HEXAMER D(5BRCG5BRCG5BRCG)
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
著者Westhof, E.
登録日1990-02-01
公開日1991-04-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Re-refinement of the B-dodecamer d(CGCGAATTCGCG) with a comparative analysis of the solvent in it and in the Z-hexamer d(5BrCG5BrCG5BrCG).
J.Biomol.Struct.Dyn., 5, 1987
2I61
DownloadVisualize
BU of 2i61 by Molmil
Depressant anti-insect neurotoxin, LqhIT2 from Leiurus quinquestriatus hebraeus
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, CARBON DIOXIDE, ...
著者Frolow, F, Gurevitz, M, Karbat, I, Turkov, M, Gordon, D.
登録日2006-08-27
公開日2006-12-26
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献X-ray Structure and Mutagenesis of the Scorpion Depressant Toxin LqhIT2 Reveals Key Determinants Crucial for Activity and Anti-Insect Selectivity.
J.Mol.Biol., 366, 2007
5K9D
DownloadVisualize
BU of 5k9d by Molmil
Crystal structure of human dihydroorotate dehydrogenase at 1.7 A resolution
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, ACETATE ION, CHLORIDE ION, ...
著者Lewis, T.A, Sykes, D.B, Law, J.M, Munoz, B, Scadden, D.T, Rustiguel, J.K, Nonato, M.C, Schreiber, S.L.
登録日2016-05-31
公開日2016-10-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Development of ML390: A Human DHODH Inhibitor That Induces Differentiation in Acute Myeloid Leukemia.
ACS Med Chem Lett, 7, 2016
9B22
DownloadVisualize
BU of 9b22 by Molmil
Crystal structure of ADP-ribose diphosphatase from Klebsiella pneumoniae (ADP Ribose and AMP bound)
分子名称: ADENOSINE MONOPHOSPHATE, ADP-ribose pyrophosphatase, MAGNESIUM ION, ...
著者Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2024-03-14
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of ADP-ribose diphosphatase from Klebsiella pneumoniae (ADP Ribose and AMP bound)
To be published
5JX5
DownloadVisualize
BU of 5jx5 by Molmil
GH6 Orpinomyces sp. Y102 enzyme
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, ACETATE ION, ...
著者Tsai, L.C, Huang, H.C.
登録日2016-05-12
公開日2017-05-17
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of GH6 Orpinomyces sp. Y102 CelC7 enzyme with exo- and endo- activity in a complex with cellobiose
Acta Crystallogr.,Sect.D, 2019
2I4C
DownloadVisualize
BU of 2i4c by Molmil
Crystal structure of Bicarbonate Transport Protein CmpA from Synechocystis sp. PCC 6803 in complex with bicarbonate and calcium
分子名称: BICARBONATE ION, Bicarbonate transporter, CALCIUM ION
著者Koropatkin, N.M, Smith, T.J, Pakrasi, H.B.
登録日2006-08-21
公開日2006-12-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Structure of a Cyanobacterial Bicarbonate Transport Protein, CmpA.
J.Biol.Chem., 282, 2007
2V5L
DownloadVisualize
BU of 2v5l by Molmil
Structures of the Open and Closed State of Trypanosomal Triosephosphate Isomerase: as Observed in a New Crystal Form: Implications for the Reaction Mechanism
分子名称: SULFATE ION, TRIOSEPHOSPHATE ISOMERASE
著者Noble, M.E.M, Zeelen, J.P, Wierenga, R.K.
登録日2007-07-06
公開日2007-07-31
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of the Open and Closed State of Trypanosomal Triosephosphate Isomerase: As Observed in a New Crystal Form: Implications for the Reaction Mechanism
Proteins: Struct.,Funct., Genet., 16, 1993
9B21
DownloadVisualize
BU of 9b21 by Molmil
Crystal structure of ADP-ribose diphosphatase from Klebsiella pneumoniae (ADP Ribose bound, Orthorhombic P form)
分子名称: ADP-ribose pyrophosphatase, MAGNESIUM ION, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
著者Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2024-03-14
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of ADP-ribose diphosphatase from Klebsiella pneumoniae (ADP Ribose bound, Orthorhombic P form)
To be published
5JZA
DownloadVisualize
BU of 5jza by Molmil
Aspartyl/Asparaginyl beta-hydroxylase (AspH)oxygenase and TPR domains in complex with manganese and N-oxalylglycine
分子名称: Aspartyl/asparaginyl beta-hydroxylase, GLYCEROL, MANGANESE (II) ION, ...
著者McDonough, M.A, Pfeffer, I.
登録日2016-05-16
公開日2017-05-24
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Aspartate/asparagine-beta-hydroxylase crystal structures reveal an unexpected epidermal growth factor-like domain substrate disulfide pattern.
Nat Commun, 10, 2019
2VGI
DownloadVisualize
BU of 2vgi by Molmil
HUMAN ERYTHROCYTE PYRUVATE KINASE: R486W MUTANT
分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, 2-PHOSPHOGLYCOLIC ACID, MANGANESE (II) ION, ...
著者Valentini, G, Chiarelli, L, Fortin, R, Dolzan, M, Galizzi, A, Abraham, D.J, Wang, C, Bianchi, P, Zanella, A, Mattevi, A.
登録日2007-11-13
公開日2007-11-20
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献Structure and Function of Human Erythrocyte Pyruvate Kinase. Molecular Basis of Nonspherocytic Hemolytic Anemia.
J.Biol.Chem., 277, 2002
2I69
DownloadVisualize
BU of 2i69 by Molmil
Crystal structure of the West Nile virus envelope glycoprotein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Polyprotein
著者Kanai, R, Modis, Y.
