PDB: 597 件ウェブページステータス検索Chemie searchBIRD

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2GXU	HERA N-terminal domain in complex with orthophosphate, crystal form 1 分子名称: PHOSPHATE ION, heat resistant RNA dependent ATPase 著者 Rudolph, M.G, Klostermeier, D. 登録日 2006-05-09 公開日 2006-08-22 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.67 Å) 主引用文献 Crystal Structure and Nucleotide Binding of the Thermus thermophilus RNA Helicase Hera N-terminal Domain. J.Mol.Biol., 351, 2006
3BER	Human DEAD-box RNA-helicase DDX47, conserved domain I in complex with AMP 分子名称: ADENOSINE MONOPHOSPHATE, PHOSPHATE ION, Probable ATP-dependent RNA helicase DDX47, ... 著者 Karlberg, T, Busam, R.D, Arrowsmith, C.H, Berglund, H, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, I, Kallas, A, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC) 登録日 2007-11-20 公開日 2007-12-04 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Comparative Structural Analysis of Human DEAD-Box RNA Helicases. Plos One, 5, 2010
3B7G	Human DEAD-box RNA helicase DDX20, Conserved domain I (DEAD) in complex with AMPPNP (Adenosine-(Beta,gamma)-imidotriphosphate) 分子名称: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Probable ATP-dependent RNA helicase DDX20 著者 Karlberg, T, Tresaugues, L, Arrowsmith, C.H, Berglund, H, Busam, R.D, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, I, Kallas, A, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Svensson, L, Thorsell, A.G, Van Den Berg, S, Weigelt, J, Welin, M, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC) 登録日 2007-10-30 公開日 2007-11-13 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Comparative Structural Analysis of Human DEAD-Box RNA Helicases. Plos One, 5, 2010
3LY5	DDX18 dead-domain 分子名称: ATP-dependent RNA helicase DDX18, MAGNESIUM ION, PHOSPHATE ION, ... 著者 Schutz, P, Karlberg, T, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kallas, A, Kraulis, P, Kotenyova, T, Kotzsch, A, Markova, N, Moche, M, Nielsen, T.K, Nordlund, P, Nyman, T, Persson, C, Roos, A.K, Siponen, M.I, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Wahlberg, E, Weigelt, J, Welin, M, Wisniewska, M, Schuler, H.M, Structural Genomics Consortium (SGC) 登録日 2010-02-26 公開日 2010-05-12 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Comparative Structural Analysis of Human DEAD-Box RNA Helicases. Plos One, 5, 2010
3P4X	Helicase domain of reverse gyrase from Thermotoga maritima 分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ... 著者 Rudolph, M.G, Klostermeier, D. 登録日 2010-10-07 公開日 2011-06-15 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.41 Å) 主引用文献 The Conformational Flexibility of the Helicase-like Domain from Thermotoga maritima Reverse Gyrase Is Restricted by the Topoisomerase Domain. Biochemistry, 50, 2011
3OIY	Helicase domain of reverse gyrase from Thermotoga maritima 分子名称: CHLORIDE ION, PYROPHOSPHATE 2-, reverse gyrase helicase domain 著者 Rudolph, M.G, Klostermeier, D. 登録日 2010-08-20 公開日 2010-12-01 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 The latch modulates nucleotide and DNA binding to the helicase-like domain of Thermotoga maritima reverse gyrase and is required for positive DNA supercoiling. Nucleic Acids Res., 39, 2011
3MWL	Q28E mutant of HERA N-terminal RecA-like domain in complex with 8-OXOADENOSINE 分子名称: 6-azanyl-9-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-7H-purin-8-one, Heat resistant RNA dependent ATPase, SULFATE ION 著者 Rudolph, M.G, Klostermeier, D. 登録日 2010-05-06 公開日 2011-03-23 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Changing nucleotide specificity of the DEAD-box helicase Hera abrogates communication between the Q-motif and the P-loop. Biol.Chem., 392, 2011
