PDB: 5591 件ウェブページステータス検索Chemie searchBIRD

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5KX1	NMR Solution Structure of Designed Peptide NC_cHHH_D1 分子名称: Designed peptide NC_cHHH_D1 著者 Harvey, P.J, Craik, D.J. 登録日 2016-07-19 公開日 2016-09-21 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Accurate de novo design of hyperstable constrained peptides. Nature, 538, 2016
5KVN	NMR Solution Structure of Designed Peptide NC_HEE_D1 分子名称: Designed peptide NC_HEE_D1 著者 Harvey, P.J, Craik, D.J. 登録日 2016-07-14 公開日 2016-09-21 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Accurate de novo design of hyperstable constrained peptides. Nature, 538, 2016
5LFN	Crystal structure of human chondroadherin 分子名称: CHLORIDE ION, Chondroadherin 著者 Ramisch, S, Pramhed, A, Logan, D.T. 登録日 2016-07-03 公開日 2016-12-28 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure of human chondroadherin: solving a difficult molecular-replacement problem using de novo models. Acta Crystallogr D Struct Biol, 73, 2017
8DQG	Crystal structure of pyrrolysyl-tRNA synthetase from Methanomethylophilus alvus engineered for acridone amino acid (RS1) bound to AMPPNP and acridone 分子名称: (2~{S})-2-azanyl-3-(9-oxidanylidene-10~{H}-acridin-2-yl)propanoic acid, AA_TRNA_LIGASE_II domain-containing protein, DI(HYDROXYETHYL)ETHER, ... 著者 Gottfried-Lee, I, Karplus, P.A, Mehl, R.A, Cooley, R.B. 登録日 2022-07-19 公開日 2022-12-07 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 Structures of Methanomethylophilus alvus Pyrrolysine tRNA-Synthetases Support the Need for De Novo Selections When Altering the Substrate Specificity. Acs Chem.Biol., 17, 2022
8DQI	Crystal structure of pyrrolysyl-tRNA synthetase from Methanomethylophilus alvus engineered for acridone amino acid (RS1) bound to ATP and acridone after 2- weeks of crystal growth 分子名称: (2~{S})-2-azanyl-3-(9-oxidanylidene-10~{H}-acridin-2-yl)propanoic acid, AA_TRNA_LIGASE_II domain-containing protein, ADENOSINE-5'-TRIPHOSPHATE, ... 著者 Gottfried-Lee, I, Karplus, P.A, Mehl, R.A, Cooley, R.B. 登録日 2022-07-19 公開日 2022-12-07 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 Structures of Methanomethylophilus alvus Pyrrolysine tRNA-Synthetases Support the Need for De Novo Selections When Altering the Substrate Specificity. Acs Chem.Biol., 17, 2022
8DQH	Crystal structure of pyrrolysyl-tRNA synthetase from Methanomethylophilus alvus engineered for acridone amino acid (RS1) bound to ATP and acridone after 24 hours of crystal growth 分子名称: (2~{S})-2-azanyl-3-(9-oxidanylidene-10~{H}-acridin-2-yl)propanoic acid, AA_TRNA_LIGASE_II domain-containing protein, ADENOSINE-5'-TRIPHOSPHATE, ... 著者 Gottfried-Lee, I, Karplus, P.A, Mehl, R.A, Cooley, R.B. 登録日 2022-07-19 公開日 2022-12-07 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.52 Å) 主引用文献 Structures of Methanomethylophilus alvus Pyrrolysine tRNA-Synthetases Support the Need for De Novo Selections When Altering the Substrate Specificity. Acs Chem.Biol., 17, 2022
8DQJ	Crystal structure of pyrrolysyl-tRNA synthetase from Methanomethylophilus alvus engineered for acridone amino acid (AST) bound to ATP and acridone 分子名称: (2~{S})-2-azanyl-3-(9-oxidanylidene-10~{H}-acridin-2-yl)propanoic acid, AA_TRNA_LIGASE_II domain-containing protein, ADENOSINE MONOPHOSPHATE, ... 著者 Gottfried-Lee, I, Karplus, P.A, Mehl, R.A, Cooley, R.B. 登録日 2022-07-19 公開日 2022-12-07 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 Structures of Methanomethylophilus alvus Pyrrolysine tRNA-Synthetases Support the Need for De Novo Selections When Altering the Substrate Specificity. Acs Chem.Biol., 17, 2022
6WRW	Crystal structure of computationally designed protein 2DS25.5 in complex with the human Transferrin receptor ectodomain 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Computationally designed protein 2DS25.5, ... 著者 Abraham, J, Coscia, A, Olal, D, Sahtoe, D.D, Baker, D, Clark, L. 登録日 2020-04-30 公開日 2021-04-28 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.84 Å) 主引用文献 Transferrin receptor targeting by de novo sheet extension. Proc.Natl.Acad.Sci.USA, 118, 2021
1S49	Crystal Structure of RNA-dependent RNA polymerase construct 1 (residues 71-679) from bovine viral diarrhea virus complexed with GTP 分子名称: GUANOSINE-5'-TRIPHOSPHATE, RNA-dependent RNA polymerase 著者 Choi, K.H, Groarke, J.M, Young, D.C, Kuhn, R.J, Smith, J.L, Pevear, D.C, Rossmann, M.G. 登録日 2004-01-15 公開日 2004-04-06 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation. Proc.Natl.Acad.Sci.Usa, 101, 2004
6Q5N	Crystal structure of a CC-Hex mutant that forms a parallel six-helix coiled coil CC-Hex*-L24Nle 分子名称: 1,4-DIETHYLENE DIOXIDE, CC-Hex*-L24Nle, GLYCEROL 著者 Wood, C.W, Beesley, J.L, Rhys, G.G, Brady, R.L, Woolfson, D.N. 登録日 2018-12-09 公開日 2019-05-22 最終更新日 2019-06-19 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Navigating the Structural Landscape of De Novo alpha-Helical Bundles. J.Am.Chem.Soc., 141, 2019
6Q5R	Crystal structure of a CC-Hex mutant that forms an antiparallel four-helix coiled coil CC-Hex*-LL-KgEb 分子名称: CC-Hex*-LL-KgEb, GLYCEROL 著者 Beesley, J.L, Rhys, G.G, Wood, C.W, Brady, R.L, Woolfson, D.N. 登録日 2018-12-09 公開日 2019-05-22 最終更新日 2019-06-19 実験手法 X-RAY DIFFRACTION (1.61 Å) 主引用文献 Navigating the Structural Landscape of De Novo alpha-Helical Bundles. J.Am.Chem.Soc., 141, 2019
6Q5H	Crystal structure of a CC-Hex mutant that forms an antiparallel four-helix coiled coil CC-Hex*-L24D 分子名称: AMMONIUM ION, CC-Hex*-L24D, SULFATE ION 著者 Wood, C.W, Beesley, J.L, Rhys, G.G, Brady, R.L, Woolfson, D.N. 登録日 2018-12-09 公開日 2019-05-22 最終更新日 2019-06-19 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Navigating the Structural Landscape of De Novo alpha-Helical Bundles. J.Am.Chem.Soc., 141, 2019
6Q5K	Crystal structure of a CC-Hex mutant that forms an antiparallel four-helix coiled coil CC-Hex*-L24K 分子名称: AMMONIUM ION, CC-Hex*-L24K, GLYCEROL, ... 著者 Wood, C.W, Beesley, J.L, Rhys, G.G, Brady, R.L, Woolfson, D.N. 登録日 2018-12-09 公開日 2019-05-22 最終更新日 2019-06-19 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Navigating the Structural Landscape of De Novo alpha-Helical Bundles. J.Am.Chem.Soc., 141, 2019
6Q5Q	Crystal structure of a CC-Hex mutant that forms an antiparallel four-helix coiled coil CC-Hex-KgEb 分子名称: CC-Hex-KgEb, L(+)-TARTARIC ACID 著者 Zaccai, N.R, Rhys, G.G, Wood, C.W, Beesley, J.L, Brady, R.L, Woolfson, D.N. 登録日 2018-12-09 公開日 2019-05-22 最終更新日 2019-06-19 実験手法 X-RAY DIFFRACTION (1.08 Å) 主引用文献 Navigating the Structural Landscape of De Novo alpha-Helical Bundles. J.Am.Chem.Soc., 141, 2019
6Q5J	Crystal structure of a CC-Hex mutant that forms a parallel six-helix coiled coil CC-Hex*-L24E 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CC-Hex*-L24E 著者 Rhys, G.G, Wood, C.W, Beesley, J.L, Brady, R.L, Woolfson, D.N. 登録日 2018-12-09 公開日 2019-05-22 最終更新日 2019-06-19 実験手法 X-RAY DIFFRACTION (1.69 Å) 主引用文献 Navigating the Structural Landscape of De Novo alpha-Helical Bundles. J.Am.Chem.Soc., 141, 2019
6Q5M	Crystal structure of a CC-Hex mutant that forms an antiparallel four-helix coiled coil CC-Hex*-L24Dab 分子名称: CC-Hex*-L24Dab, SODIUM ION 著者 Wood, C.W, Beesley, J.L, Rhys, G.G, Brady, R.L, Woolfson, D.N. 登録日 2018-12-09 公開日 2019-05-22 最終更新日 2019-06-19 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Navigating the Structural Landscape of De Novo alpha-Helical Bundles. J.Am.Chem.Soc., 141, 2019
1S48	Crystal structure of RNA-dependent RNA polymerase construct 1 (residues 71-679) from BVDV 分子名称: RNA-dependent RNA polymerase 著者 Choi, K.H, Groarke, J.M, Young, D.C, Kuhn, R.J, Smith, J.L, Pevear, D.C, Rossmann, M.G. 登録日 2004-01-15 公開日 2004-04-06 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation. Proc.Natl.Acad.Sci.Usa, 101, 2004
1S4F	Crystal Structure of RNA-dependent RNA polymerase construct 2 from bovine viral diarrhea virus (BVDV) 分子名称: RNA-dependent RNA polymerase 著者 Choi, K.H, Groarke, J.M, Young, D.C, Kuhn, R.J, Smith, J.L, Pevear, D.C, Rossmann, M.G. 登録日 2004-01-16 公開日 2004-04-06 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation. Proc.Natl.Acad.Sci.Usa, 101, 2004
1S9Z	SYNTHETIC 17 AMINO ACID LONG PEPTIDE THAT FORMS A NATIVE-LIKE COILED-COIL AT AMBIENT TEMPERATURE AND AGGREGATES INTO AMYLOID-LIKE FIBRILS AT HIGHER TEMPERATURES. 分子名称: SODIUM ION, SYNTHETIC COILED-COIL PEPTIDE, ZINC ION 著者 Kammerer, R.A, Kostrewa, D, Zurdo, J, Detken, A, Garcia-Echeverria, C, Green, J.D, Muller, S.A, Meier, B.H, Winkler, F.K, Dobson, C.M, Steinmetz, M.O. 登録日 2004-02-06 公開日 2004-04-06 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Exploring amyloid formation by a de novo design Proc.Natl.Acad.Sci.USA, 101, 2004
6Q5O	Crystal structure of a CC-Hex mutant that forms an antiparallel four-helix coiled coil CC-Hex*-LL 分子名称: CC-Hex*-LL 著者 Rhys, G.G, Wood, C.W, Beesley, J.L, Brady, R.L, Woolfson, D.N. 登録日 2018-12-09 公開日 2019-05-22 最終更新日 2019-06-19 実験手法 X-RAY DIFFRACTION (1 Å) 主引用文献 Navigating the Structural Landscape of De Novo alpha-Helical Bundles. J.Am.Chem.Soc., 141, 2019
6Q5I	Crystal structure of a CC-Hex mutant that forms an antiparallel four-helix coiled coil CC-Hex*-L24E 分子名称: AMMONIUM ION, CC-Hex*-L24E, SULFATE ION 著者 Rhys, G.G, Wood, C.W, Beesley, J.L, Brady, R.L, Woolfson, D.N. 登録日 2018-12-09 公開日 2019-05-22 最終更新日 2019-06-19 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Navigating the Structural Landscape of De Novo alpha-Helical Bundles. J.Am.Chem.Soc., 141, 2019
6Q5L	Crystal structure of a CC-Hex mutant that forms an antiparallel four-helix coiled coil CC-Hex*-L24H 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CC-Hex*-L24H 著者 Rhys, G.G, Wood, C.W, Beesley, J.L, Brady, R.L, Woolfson, D.N. 登録日 2018-12-09 公開日 2019-05-22 最終更新日 2019-06-19 実験手法 X-RAY DIFFRACTION (1.41 Å) 主引用文献 Navigating the Structural Landscape of De Novo alpha-Helical Bundles. J.Am.Chem.Soc., 141, 2019
6Q5P	Crystal structure of a CC-Hex mutant that forms a parallel six-helix coiled coil CC-Hex*-II 分子名称: CC-Hex*-II, GLYCEROL, PHOSPHATE ION 著者 Rhys, G.G, Wood, C.W, Beesley, J.L, Brady, R.L, Woolfson, D.N. 登録日 2018-12-09 公開日 2019-05-22 最終更新日 2019-06-19 実験手法 X-RAY DIFFRACTION (1.44 Å) 主引用文献 Navigating the Structural Landscape of De Novo alpha-Helical Bundles. J.Am.Chem.Soc., 141, 2019
3R4H	Crystal structure of the 4-helix coiled coil CC-Tet-phi22 分子名称: coiled coil helix CC-Tet-phi22 著者 Zaccai, N.R, Chi, B.H.C, Woolfson, D.N, Brady, R.L. 登録日 2011-03-17 公開日 2011-11-16 最終更新日 2019-07-17 実験手法 X-RAY DIFFRACTION (2.7003 Å) 主引用文献 A de novo peptide hexamer with a mutable channel. Nat.Chem.Biol., 7, 2011
2L69	Solution NMR Structure of de novo designed protein, P-loop NTPase fold, Northeast Structural Genomics Consortium Target OR28 分子名称: Rossmann 2x3 fold protein 著者 Liu, G, Koga, N, Koga, R, Xiao, R, Mao, A, Mao, B, Patel, D, Ciccosanti, C, Hamilton, K, Acton, T.B, Baker, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) 登録日 2010-11-17 公開日 2011-01-12 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution NMR structure of de novo designed rossmann 2x3 fold protein, Northeast Structural Genomics Consortium Target OR28 To be Published

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