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4M3K
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BU of 4m3k by Molmil
Structure of a single domain camelid antibody fragment cAb-H7S in complex with the BlaP beta-lactamase from Bacillus licheniformis
分子名称: Beta-lactamase, CHLORIDE ION, Camelid heavy-chain antibody variable fragment cAb-H7S
著者Pain, C, Kerff, F, Herman, R, Sauvage, E, Preumont, S, Charlier, P, Dumoulin, M.
登録日2013-08-06
公開日2014-08-06
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Probing the mechanism of aggregation of polyQ model proteins with camelid heavy-chain antibody fragments
To be Published
6T7L
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BU of 6t7l by Molmil
Crystal structure of AmpC from E.coli with Nacubactam (OP0595)
分子名称: (2S,5R)-N-(2-aminoethoxy)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-lactamase, ...
著者Lang, P.A, Leissing, T.M, Schofield, C.J, Brem, J.
登録日2019-10-22
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Structural Investigations of the Inhibition of Escherichia coli AmpC beta-Lactamase by Diazabicyclooctanes.
Antimicrob.Agents Chemother., 65, 2021
6T35
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BU of 6t35 by Molmil
Crystal structure of AmpC from E.coli with Enmetazobactam (AAI-101)
分子名称: Beta-lactamase, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Lang, P.A, Leissing, T.M, Schofield, C.J, Brem, J.
登録日2019-10-10
公開日2020-11-18
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Studies on enmetazobactam clarify mechanisms of widely used beta-lactamase inhibitors.
Proc.Natl.Acad.Sci.USA, 119, 2022
8TTP
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BU of 8ttp by Molmil
Crystal structure of class C beta-lactamase from Escherichia coli in complex with avibactam
分子名称: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, 1,2-ETHANEDIOL, Beta-lactamase, ...
著者Chang, C, Maltseva, N, Endres, M, Joachimiak, A, Center for Structural Biology of Infectious Diseases (CSBID)
登録日2023-08-14
公開日2023-09-06
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Crystal structure of class C beta-lactamase from Escherichia coli in complex with avibactam
to be published
5LWF
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BU of 5lwf by Molmil
Structure of a single domain camelid antibody fragment cAb-G10S in complex with the BlaP beta-lactamase from Bacillus licheniformis
分子名称: ACETATE ION, Beta-lactamase, Camelid heavy-chain antibody variable fragment cAb-G10S
著者Vettore, N, Kerff, F, Pain, C, Herman, R, Sauvage, E, Preumont, S, Charlier, P, Dumoulin, M.
登録日2016-09-16
公開日2017-11-15
最終更新日2019-10-16
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Probing the mechanism of aggregation of polyQ model proteins with camelid heavy-chain antibody fragments
To Be Published
6PWL
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BU of 6pwl by Molmil
ADC-7 in complex with boronic acid transition state inhibitor LP06
分子名称: (7Z)-7-(2-amino-1,3-thiazol-4-yl)-1,1,3-trihydroxy-10,10-dimethyl-1,6-dioxo-2,9-dioxa-5,8-diaza-1lambda~5~-phospha-3-boraundec-7-en-11-oic acid, Beta-lactamase, GLYCINE
著者Curtis, B.C, Powers, R.A, Wallar, B.J.
登録日2019-07-23
公開日2020-10-21
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Structural Insights into Inhibition of the Acinetobacter-Derived Cephalosporinase ADC-7 by Ceftazidime and Its Boronic Acid Transition State Analog.
Antimicrob.Agents Chemother., 64, 2020
5JOC
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BU of 5joc by Molmil
Crystal structure of the S61A mutant of AmpC BER
分子名称: Beta-lactamase, CITRIC ACID
著者Na, J.H, An, Y.J, Cha, S.S.
登録日2016-05-02
公開日2017-05-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural basis for the extended substrate spectrum of AmpC BER and structure-guided discovery of the inhibition activity of citrate against the class C beta-lactamases AmpC BER and CMY-10.
Acta Crystallogr D Struct Biol, 72, 2016
5K1F
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BU of 5k1f by Molmil
Crystal structure of a class C beta lactamase/compound2 complex
分子名称: Beta-lactamase, CADMIUM ION, INOSINIC ACID
著者An, Y.J, Na, J.H, Cha, S.S.
登録日2016-05-18
公開日2017-05-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献GMP and IMP Are Competitive Inhibitors of CMY-10, an Extended-Spectrum Class C beta-Lactamase.
Antimicrob. Agents Chemother., 61, 2017
5K1D
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BU of 5k1d by Molmil
Crystal structure of a class C beta lactamase/compound1 complex
分子名称: Beta-lactamase, CADMIUM ION, GUANOSINE-5'-MONOPHOSPHATE
著者AN, Y.J, Na, J.H, Cha, S.S.
登録日2016-05-18
公開日2017-05-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献GMP and IMP Are Competitive Inhibitors of CMY-10, an Extended-Spectrum Class C beta-Lactamase.
Antimicrob. Agents Chemother., 61, 2017
7PU6
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BU of 7pu6 by Molmil
STRUCTURE OF ESTER-HYDROLASE EH7 FROM THE METAGENOME OF MARINE SEDIMENTS AT MILAZZO HARBOR (SICILY, ITALY) COMPLEXED WITH A DERIVATIVE OF OCTYL 4-NITROPHENYL HEXYLPHOSPHONATE
分子名称: Esterase, GLYCEROL, hexyl(octoxy)phosphinic acid
著者Cea Rama, I, Sanz-Aparicio, J.
登録日2021-09-28
公開日2022-07-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Crystal structure of a family VIII beta-lactamase fold hydrolase reveals the molecular mechanism for its broad substrate scope.
Febs J., 289, 2022
7PP3
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BU of 7pp3 by Molmil
STRUCTURE OF ESTER-HYDROLASE EH7 FROM THE METAGENOME OF MARINE SEDIMENTS AT MILAZZO HARBOR (SICILY, ITALY)
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Esterase, ...
著者Cea-Rama, I, Sanz-Aparicio, J.
登録日2021-09-13
公開日2022-07-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of a family VIII beta-lactamase fold hydrolase reveals the molecular mechanism for its broad substrate scope.
Febs J., 289, 2022
5WAD
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BU of 5wad by Molmil
ADC-7 in complex with boronic acid transition state inhibitor CR161
分子名称: Beta-lactamase, PHOSPHATE ION, phosphonooxy-[[[6-(1~{H}-1,2,3,4-tetrazol-5-yl)pyridin-3-yl]sulfonylamino]methyl]borinic acid
著者Powers, R.A, Wallar, B.J.
登録日2017-06-26
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structure-Based Analysis of Boronic Acids as Inhibitors of Acinetobacter-Derived Cephalosporinase-7, a Unique Class C beta-Lactamase.
ACS Infect Dis, 4, 2018
5WAF
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BU of 5waf by Molmil
ADC-7 in complex with boronic acid transition state inhibitor CR192
分子名称: Beta-lactamase, phosphonooxy-[[[4-(1~{H}-1,2,3,4-tetrazol-5-yl)-2-(trifluoromethyl)phenyl]sulfonylamino]methyl]borinic acid
著者Powers, R.A, Wallar, B.J.
登録日2017-06-26
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Structure-Based Analysis of Boronic Acids as Inhibitors of Acinetobacter-Derived Cephalosporinase-7, a Unique Class C beta-Lactamase.
ACS Infect Dis, 4, 2018
6DPX
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BU of 6dpx by Molmil
X-ray crystal structure of AmpC beta-lactamase with inhibitor
分子名称: (3-{[(3-chloro-2-hydroxyphenyl)sulfonyl]amino}phenyl)acetic acid, Beta-lactamase
著者Singh, I.
登録日2018-06-09
公開日2018-07-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Ultra-large library docking for discovering new chemotypes.
Nature, 566, 2019
7MQN
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BU of 7mqn by Molmil
Crystal structure of class C beta lactamase from Rhodobacter sphaeroides
分子名称: Beta-lactamase, PHOSPHATE ION
著者Chang, C, Tesar, C, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-05-05
公開日2021-05-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Crystal structure of class C beta lactamase from Rhodobacter sphaeroides
To Be Published
6I30
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BU of 6i30 by Molmil
Crystal structure of the AmpC from Pseudomonas aeruginosa with 1C
分子名称: (3R)-3-(cyclohexylcarbonylamino)-2-oxidanyl-3,4-dihydro-1,2-benzoxaborinine-8-carboxylic acid, Class C beta-lactamase PDC-301
著者Brem, J, Cahill, S.T, McDonough, M.A, Schofield, C.J.
登録日2018-11-02
公開日2019-02-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Studies on the inhibition of AmpC and other beta-lactamases by cyclic boronates.
Biochim Biophys Acta Gen Subj, 1863, 2019
5XHR
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BU of 5xhr by Molmil
Crystal structure of P99 beta-lactamase in complex with a penicillin derivative MPC-1
分子名称: (2~{R},4~{S})-5,5-dimethyl-2-[(2~{S},3~{R})-3-oxidanyl-1-oxidanylidene-5-thiophen-2-yl-pentan-2-yl]-1,3-thiazolidine-4-carboxylic acid, Beta-lactamase
著者Pan, X, Zhao, Y.
登録日2017-04-24
公開日2017-09-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Modified Penicillin Molecule with Carbapenem-Like Stereochemistry Specifically Inhibits Class C beta-Lactamases
Antimicrob. Agents Chemother., 61, 2017
7MDC
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BU of 7mdc by Molmil
Full-length wildtype ClbP inhibited by hexanoyl-D-asparagine boronic acid
分子名称: (2S)-2,3-dihydroxypropyl (9Z)-hexadec-9-enoate, Beta-lactamase, CHLORIDE ION, ...
著者Velilla, J.A, Volpe, M.R, Gaudet, R.
登録日2021-04-03
公開日2022-09-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A small molecule inhibitor prevents gut bacterial genotoxin production.
Nat.Chem.Biol., 19, 2023
7MDE
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BU of 7mde by Molmil
Full-length S95A ClbP
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Beta-lactamase, CHLORIDE ION, ...
著者Velilla, J.A, Volpe, M.R, Gaudet, R.
登録日2021-04-04
公開日2022-09-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of colibactin activation by the ClbP peptidase.
Nat.Chem.Biol., 19, 2023
7MDF
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BU of 7mdf by Molmil
Full-length S95A ClbP bound to N-acyl-D-asparagine analog
分子名称: (2S)-2,3-dihydroxypropyl (9Z)-hexadec-9-enoate, Beta-lactamase, CHLORIDE ION, ...
著者Velilla, J.A, Volpe, M.R, Gaudet, R.
登録日2021-04-04
公開日2022-09-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of colibactin activation by the ClbP peptidase.
Nat.Chem.Biol., 19, 2023
7PP8
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BU of 7pp8 by Molmil
STRUCTURE OF ESTER-HYDROLASE EH7 FROM METAGENOME OF MARINE SEDIMENTS AT MILAZZO HARBOR (SICILY, ITALY) COMPLEXED WITH A DERIVATIVE OF METHYL 4-NITROPHENYL HEXYLPHOSPHONATE
分子名称: DI(HYDROXYETHYL)ETHER, Esterase, GLYCEROL, ...
著者Cea-Rama, I, Sanz-Aparicio, J.
登録日2021-09-13
公開日2022-07-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Crystal structure of a family VIII beta-lactamase fold hydrolase reveals the molecular mechanism for its broad substrate scope.
Febs J., 289, 2022
5WAC
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BU of 5wac by Molmil
ADC-7 in complex with boronic acid transition state inhibitor CR157
分子名称: Beta-lactamase, phosphonooxy-[[[4-(1~{H}-1,2,3,4-tetrazol-5-yl)phenyl]sulfonylamino]methyl]borinic acid
著者Powers, R.A, Wallar, B.J.
登録日2017-06-26
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.061 Å)
主引用文献Structure-Based Analysis of Boronic Acids as Inhibitors of Acinetobacter-Derived Cephalosporinase-7, a Unique Class C beta-Lactamase.
ACS Infect Dis, 4, 2018
5WAG
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BU of 5wag by Molmil
ADC-7 in complex with boronic acid transition state inhibitor S06017
分子名称: 1-{[hydroxy(phosphonooxy)boranyl]methyl}-1H-1,2,3-triazole-4-carboxylic acid, Beta-lactamase, SUCCINIC ACID
著者Powers, R.A, Wallar, B.J.
登録日2017-06-26
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.931 Å)
主引用文献Structure-Based Analysis of Boronic Acids as Inhibitors of Acinetobacter-Derived Cephalosporinase-7, a Unique Class C beta-Lactamase.
ACS Infect Dis, 4, 2018
5ZFL
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BU of 5zfl by Molmil
Crystal structure of beta-lactamase PenP mutant E166Y
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-lactamase
著者Pan, X, Zhao, Y.
登録日2018-03-06
公開日2019-03-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The hydrolytic water molecule of Class A beta-lactamase relies on the acyl-enzyme intermediate ES* for proper coordination and catalysis.
Sci Rep, 10, 2020
5ZG6
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BU of 5zg6 by Molmil
Crystal structure of beta-lactamase PenP mutant-E166Y in complex with cephaloridine as "post-acylation" intermediate
分子名称: 5-METHYL-2-[2-OXO-1-(2-THIOPHEN-2-YL-ACETYLAMINO)-ETHYL]-3,6-DIHYDRO-2H-[1,3]THIAZINE-4-CARBOXYLIC ACID, Beta-lactamase
著者Pan, X, Zhao, Y.
登録日2018-03-07
公開日2019-03-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The hydrolytic water molecule of Class A beta-lactamase relies on the acyl-enzyme intermediate ES* for proper coordination and catalysis.
Sci Rep, 10, 2020

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件を2024-09-11に公開中

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