3MWJ	Q28E mutant of HERA N-terminal RecA-like domain, apo form 分子名称: Heat resistant RNA dependent ATPase, SULFATE ION 著者 Rudolph, M.G, Klostermeier, D. 登録日 2010-05-06 公開日 2011-03-23 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Changing nucleotide specificity of the DEAD-box helicase Hera abrogates communication between the Q-motif and the P-loop. Biol.Chem., 392, 2011
3MWK	Q28E mutant of HERA N-terminal RecA-like domain, complex with 8-oxo-AMP 分子名称: Heat resistant RNA dependent ATPase, SULFATE ION, [(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate 著者 Rudolph, M.G, Klostermeier, D. 登録日 2010-05-06 公開日 2011-03-23 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Changing nucleotide specificity of the DEAD-box helicase Hera abrogates communication between the Q-motif and the P-loop. Biol.Chem., 392, 2011
3FHC	Crystal structure of human Dbp5 in complex with Nup214 分子名称: ATP-dependent RNA helicase DDX19B, Nuclear pore complex protein Nup214 著者 von Moeller, H, Conti, E. 登録日 2008-12-09 公開日 2009-02-17 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 The mRNA export protein DBP5 binds RNA and the cytoplasmic nucleoporin NUP214 in a mutually exclusive manner Nat.Struct.Mol.Biol., 16, 2009
3FE2	Human DEAD-BOX RNA helicase DDX5 (P68), conserved domain I in complex with ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Probable ATP-dependent RNA helicase DDX5, ... 著者 Karlberg, T, Siponen, M.I, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Wikstrom, M, Wisniewska, M, Schuler, H, Structural Genomics Consortium (SGC) 登録日 2008-11-27 公開日 2008-12-16 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Comparative Structural Analysis of Human DEAD-Box RNA Helicases Plos One, 5, 2010
3FMO	Crystal structure of the nucleoporin Nup214 in complex with the DEAD-box helicase Ddx19 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DDX19B, GLYCEROL, ... 著者 Napetschnig, J, Debler, E.W, Blobel, G, Hoelz, A. 登録日 2008-12-22 公開日 2009-05-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 Structural and functional analysis of the interaction between the nucleoporin Nup214 and the DEAD-box helicase Ddx19. Proc.Natl.Acad.Sci.USA, 106, 2009
3DKP	Human DEAD-box RNA-helicase DDX52, conserved domain I in complex with ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ... 著者 Lehtio, L, Karlberg, T, Andersson, J, Arrowsmith, C.H, Berglund, H, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kotenyova, T, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Olesen, K, Persson, C, Sagemark, J, Thorsell, A.G, Tresaugues, L, van den Berg, S, Welin, M, Wisniewska, M, Wikstrom, M, Schueler, H, Structural Genomics Consortium (SGC) 登録日 2008-06-25 公開日 2008-08-12 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Comparative Structural Analysis of Human DEAD-Box RNA Helicases. Plos One, 5, 2010
7DTK	Crystal structure of the RecA1 domain of RNA helicase CGH-1 in C. elegans 分子名称: ATP-dependent RNA helicase cgh-1, GLYCEROL 著者 Hong, J.J, Lv, M.Q, Zhang, Y. 登録日 2021-01-05 公開日 2021-03-17 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.849 Å) 主引用文献 Structural and biochemical insights into the recognition of RNA helicase CGH-1 by CAR-1 in C. elegans. Biochem.Biophys.Res.Commun., 549, 2021
6AIC	Crystal structures of the N-terminal domain of Staphylococcus aureus DEAD-box Cold shock RNA helicase CshA in complex with AMP 分子名称: ADENOSINE MONOPHOSPHATE, DEAD-box ATP-dependent RNA helicase CshA 著者 Tian, T, Chengliang, W, Xiaobao, C, Xuan, Z, Jianye, Z. 登録日 2018-08-22 公開日 2018-11-21 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structures of the N-terminal domain of the Staphylococcus aureus DEAD-box RNA helicase CshA and its complex with AMP Acta Crystallogr F Struct Biol Commun, 74, 2018
5ZBZ	Crystal structure of the DEAD domain of Human eIF4A with sanguinarine 分子名称: 13-methyl[1,3]benzodioxolo[5,6-c][1,3]dioxolo[4,5-i]phenanthridin-13-ium, Eukaryotic initiation factor 4A-I, MALONATE ION 著者 Ding, Y, Ding, L. 登録日 2018-02-14 公開日 2019-02-20 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.30860257 Å) 主引用文献 Targeting the N Terminus of eIF4AI for Inhibition of Its Catalytic Recycling. Cell Chem Biol, 26, 2019
6AIB	Crystal structures of the N-terminal RecA-like domain 1 of Staphylococcus aureus DEAD-box Cold shock RNA helicase CshA 分子名称: DEAD-box ATP-dependent RNA helicase CshA 著者 Chengliang, W, Tian, T, Xiaobao, C, Xuan, Z, Jianye, Z. 登録日 2018-08-22 公開日 2018-11-21 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal structures of the N-terminal domain of the Staphylococcus aureus DEAD-box RNA helicase CshA and its complex with AMP Acta Crystallogr F Struct Biol Commun, 74, 2018
4W7S	Crystal structure of the yeast DEAD-box splicing factor Prp28 at 2.54 Angstroms resolution 分子名称: GLYCEROL, HEXAETHYLENE GLYCOL, MAGNESIUM ION, ... 著者 Jacewicz, A, Smith, P, Schwer, B, Shuman, S. 登録日 2014-08-22 公開日 2014-10-29 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.542 Å) 主引用文献 Crystal structure, mutational analysis and RNA-dependent ATPase activity of the yeast DEAD-box pre-mRNA splicing factor Prp28. Nucleic Acids Res., 42, 2014
3KX2	Crystal structure of Prp43p in complex with ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 著者 Nielsen, K.H, Andersen, G.R, He, Y. 登録日 2009-12-02 公開日 2010-01-26 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural basis for the function of DEAH helicases Embo Rep., 11, 2010
5OOQ	Structure of the Mtr4 Nop53 Complex 分子名称: ATP-dependent RNA helicase DOB1, Ribosome biogenesis protein NOP53, SULFATE ION 著者 Falk, S, Basquin, J, Conti, E. 登録日 2017-08-08 公開日 2017-09-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural insights into the interaction of the nuclear exosome helicase Mtr4 with the preribosomal protein Nop53. RNA, 23, 2017
5F9H	Crystal structure of RIG-I helicase-RD in complex with 24-mer 5' triphosphate hairpin RNA 分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Probable ATP-dependent RNA helicase DDX58, ... 著者 Wang, C, Marcotrigiano, J, Miller, M, Jiang, F. 登録日 2015-12-09 公開日 2016-01-13 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural basis for m7G recognition and 2'-O-methyl discrimination in capped RNAs by the innate immune receptor RIG-I. Proc.Natl.Acad.Sci.USA, 113, 2016
4XGT	Structure of RNA Helicase FRH a Critical Component of the Neurospora Crassa Circadian Clock 分子名称: FRQ-interacting RNA helicase 著者 Conrad, K.S, Crane, B.C. 登録日 2015-01-02 公開日 2016-07-06 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.09 Å) 主引用文献 Structure of the frequency-interacting RNA helicase: a protein interaction hub for the circadian clock. Embo J., 35, 2016
6QV4	Crystal structure of the Ski2 RNA-helicase Brr2 from Chaetomium thermophilum bound to ATP-gamma-S 分子名称: ACETATE ION, MANGANESE (II) ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... 著者 Absmeier, E, Santos, K.F, Wahl, M.C. 登録日 2019-03-01 公開日 2020-01-15 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Molecular Mechanism Underlying Inhibition of Intrinsic ATPase Activity in a Ski2-like RNA Helicase. Structure, 28, 2020
2DB3	Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa 分子名称: 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3', ATP-dependent RNA helicase vasa, MAGNESIUM ION, ... 著者 Sengoku, T, Nureki, O, Nakamura, A, Kobayashi, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-12-14 公開日 2006-05-02 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa. Cell(Cambridge,Mass.), 125, 2006
1WP9	Crystal structure of Pyrococcus furiosus Hef helicase domain 分子名称: ATP-dependent RNA helicase, putative, PHOSPHATE ION 著者 Nishino, T, Komori, K, Tsuchiya, D, Ishino, Y, Morikawa, K. 登録日 2004-08-31 公開日 2005-02-01 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Crystal Structure and Functional Implications of Pyrococcus furiosus Hef Helicase Domain Involved in Branched DNA Processing Structure, 13, 2005

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