登録日2006-08-28
公開日2006-11-21
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (3.11 Å)
主引用文献Crystal structure of west nile virus envelope glycoprotein reveals viral surface epitopes.
J.Virol., 80, 2006
9B8D
DownloadVisualize
BU of 9b8d by Molmil
Structure of Legionella pneumophila Ceg10
分子名称: 1,2-ETHANEDIOL, Ceg10, PHOSPHATE ION
著者Tomchick, D.R, Heisler, D.B, Alto, N.M.
登録日2024-03-29
公開日2024-04-10
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Exploiting bacterial effector proteins to uncover evolutionarily conserved antiviral host machinery.
Plos Pathog., 20, 2024
9B8E
DownloadVisualize
BU of 9b8e by Molmil
Structure of S-nitrosylated Legionella pneumophila Ceg10.
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
著者Tomchick, D.R, Heisler, D.B, Alto, N.M.
登録日2024-03-29
公開日2024-04-10
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Exploiting bacterial effector proteins to uncover evolutionarily conserved antiviral host machinery.
Plos Pathog., 20, 2024
5KA8
DownloadVisualize
BU of 5ka8 by Molmil
Protein Tyrosine Phosphatase 1B L192A mutant, open state
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, Tyrosine-protein phosphatase non-receptor type 1
著者Choy, M.S, Peti, W, Page, R.
登録日2016-06-01
公開日2017-03-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.971 Å)
主引用文献Conformational Rigidity and Protein Dynamics at Distinct Timescales Regulate PTP1B Activity and Allostery.
Mol. Cell, 65, 2017
9B1Z
DownloadVisualize
BU of 9b1z by Molmil
Crystal structure of ADP-ribose diphosphatase from Klebsiella pneumoniae (Apo)
分子名称: ADP-ribose pyrophosphatase, SODIUM ION
著者Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2024-03-14
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystal structure of ADP-ribose diphosphatase from Klebsiella pneumoniae (Apo)
To be published
5JZJ
DownloadVisualize
BU of 5jzj by Molmil
Crystal structure of DCLK1-KD in complex with AMPPN
分子名称: AMP PHOSPHORAMIDATE, MAGNESIUM ION, SULFATE ION, ...
著者Patel, O, Lucet, I.
登録日2016-05-17
公開日2016-08-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Biochemical and Structural Insights into Doublecortin-like Kinase Domain 1.
Structure, 24, 2016
9B20
DownloadVisualize
BU of 9b20 by Molmil
Crystal structure of ADP-ribose diphosphatase from Klebsiella pneumoniae (AMP bound)
分子名称: ADENOSINE MONOPHOSPHATE, ADP-ribose pyrophosphatase, MAGNESIUM ION
著者Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2024-03-14
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of ADP-ribose diphosphatase from Klebsiella pneumoniae (AMP bound)
To be published
2I54
DownloadVisualize
BU of 2i54 by Molmil
Phosphomannomutase from Leishmania mexicana
分子名称: CHLORIDE ION, CITRIC ACID, MAGNESIUM ION, ...
著者Smith, B.J.
登録日2006-08-24
公開日2007-04-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of Leishmania mexicana phosphomannomutase highlights similarities with human isoforms
J.Mol.Biol., 363, 2006
6LKD
DownloadVisualize
BU of 6lkd by Molmil
in meso full-length rat KMO in complex with a pyrazoyl benzoic acid inhibitor
分子名称: 5-[5-(4-chloranyl-3-fluoranyl-phenyl)-4-methyl-pyrazol-1-yl]-2-phenylmethoxy-benzoic acid, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Mimasu, S, Yamagishi, H, Kiyohara, M, Kakefuda, K, Okuda, T.
登録日2019-12-19
公開日2020-12-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Full-length in meso structure and mechanism of rat kynurenine 3-monooxygenase inhibition.
Commun Biol, 4, 2021
5JZU
DownloadVisualize
BU of 5jzu by Molmil
Aspartyl/Asparaginyl beta-hydroxylase (AspH)oxygenase and TPR domains in complex with manganese, N-oxalylglycine and factor X substrate peptide fragment (26mer)
分子名称: Aspartyl/asparaginyl beta-hydroxylase, Coagulation factor X, MANGANESE (II) ION, ...
著者McDonough, M.A, Pfeffer, I.
登録日2016-05-17
公開日2017-06-07
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Aspartate/asparagine-beta-hydroxylase crystal structures reveal an unexpected epidermal growth factor-like domain substrate disulfide pattern.
Nat Commun, 10, 2019
5KBN
DownloadVisualize
BU of 5kbn by Molmil
The crystal structure of fluoride channel Fluc Ec2 F80I Mutant
分子名称: DECYL-BETA-D-MALTOPYRANOSIDE, FLUORIDE ION, Putative fluoride ion transporter CrcB, ...
著者Last, N.B, Kolmakova-Partensky, L, Shane, T, Miller, C.
登録日2016-06-03
公開日2016-08-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Mechanistic signs of double-barreled structure in a fluoride ion channel.
Elife, 5, 2016
2I5X
DownloadVisualize
BU of 2i5x by Molmil
Engineering the PTPbeta catalytic domain with improved crystallization properties
分子名称: (4-ETHYLPHENYL)SULFAMIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
著者Evdokimov, A.G, Pokross, M.E, Walter, R.L, Mekel, M, Klopfenstein, S.
登録日2006-08-26
公開日2006-09-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Engineering the catalytic domain of human protein tyrosine phosphatase beta for structure-based drug discovery.
Acta Crystallogr.,Sect.D, 62, 2006

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon