Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6GHL
DownloadVisualize
BU of 6ghl by Molmil
cyanobacterial GAPDH with full-length CP12
分子名称: CP12 polypeptide, Glyceraldehyde-3-phosphate dehydrogenase, MALONATE ION, ...
著者McFarlane, C.R, Murray, J.W.
登録日2018-05-08
公開日2019-05-08
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.378 Å)
主引用文献Structural basis of light-induced redox regulation in the Calvin-Benson cycle in cyanobacteria.
Proc.Natl.Acad.Sci.USA, 116, 2019
6K41
DownloadVisualize
BU of 6k41 by Molmil
cryo-EM structure of alpha2BAR-GoA complex
分子名称: 4-[(1~{S})-1-(2,3-dimethylphenyl)ethyl]-1~{H}-imidazole, Alpha-2A adrenergic receptor,Endolysin,Alpha-2B adrenergic receptor,Alpha-2B adrenergic receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Yuan, D, Liu, Z, Wang, H.W, Kobilka, B.K.
登録日2019-05-23
公開日2020-04-15
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Activation of the alpha2Badrenoceptor by the sedative sympatholytic dexmedetomidine.
Nat.Chem.Biol., 16, 2020
4XR8
DownloadVisualize
BU of 4xr8 by Molmil
Crystal structure of the HPV16 E6/E6AP/p53 ternary complex at 2.25 A resolution
分子名称: 1,2-ETHANEDIOL, Cellular tumor antigen p53, DI(HYDROXYETHYL)ETHER, ...
著者Martinez-Zapien, D, Ruiz, F.X, Mitschler, A, Podjarny, A, Trave, G, Zanier, K.
登録日2015-01-20
公開日2016-02-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure of the E6/E6AP/p53 complex required for HPV-mediated degradation of p53.
Nature, 529, 2016
8RHS
DownloadVisualize
BU of 8rhs by Molmil
Structure of the ZnF domain from human Roquin-1
分子名称: Roquin-1
著者Schlundt, A, Tants, J.N.
登録日2023-12-16
公開日2024-07-03
最終更新日2024-09-18
実験手法SOLUTION NMR
主引用文献Structure and RNA-binding of the helically extended Roquin CCCH-type zinc finger.
Nucleic Acids Res., 52, 2024
3LWA
DownloadVisualize
BU of 3lwa by Molmil
The Crystal Structure of a Secreted Thiol-disulfide Isomerase from Corynebacterium glutamicum to 1.75A
分子名称: CALCIUM ION, Secreted thiol-disulfide isomerase
著者Stein, A.J, Weger, A, Hendricks, R, Cobb, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2010-02-23
公開日2010-03-02
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The Crystal Structure of a Secreted Thiol-disulfide Isomerase from Corynebacterium glutamicum to 1.75A
To be Published
6SOD
DownloadVisualize
BU of 6sod by Molmil
Fragment N14056a in complex with MAP kinase p38-alpha
分子名称: 1-[[(3~{S})-1,4-dioxaspiro[4.5]decan-3-yl]methyl]piperidine, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者Nichols, C.E, De Nicola, G.F.
登録日2019-08-29
公開日2019-10-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Mining the PDB for Tractable Cases Where X-ray Crystallography Combined with Fragment Screens Can Be Used to Systematically Design Protein-Protein Inhibitors: Two Test Cases Illustrated by IL1 beta-IL1R and p38 alpha-TAB1 Complexes.
J.Med.Chem., 63, 2020
3LWS
DownloadVisualize
BU of 3lws by Molmil
Crystal structure of Putative aromatic amino acid beta-eliminating lyase/threonine aldolase. (YP_001813866.1) from Exiguobacterium sp. 255-15 at 2.00 A resolution
分子名称: Aromatic amino acid beta-eliminating lyase/threonine aldolase
著者Joint Center for Structural Genomics (JCSG)
登録日2010-02-24
公開日2010-03-31
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of Putative aromatic amino acid beta-eliminating lyase/threonine aldolase. (YP_001813866.1) from Exiguobacterium sp. 255-15 at 2.00 A resolution
To be published
7AHF
DownloadVisualize
BU of 7ahf by Molmil
Dimeric structure of the catalytic domain of the human ubiquitin-conjugating enzyme UBE2S L114E varaiant
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Ubiquitin-conjugating enzyme E2 S
著者Liess, A.K.L, Feiler, C.G, Lorenz, S.
登録日2020-09-24
公開日2021-10-06
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural analyses of the ubiquitin-conjugating enzyme UBE2S in different crystal forms
To Be Published
9FVK
DownloadVisualize
BU of 9fvk by Molmil
Crystal structure of amyloidogenic light chain AL-55 in open conformation.
分子名称: 1,2-ETHANEDIOL, AL55, DI(HYDROXYETHYL)ETHER, ...
著者Polsinelli, I, Puri, S, Broggini, L, Gadda, A, Petralia, U, Ricagno, S.
登録日2024-06-27
公開日2025-07-09
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献To be published
To Be Published
9FWH
DownloadVisualize
BU of 9fwh by Molmil
Crystal Structure of SARS-CoV-2 NSP10-ExoN in complex with VT00019
分子名称: (4R)-4-phenyl-1,2-thiazolidine 1,1-dioxide, Guanine-N7 methyltransferase nsp14, Non-structural protein 10, ...
著者Krojer, T, Kozielski, F, Sele, C, Nyblom, M, Fisher, S.Z, Knecht, W.
登録日2024-06-30
公開日2025-07-09
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal Structure of SARS-CoV-2 NSP10-ExoN in complex with VT00019
To Be Published
7AHR
DownloadVisualize
BU of 7ahr by Molmil
Enzyme of biosynthetic pathway
分子名称: 3-[(1-Carboxyvinyl)oxy]benzoic acid, Chorismate dehydratase, GLYCEROL
著者Archna, A, Breithaupt, C, Stubbs, M.T.
登録日2020-09-25
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Mechanism of chorismate dehydratase MqnA, the first enzyme of the futalosine pathway, proceeds via substrate-assisted catalysis
J.Biol.Chem., 2022
7XCZ
DownloadVisualize
BU of 7xcz by Molmil
Cryo-EM structure of SARS-CoV-2 Delta RBD in complex with BA7054 and BA7125 fab (local refinement)
分子名称: BA7054 fab, BA7125 fab, Spike glycoprotein
著者Liu, Z, Liu, S.
登録日2022-03-26
公開日2023-03-01
最終更新日2025-06-18
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Biparatopic antibody BA7208/7125 effectively neutralizes SARS-CoV-2 variants including Omicron BA.1-BA.5.
Cell Discov, 9, 2023
6GI6
DownloadVisualize
BU of 6gi6 by Molmil
Crystal structure of the ACVR1 (ALK2) kinase in complex with a Quinazolinone based ALK2 inhibitor with a 5-methyl core.
分子名称: 1,2-ETHANEDIOL, 5-methyl-6-quinolin-5-yl-3~{H}-quinazolin-4-one, Activin receptor type-1, ...
著者Williams, E, Hudson, L, Bezerra, G.A, Sorrell, F, Mahajan, P, Kupinska, K, Hoelder, S, Burgess-Brown, N, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.N.
登録日2018-05-10
公開日2018-05-23
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Novel Quinazolinone Inhibitors of ALK2 Flip between Alternate Binding Modes: Structure-Activity Relationship, Structural Characterization, Kinase Profiling, and Cellular Proof of Concept.
J. Med. Chem., 61, 2018
6Q4V
DownloadVisualize
BU of 6q4v by Molmil
KlenTaq DNA polymerase in complex with dATP
分子名称: 1,2-ETHANEDIOL, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*AP*AP*CP*TP*GP*TP*GP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), ...
著者Kropp, H.M, Diederichs, K, Marx, A.
登録日2018-12-06
公開日2019-02-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.006 Å)
主引用文献The Structure of an Archaeal B-Family DNA Polymerase in Complex with a Chemically Modified Nucleotide.
Angew.Chem.Int.Ed.Engl., 58, 2019
5EQZ
DownloadVisualize
BU of 5eqz by Molmil
Crystal structure of a Rev protein from Borrelia burgdorferi at 1.80 A resolution
分子名称: Rev protein
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2015-11-13
公開日2015-12-09
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of a Rev protein from Borrelia burgdorferi at 1.80 A resolution
to be published
7DFZ
DownloadVisualize
BU of 7dfz by Molmil
Cryo_EM structure of delta N-NPC1L1-EZE
分子名称: (3~{R},4~{S})-1-(4-fluorophenyl)-3-[(3~{S})-3-(4-fluorophenyl)-3-oxidanyl-propyl]-4-(4-hydroxyphenyl)azetidin-2-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Hu, M, Sun, S.
登録日2020-11-10
公開日2021-08-11
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (3.58 Å)
主引用文献Structural insights into the mechanism of human NPC1L1-mediated cholesterol uptake.
Sci Adv, 7, 2021
7C23
DownloadVisualize
BU of 7c23 by Molmil
Crystal structure of CrmE10, a SGNH-hydrolase family esterase
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Li, Z, Li, J.
登録日2020-05-07
公開日2020-05-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-guided protein engineering increases enzymatic activities of the SGNH family esterases.
Biotechnol Biofuels, 13, 2020
6GJO
DownloadVisualize
BU of 6gjo by Molmil
Crystal Structure of Glycogen Synthase Kinase-3 beta in Complex with BI-91BS
分子名称: (3~{Z})-5-ethanoyl-3-[[(1-methylpiperidin-4-yl)amino]-phenyl-methylidene]-1~{H}-indol-2-one, Glycogen synthase kinase-3 beta
著者Hoerer, S.
登録日2018-05-16
公開日2019-03-27
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献CRYSTAL STRUCTURE OF Glycogen synthase kinase-3 beta IN COMPLEX WITH BI-91BS
To Be Published
6SYS
DownloadVisualize
BU of 6sys by Molmil
Crystal structure of (3aR,4S,9bS)-4-(4-hydroxyphenyl)-3a,4,5,9b-tetrahydro-3H-cyclopenta[c]quinoline-8-sulfonamide with carbonic anhydrase 2
分子名称: (4~{S})-4-(4-hydroxyphenyl)-2,3,4,5-tetrahydro-1~{H}-cyclopenta[c]quinoline-8-sulfonamide, GLYCEROL, ZINC ION, ...
著者Angeli, A, Ferraroni, M.
登録日2019-10-01
公開日2020-10-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of (3aR,4S,9bS)-4-(4-hydroxyphenyl)-3a,4,5,9b-tetrahydro-3H-cyclopenta[c]quinoline-8-sulfonamide with carbonic anhydrase 2
To Be Published
7XDA
DownloadVisualize
BU of 7xda by Molmil
Cryo-EM structure of SARS-CoV-2 Delta RBD in complex with BA7208 and BA7125 fab (local refinement)
分子名称: BA7125 fab, BA7208 fab, Spike glycoprotein
著者Liu, Z, Liu, S, Liu, S.
登録日2022-03-26
公開日2023-03-01
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献Biparatopic antibody BA7208/7125 effectively neutralizes SARS-CoV-2 variants including Omicron BA.1-BA.5.
Cell Discov, 9, 2023
6A2W
DownloadVisualize
BU of 6a2w by Molmil
Crystal structure of fucoxanthin chlorophyll a/c complex from Phaeodactylum tricornutum
分子名称: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者Wang, W, Yu, L.J, Kuang, T.Y, Shen, J.R.
登録日2018-06-13
公開日2019-02-06
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for blue-green light harvesting and energy dissipation in diatoms.
Science, 363, 2019
7X4X
DownloadVisualize
BU of 7x4x by Molmil
BTB domain of KEAP1 in complex with MEF
分子名称: 4-ethoxy-4-oxobutanoic acid, Kelch-like ECH-associated protein 1
著者Qu, L.Z.
登録日2022-03-03
公開日2023-03-08
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Characterization of the modification of Kelch-like ECH-associated protein 1 by different fumarates.
Biochem.Biophys.Res.Commun., 605, 2022
5EU5
DownloadVisualize
BU of 5eu5 by Molmil
HLA Class I antigen
分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
著者Rizkallah, P.J, Bianchi, V, Cole, D.K, Sewell, A.K.
登録日2015-11-18
公開日2016-03-02
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献A Molecular Switch Abrogates Glycoprotein 100 (gp100) T-cell Receptor (TCR) Targeting of a Human Melanoma Antigen.
J.Biol.Chem., 291, 2016
1ZI5
DownloadVisualize
BU of 1zi5 by Molmil
Crystal Structure of Human N-acetylgalactosaminyltransferase (GTA) Complexed with H type I Trisaccharide
分子名称: Histo-blood group ABO system transferase (NAGAT) Includes: Glycoprotein-fucosylgalactoside alpha-N- acetylgalactosaminyltransferase, MERCURY (II) ION, URIDINE-5'-DIPHOSPHATE, ...
著者Letts, J.A, Rose, N.L, Fang, Y.R, Barry, C.H, Borisova, S.N, Seto, N.O, Palcic, M.M, Evans, S.V.
登録日2005-04-26
公開日2005-12-13
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Differential Recognition of the Type I and II H Antigen Acceptors by the Human ABO(H) Blood Group A and B Glycosyltransferases.
J.Biol.Chem., 281, 2006
6D56
DownloadVisualize
BU of 6d56 by Molmil
Ras:SOS:Ras in complex with a small molecule activator
分子名称: 6-chloro-2-(2,6-diazaspiro[3.3]heptan-2-yl)-4-(3,5-dimethyl-1H-pyrazol-4-yl)-1-[(4-fluoro-3,5-dimethylphenyl)methyl]-1H-benzimidazole, FORMIC ACID, GLYCEROL, ...
著者Phan, J, Hodges, T, Fesik, S.W.
登録日2018-04-19
公開日2018-09-19
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Discovery and Structure-Based Optimization of Benzimidazole-Derived Activators of SOS1-Mediated Nucleotide Exchange on RAS.
J. Med. Chem., 61, 2018

245011

件を2025-11-19に公開中

PDB statisticsPDBj update infoContact PDBjnumon