PDB: 604 件ウェブページステータス検索Chemie searchBIRD

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5H1Y	Crystal structure of the DDX41 DEAD domain in complex with SO42- and Mg2+ 分子名称: MAGNESIUM ION, Probable ATP-dependent RNA helicase DDX41, SULFATE ION 著者 Jiang, Y, Ouyang, S, Liu, Z.J. 登録日 2016-10-13 公開日 2017-01-18 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 Structural and functional analyses of human DDX41 DEAD domain Protein Cell, 8, 2017
2GXU	HERA N-terminal domain in complex with orthophosphate, crystal form 1 分子名称: PHOSPHATE ION, heat resistant RNA dependent ATPase 著者 Rudolph, M.G, Klostermeier, D. 登録日 2006-05-09 公開日 2006-08-22 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.67 Å) 主引用文献 Crystal Structure and Nucleotide Binding of the Thermus thermophilus RNA Helicase Hera N-terminal Domain. J.Mol.Biol., 351, 2006
5GJU	DEAD-box RNA helicase 分子名称: ADENOSINE MONOPHOSPHATE, ATP-dependent RNA helicase DeaD 著者 Xu, L, Li, F, Wang, L, Shi, Y. 登録日 2016-07-02 公開日 2017-05-31 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Insights into the Structure of Dimeric RNA Helicase CsdA and Indispensable Role of Its C-Terminal Regions. Structure, 25, 2017
2G9N	Structure of the DEAD domain of Human eukaryotic initiation factor 4A, eIF4A 分子名称: Eukaryotic initiation factor 4A-I 著者 Hogbom, M, Ogg, D, Arrowsmith, C, Berglund, H, Collins, R, Edwards, A, Ehn, M, Flodin, S, Flores, A, Graslund, S, Hallberg, B.M, Hammarstrom, M, Kotenyova, T, Nilsson-Ehle, P, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Uppenberg, J, Van Den Berg, S, Weigelt, J, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC) 登録日 2006-03-07 公開日 2006-03-14 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Comparative Structural Analysis of Human DEAD-Box RNA Helicases. Plos One, 5, 2010
2GXS	HERA N-terminal domain in complex with AMP, crystal form 2 分子名称: ADENOSINE MONOPHOSPHATE, CALCIUM ION, GLYCEROL, ... 著者 Rudolph, M.G, Klostermeier, D. 登録日 2006-05-09 公開日 2006-08-22 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 Crystal Structure and Nucleotide Binding of the Thermus thermophilus RNA Helicase Hera N-terminal Domain. J.Mol.Biol., 351, 2006
3BER	Human DEAD-box RNA-helicase DDX47, conserved domain I in complex with AMP 分子名称: ADENOSINE MONOPHOSPHATE, PHOSPHATE ION, Probable ATP-dependent RNA helicase DDX47, ... 著者 Karlberg, T, Busam, R.D, Arrowsmith, C.H, Berglund, H, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, I, Kallas, A, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC) 登録日 2007-11-20 公開日 2007-12-04 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Comparative Structural Analysis of Human DEAD-Box RNA Helicases. Plos One, 5, 2010
3B7G	Human DEAD-box RNA helicase DDX20, Conserved domain I (DEAD) in complex with AMPPNP (Adenosine-(Beta,gamma)-imidotriphosphate) 分子名称: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Probable ATP-dependent RNA helicase DDX20 著者 Karlberg, T, Tresaugues, L, Arrowsmith, C.H, Berglund, H, Busam, R.D, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, I, Kallas, A, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Svensson, L, Thorsell, A.G, Van Den Berg, S, Weigelt, J, Welin, M, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC) 登録日 2007-10-30 公開日 2007-11-13 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Comparative Structural Analysis of Human DEAD-Box RNA Helicases. Plos One, 5, 2010
3FE2	Human DEAD-BOX RNA helicase DDX5 (P68), conserved domain I in complex with ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Probable ATP-dependent RNA helicase DDX5, ... 著者 Karlberg, T, Siponen, M.I, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Wikstrom, M, Wisniewska, M, Schuler, H, Structural Genomics Consortium (SGC) 登録日 2008-11-27 公開日 2008-12-16 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Comparative Structural Analysis of Human DEAD-Box RNA Helicases Plos One, 5, 2010
3FMO	Crystal structure of the nucleoporin Nup214 in complex with the DEAD-box helicase Ddx19 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DDX19B, GLYCEROL, ... 著者 Napetschnig, J, Debler, E.W, Blobel, G, Hoelz, A. 登録日 2008-12-22 公開日 2009-05-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 Structural and functional analysis of the interaction between the nucleoporin Nup214 and the DEAD-box helicase Ddx19. Proc.Natl.Acad.Sci.USA, 106, 2009
3FHC	Crystal structure of human Dbp5 in complex with Nup214 分子名称: ATP-dependent RNA helicase DDX19B, Nuclear pore complex protein Nup214 著者 von Moeller, H, Conti, E. 登録日 2008-12-09 公開日 2009-02-17 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 The mRNA export protein DBP5 binds RNA and the cytoplasmic nucleoporin NUP214 in a mutually exclusive manner Nat.Struct.Mol.Biol., 16, 2009
3IUY	Crystal structure of DDX53 DEAD-box domain 分子名称: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, Probable ATP-dependent RNA helicase DDX53 著者 Schutz, P, Karlberg, T, Collins, R, Arrowsmith, C.H, Berglund, H, Bountra, C, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kallas, A, Kraulis, P, Kotenyova, T, Kotzsch, A, Markova, N, Moche, M, Nielsen, T.K, Nordlund, P, Nyman, T, Persson, C, Roos, A.K, Siponen, M.I, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Wahlberg, E, Weigelt, J, Welin, M, Wisniewska, M, Schuler, H.M, Structural Genomics Consortium (SGC) 登録日 2009-08-31 公開日 2009-10-20 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Comparative Structural Analysis of Human DEAD-Box RNA Helicases. Plos One, 5, 2010
7DTK	Crystal structure of the RecA1 domain of RNA helicase CGH-1 in C. elegans 分子名称: ATP-dependent RNA helicase cgh-1, GLYCEROL 著者 Hong, J.J, Lv, M.Q, Zhang, Y. 登録日 2021-01-05 公開日 2021-03-17 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.849 Å) 主引用文献 Structural and biochemical insights into the recognition of RNA helicase CGH-1 by CAR-1 in C. elegans. Biochem.Biophys.Res.Commun., 549, 2021
4A4D	Crystal structure of the N-terminal domain of the Human DEAD-BOX RNA helicase DDX5 (P68) 分子名称: PROBABLE ATP-DEPENDENT RNA HELICASE DDX5 著者 Dutta, S, Choi, Y.W, Kotaka, M, Fielding, B.C, Tan, Y.J. 登録日 2011-10-11 公開日 2012-08-08 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 The Variable N-Terminal Region of Ddx5 Contains Structural Elements and Auto-Inhibits its Interaction with Ns5B of Hepatitis C Virus. Biochem.J., 446, 2012
6AIC	Crystal structures of the N-terminal domain of Staphylococcus aureus DEAD-box Cold shock RNA helicase CshA in complex with AMP 分子名称: ADENOSINE MONOPHOSPHATE, DEAD-box ATP-dependent RNA helicase CshA 著者 Tian, T, Chengliang, W, Xiaobao, C, Xuan, Z, Jianye, Z. 登録日 2018-08-22 公開日 2018-11-21 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structures of the N-terminal domain of the Staphylococcus aureus DEAD-box RNA helicase CshA and its complex with AMP Acta Crystallogr F Struct Biol Commun, 74, 2018
5ZBZ	Crystal structure of the DEAD domain of Human eIF4A with sanguinarine 分子名称: 13-methyl[1,3]benzodioxolo[5,6-c][1,3]dioxolo[4,5-i]phenanthridin-13-ium, Eukaryotic initiation factor 4A-I, MALONATE ION 著者 Ding, Y, Ding, L. 登録日 2018-02-14 公開日 2019-02-20 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.30860257 Å) 主引用文献 Targeting the N Terminus of eIF4AI for Inhibition of Its Catalytic Recycling. Cell Chem Biol, 26, 2019
6AIB	Crystal structures of the N-terminal RecA-like domain 1 of Staphylococcus aureus DEAD-box Cold shock RNA helicase CshA 分子名称: DEAD-box ATP-dependent RNA helicase CshA 著者 Chengliang, W, Tian, T, Xiaobao, C, Xuan, Z, Jianye, Z. 登録日 2018-08-22 公開日 2018-11-21 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal structures of the N-terminal domain of the Staphylococcus aureus DEAD-box RNA helicase CshA and its complex with AMP Acta Crystallogr F Struct Biol Commun, 74, 2018
8PNK	Crystal structure of the Ded1p RecA1 domain 分子名称: ATP-dependent RNA helicase DED1 著者 Huebner, J, Sprangers, R. 登録日 2023-06-30 公開日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of the Ded1p RecA1 domain To Be Published
1GL9	Archaeoglobus fulgidus reverse gyrase complexed with ADPNP 分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, REVERSE GYRASE 著者 Rodriguez, A.C, Stock, D. 登録日 2001-08-30 公開日 2002-02-11 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Crystal Structure of Reverse Gyrase: Insights Into the Positive Supercoiling of DNA. Embo J., 21, 2002
4W7S	Crystal structure of the yeast DEAD-box splicing factor Prp28 at 2.54 Angstroms resolution 分子名称: GLYCEROL, HEXAETHYLENE GLYCOL, MAGNESIUM ION, ... 著者 Jacewicz, A, Smith, P, Schwer, B, Shuman, S. 登録日 2014-08-22 公開日 2014-10-29 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.542 Å) 主引用文献 Crystal structure, mutational analysis and RNA-dependent ATPase activity of the yeast DEAD-box pre-mRNA splicing factor Prp28. Nucleic Acids Res., 42, 2014
2DB3	Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa 分子名称: 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3', ATP-dependent RNA helicase vasa, MAGNESIUM ION, ... 著者 Sengoku, T, Nureki, O, Nakamura, A, Kobayashi, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-12-14 公開日 2006-05-02 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa. Cell(Cambridge,Mass.), 125, 2006
1HV8	CRYSTAL STRUCTURE OF A DEAD BOX PROTEIN FROM THE HYPERTHERMOPHILE METHANOCOCCUS JANNASCHII 分子名称: PUTATIVE ATP-DEPENDENT RNA HELICASE MJ0669, SULFATE ION 著者 Story, R.M, Li, H, Abelson, J.N. 登録日 2001-01-08 公開日 2001-02-21 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal structure of a DEAD box protein from the hyperthermophile Methanococcus jannaschii. Proc.Natl.Acad.Sci.USA, 98, 2001
4DDT	Thermotoga maritima reverse gyrase, C2 FORM 2 分子名称: Reverse gyrase, ZINC ION 著者 Rudolph, M.G, Klostermeier, D. 登録日 2012-01-19 公開日 2012-12-26 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Crystal structures of Thermotoga maritima reverse gyrase: inferences for the mechanism of positive DNA supercoiling. Nucleic Acids Res., 41, 2013
4DDW	Thermotoga maritima reverse gyrase, c-centered orthorhombic form 分子名称: MAGNESIUM ION, PYROPHOSPHATE 2-, Reverse gyrase, ... 著者 Rudolph, M.G, Klostermeier, D. 登録日 2012-01-19 公開日 2012-12-26 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.9 Å) 主引用文献 Crystal structures of Thermotoga maritima reverse gyrase: inferences for the mechanism of positive DNA supercoiling. Nucleic Acids Res., 41, 2013
6O16	Crystal structure of murine DHX37 in complex with RNA 分子名称: DEAH (Asp-Glu-Ala-His) box polypeptide 37, RNA (5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') 著者 Boneberg, F, Brandmann, T, Kobel, L, van den Heuvel, J, Bargsten, K, Bammert, L, Kutay, U, Jinek, M. 登録日 2019-02-18 公開日 2019-04-17 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.875 Å) 主引用文献 Molecular mechanism of the RNA helicase DHX37 and its activation by UTP14A in ribosome biogenesis. Rna, 25, 2019
6O5F	Crystal structure of DEAD-box RNA helicase DDX3X at pre-unwound state 分子名称: ATP-dependent RNA helicase DDX3X, CHLORIDE ION, RNA (5'-R(P*CP*AP*AP*GP*GP*UP*CP*AP*UP*UP*CP*GP*CP*AP*AP*GP*AP*GP*UP*GP*GP*CP*C)-3') 著者 Song, H, Ji, X. 登録日 2019-03-02 公開日 2019-07-24 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.504 Å) 主引用文献 The mechanism of RNA duplex recognition and unwinding by DEAD-box helicase DDX3X. Nat Commun, 10, 2019

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